RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 C9JAW5 83 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 GNRH2O43555 120 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 DEFB130BP0DP73 79 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 DEFB130AP0DP74 79 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 CRYGAP11844 174 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 PLNP26678 52 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 TMEM258P61165 79 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 PAPPA-AS1Q5QFB9 102 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 C15orf53Q8NAA6 179 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 NEXN-AS1Q8NBZ9 246 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 MUC7Q8TAX7 377 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 BAALCQ8WXS3 180 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 TMEM101Q96IK0 257 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 CARD19Q96LW7 228 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 C18orf15Q96N68 181 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 HHLA3Q9XRX5 114 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 TRAV10A0A0B4J240 114 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 IGKV3D-20A0A0C4DH25 116 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 C3orf84H3BNL1 204 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 H3BVH4 76 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 K7EMI3 77 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 SPINK4O60575 86 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 DPM2O94777 84 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 IGKCP01834 107 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 PRM2P04554 102 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 P0DMU3 169 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 FAM231AP0DMU4 169 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 FAM231CP0DMU5 169 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 CXCL5P42830 114 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 NMUP48645 174 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 CRIP1P50238 77 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 NANOS2P60321 138 aaKnown RBP4.38□□□□□ -1.71
SF3B1-209ENST00000479532 Q6ZQT7 251 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 ORMDL3Q8N138 153 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 C3orf22Q8N5N4 141 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 C11orf72Q8NBR9 251 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 NXT2Q9NPJ8 142 aaKnown RBP4.38□□□□□ -1.71
SF3B1-209ENST00000479532 CELA1Q9UNI1 258 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 KLK5Q9Y337 293 aaPredicted RBP4.38□□□□□ -1.71
SF3B1-209ENST00000479532 PHLDA3Q9Y5J5 127 aa4.38□□□□□ -1.71
SF3B1-209ENST00000479532 DNAH9Q9NYC9 4486 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 DEFB131BA0A096LNP1 70 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 TRAV12-1A0A0B4J245 112 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 PLAC8L1A1L4L8 177 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 F5H768 121 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 ARMS2P0C7Q2 107 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 HTN3P15516 51 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 CACNG7P62955 275 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 ZNF876PQ49A33 203 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 TMEM170BQ5T4T1 132 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 SPANXN1Q5VSR9 72 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 Q6ZTC4 211 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 FAM19A5Q7Z5A7 132 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-209ENST00000479532 PCP2Q8IVA1 136 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 C9orf85Q96MD7 179 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 KIR2DL4Q99706 377 aa4.37□□□□□ -1.71
SF3B1-209ENST00000479532 NAA38Q9BRA0 125 aaKnown RBP4.37□□□□□ -1.71
SF3B1-209ENST00000479532 TRAV4A0A0B4J268 109 aa4.36□□□□□ -1.71
SF3B1-209ENST00000479532 TRGV4A0A0C4DH28 118 aa4.36□□□□□ -1.71
SF3B1-209ENST00000479532 NDUFC2-KCTD14E9PQ53 114 aa4.36□□□□□ -1.71
SF3B1-209ENST00000479532 H3BT86 120 aa4.36□□□□□ -1.71
SF3B1-209ENST00000479532 RNASE3P12724 160 aaKnown RBP4.36□□□□□ -1.71
SF3B1-209ENST00000479532 FCER1GP30273 86 aa4.36□□□□□ -1.71
SF3B1-209ENST00000479532 Q6ZTI0 123 aa4.36□□□□□ -1.71
SF3B1-209ENST00000479532 LINC00612Q8N6U2 182 aa4.36□□□□□ -1.71
SF3B1-209ENST00000479532 PRR26Q8N8Z3 221 aa4.36□□□□□ -1.71
SF3B1-209ENST00000479532 PRO0628Q9UI54 55 aa4.36□□□□□ -1.71
SF3B1-209ENST00000479532 HUWE1Q7Z6Z7 4374 aaKnown RBP4.36□□□□□ -1.71
SF3B1-209ENST00000479532 TRAV8-4A0A0B4J246 113 aa4.35□□□□□ -1.71
SF3B1-209ENST00000479532 K7ERJ3 54 aa4.35□□□□□ -1.71
SF3B1-209ENST00000479532 M0R381 172 aa4.35□□□□□ -1.71
SF3B1-209ENST00000479532 VPREB1P12018 145 aa4.35□□□□□ -1.71
SF3B1-209ENST00000479532 SEC61BP60468 96 aaKnown RBP4.35□□□□□ -1.71
SF3B1-209ENST00000479532 CEMP1Q6PRD7 247 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-209ENST00000479532 ANKRD29Q8N6D5 301 aa4.35□□□□□ -1.71
SF3B1-209ENST00000479532 HIST1H4GQ99525 98 aa4.35□□□□□ -1.71
SF3B1-209ENST00000479532 RS1O15537 224 aa4.34□□□□□ -1.71
SF3B1-209ENST00000479532 SLC25A20O43772 301 aa4.34□□□□□ -1.71
SF3B1-209ENST00000479532 IGHV3-53P01767 116 aa4.34□□□□□ -1.71
SF3B1-209ENST00000479532 IGLC6P0CF74 106 aa4.34□□□□□ -1.71
SF3B1-209ENST00000479532 C9orf153Q5TBE3 101 aa4.34□□□□□ -1.71
SF3B1-209ENST00000479532 FAM104BQ5XKR9 115 aa4.34□□□□□ -1.71
SF3B1-209ENST00000479532 SDIM1Q6ZPB5 146 aa4.34□□□□□ -1.71
SF3B1-209ENST00000479532 C10orf126Q8N4M7 172 aa4.34□□□□□ -1.71
SF3B1-209ENST00000479532 CNFNQ9BYD5 112 aa4.34□□□□□ -1.71
SF3B1-209ENST00000479532 NBEAL2Q6ZNJ1 2754 aa4.34□□□□□ -1.72
SF3B1-209ENST00000479532 IGHV4-4A0A075B6R2 117 aa4.33□□□□□ -1.72
SF3B1-209ENST00000479532 A0A0B4J2C4 111 aa4.33□□□□□ -1.72
SF3B1-209ENST00000479532 ATOX1O00244 68 aa4.33□□□□□ -1.72
SF3B1-209ENST00000479532 LINC00694P0DN24 101 aa4.33□□□□□ -1.72
SF3B1-209ENST00000479532 COX7CP15954 63 aa4.33□□□□□ -1.72
SF3B1-209ENST00000479532 HERVK_113P63121 156 aa4.33□□□□□ -1.72
SF3B1-209ENST00000479532 CASC10Q5T4H9 136 aa4.33□□□□□ -1.72
SF3B1-209ENST00000479532 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
SF3B1-209ENST00000479532 FAM74A4Q5TZK3 123 aa4.33□□□□□ -1.72
SF3B1-209ENST00000479532 LYZL1Q6UWQ5 148 aa4.33□□□□□ -1.72
SF3B1-209ENST00000479532 ZFP2Q6ZN57 461 aa4.33□□□□□ -1.72
SF3B1-209ENST00000479532 AMN1Q8IY45 258 aa4.33□□□□□ -1.72
SF3B1-209ENST00000479532 POM121L12Q8N7R1 296 aa4.33□□□□□ -1.72
SF3B1-209ENST00000479532 PGLYRP4Q96LB8 373 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms