RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 ADIRFQ15847 76 aa4.12□□□□□ -1.75
HOXB3-209ENST00000478644 IQCJQ1A5X6 159 aa4.12□□□□□ -1.75
HOXB3-209ENST00000478644 Q6ZN92 141 aa4.12□□□□□ -1.75
HOXB3-209ENST00000478644 NTM-AS1Q6ZSK4 140 aa4.12□□□□□ -1.75
HOXB3-209ENST00000478644 GATD1Q8NB37 220 aa4.12□□□□□ -1.75
HOXB3-209ENST00000478644 NUP35Q8NFH5 326 aa4.12□□□□□ -1.75
HOXB3-209ENST00000478644 BORCS7Q96B45 105 aa4.12□□□□□ -1.75
HOXB3-209ENST00000478644 CHAC1Q9BUX1 264 aa4.12□□□□□ -1.75
HOXB3-209ENST00000478644 TMEM191AQ9H0A3 160 aa4.12□□□□□ -1.75
HOXB3-209ENST00000478644 NAT8BQ9UHF3 227 aa4.12□□□□□ -1.75
HOXB3-209ENST00000478644 KLK12Q9UKR0 248 aa4.12□□□□□ -1.75
HOXB3-209ENST00000478644 PKIGQ9Y2B9 76 aa4.12□□□□□ -1.75
HOXB3-209ENST00000478644 SRRM2Q9UQ35 2752 aaKnown RBP4.11□□□□□ -1.75
HOXB3-209ENST00000478644 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.11□□□□□ -1.75
HOXB3-209ENST00000478644 UBE2WQ96B02 151 aa4.11□□□□□ -1.75
HOXB3-209ENST00000478644 CHCHD5Q9BSY4 110 aa4.11□□□□□ -1.75
HOXB3-209ENST00000478644 TRAV26-2A0A0B4J265 109 aa4.1□□□□□ -1.75
HOXB3-209ENST00000478644 IGHV1-24A0A0C4DH33 117 aa4.1□□□□□ -1.75
HOXB3-209ENST00000478644 TRBV6-5A0A0K0K1A5 114 aa4.1□□□□□ -1.75
HOXB3-209ENST00000478644 ANGP03950 147 aaKnown RBP4.1□□□□□ -1.75
HOXB3-209ENST00000478644 CD164Q04900 197 aa4.1□□□□□ -1.75
HOXB3-209ENST00000478644 MRAP2Q96G30 205 aa4.1□□□□□ -1.75
HOXB3-209ENST00000478644 RNF185Q96GF1 192 aa4.1□□□□□ -1.75
HOXB3-209ENST00000478644 PRR34Q9NV39 138 aa4.1□□□□□ -1.75
HOXB3-209ENST00000478644 VPS13BQ7Z7G8 4022 aa4.1□□□□□ -1.75
HOXB3-209ENST00000478644 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.09□□□□□ -1.75
HOXB3-209ENST00000478644 TMEM218A2RU14 115 aa4.09□□□□□ -1.75
HOXB3-209ENST00000478644 H7C423 109 aa4.09□□□□□ -1.75
HOXB3-209ENST00000478644 NCR2O95944 276 aa4.09□□□□□ -1.75
HOXB3-209ENST00000478644 PPP1R17O96001 155 aa4.09□□□□□ -1.75
HOXB3-209ENST00000478644 RBX1P62877 108 aa4.09□□□□□ -1.75
HOXB3-209ENST00000478644 RPL18AQ02543 176 aaKnown RBP4.09□□□□□ -1.75
HOXB3-209ENST00000478644 C9orf163Q8N9P6 203 aa4.09□□□□□ -1.75
HOXB3-209ENST00000478644 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
HOXB3-209ENST00000478644 DMBT1Q9UGM3 2413 aaPredicted RBP4.09□□□□□ -1.76
HOXB3-209ENST00000478644 A0A1B0GXF2 115 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 LINC00862A6NCI5 91 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 SDHAF1A6NFY7 115 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 I3L3M4 83 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 UBE2L6O14933 153 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 GAS8-AS1O95177 125 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 MT-ND4LP03901 98 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 S100A8P05109 93 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 G0S2P27469 103 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 POLR2KP53803 58 aaKnown RBP4.08□□□□□ -1.76
HOXB3-209ENST00000478644 SMAGPQ0VAQ4 97 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 MPV17L2Q567V2 206 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 FAM104BQ5XKR9 115 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 ENHOQ6UWT2 76 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 ATP5L2Q7Z4Y8 100 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 AMN1Q8IY45 258 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 RPL39LQ96EH5 51 aaKnown RBP4.08□□□□□ -1.76
HOXB3-209ENST00000478644 HIST1H4GQ99525 98 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 TMEM243Q9BU79 118 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 OCR1Q9BZK8 76 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 ST20Q9HBF5 79 aa4.08□□□□□ -1.76
HOXB3-209ENST00000478644 TRBV24-1A0A075B6N3 115 aa4.07□□□□□ -1.76
HOXB3-209ENST00000478644 TRBV27A0A0K0K1C4 114 aa4.07□□□□□ -1.76
HOXB3-209ENST00000478644 SMIM1B2RUZ4 78 aa4.07□□□□□ -1.76
HOXB3-209ENST00000478644 F8W036 122 aa4.07□□□□□ -1.76
HOXB3-209ENST00000478644 LECT2O14960 151 aa4.07□□□□□ -1.76
HOXB3-209ENST00000478644 PFN2P35080 140 aa4.07□□□□□ -1.76
HOXB3-209ENST00000478644 FUSP35637 526 aaKnown RBP eCLIP4.07□□□□□ -1.76
HOXB3-209ENST00000478644 RPS10P46783 165 aaKnown RBP4.07□□□□□ -1.76
HOXB3-209ENST00000478644 CNBPP62633 177 aaKnown RBP4.07□□□□□ -1.76
HOXB3-209ENST00000478644 RPL32P62910 135 aaKnown RBP4.07□□□□□ -1.76
HOXB3-209ENST00000478644 HBBP68871 147 aa4.07□□□□□ -1.76
HOXB3-209ENST00000478644 MRPL51Q4U2R6 128 aaKnown RBP4.07□□□□□ -1.76
HOXB3-209ENST00000478644 SCXQ7RTU7 201 aa4.07□□□□□ -1.76
HOXB3-209ENST00000478644 CIRBP-AS1Q8TBR5 109 aa4.07□□□□□ -1.76
HOXB3-209ENST00000478644 IMMP2LQ96T52 175 aa4.07□□□□□ -1.76
HOXB3-209ENST00000478644 LINC00474Q9P2X8 69 aa4.07□□□□□ -1.76
HOXB3-209ENST00000478644 IGHV3-64A0A075B6Q5 118 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 LOC105371267A0A1B0GV96 52 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 TMEM238C9JI98 176 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 CCL25O15444 150 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 PPBPP02775 128 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 ESDP10768 282 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 ADCYAP1P18509 176 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 REG3AQ06141 175 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 C10orf91Q5T1B1 145 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 Q6ZRP5 223 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 Q6ZRU5 148 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 LINC00269Q8N2A0 174 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 C20orf203Q8NBC4 194 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 CHCHD10Q8WYQ3 142 aaPredicted RBP4.06□□□□□ -1.76
HOXB3-209ENST00000478644 C20orf78Q9BR46 151 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 SEC11CQ9BY50 192 aa4.06□□□□□ -1.76
HOXB3-209ENST00000478644 IGLV4-60A0A075B6I1 120 aa4.05□□□□□ -1.76
HOXB3-209ENST00000478644 FAM240AA0A1B0GVK7 77 aa4.05□□□□□ -1.76
HOXB3-209ENST00000478644 PHOX2AO14813 284 aa4.05□□□□□ -1.76
HOXB3-209ENST00000478644 HLA-DQA1P01909 254 aa4.05□□□□□ -1.76
HOXB3-209ENST00000478644 APCSP02743 223 aa4.05□□□□□ -1.76
HOXB3-209ENST00000478644 ZNF25P17030 456 aaPredicted RBP4.05□□□□□ -1.76
HOXB3-209ENST00000478644 CKS2P33552 79 aa4.05□□□□□ -1.76
HOXB3-209ENST00000478644 RPL37AP61513 92 aaKnown RBP4.05□□□□□ -1.76
HOXB3-209ENST00000478644 WFDC2Q14508 124 aa4.05□□□□□ -1.76
HOXB3-209ENST00000478644 MRPL54Q6P161 138 aaKnown RBP4.05□□□□□ -1.76
HOXB3-209ENST00000478644 KRTAP26-1Q6PEX3 210 aa4.05□□□□□ -1.76
HOXB3-209ENST00000478644 MRPL55Q7Z7F7 128 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms