RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 E9PLD3 99 aa3.18□□□□□ -1.9
ITGA4-209ENST00000478440 CXCL1P09341 107 aa3.18□□□□□ -1.9
ITGA4-209ENST00000478440 OR5AL1P0C617 328 aa3.18□□□□□ -1.9
ITGA4-209ENST00000478440 TRGC1P0CF51 173 aa3.18□□□□□ -1.9
ITGA4-209ENST00000478440 XCL1P47992 114 aa3.18□□□□□ -1.9
ITGA4-209ENST00000478440 EIF5AP63241 154 aaKnown RBP3.18□□□□□ -1.9
ITGA4-209ENST00000478440 RPL7L1Q6DKI1 246 aaKnown RBP3.18□□□□□ -1.9
ITGA4-209ENST00000478440 KRTAP26-1Q6PEX3 210 aa3.18□□□□□ -1.9
ITGA4-209ENST00000478440 RASL11AQ6T310 242 aa3.18□□□□□ -1.9
ITGA4-209ENST00000478440 ZNF664Q8N3J9 261 aa3.18□□□□□ -1.9
ITGA4-209ENST00000478440 C15orf56Q8N910 161 aa3.18□□□□□ -1.9
ITGA4-209ENST00000478440 CHCHD10Q8WYQ3 142 aaPredicted RBP3.18□□□□□ -1.9
ITGA4-209ENST00000478440 ISOC2Q96AB3 205 aa3.18□□□□□ -1.9
ITGA4-209ENST00000478440 TMEM101Q96IK0 257 aa3.18□□□□□ -1.9
ITGA4-209ENST00000478440 SNAI2O43623 268 aa3.17□□□□□ -1.9
ITGA4-209ENST00000478440 APCSP02743 223 aa3.17□□□□□ -1.9
ITGA4-209ENST00000478440 UBE2D1P51668 147 aa3.17□□□□□ -1.9
ITGA4-209ENST00000478440 RPS20P60866 119 aaKnown RBP3.17□□□□□ -1.9
ITGA4-209ENST00000478440 RPL18AQ02543 176 aaKnown RBP3.17□□□□□ -1.9
ITGA4-209ENST00000478440 SS18Q15532 418 aa3.17□□□□□ -1.9
ITGA4-209ENST00000478440 PP632Q6XCG6 107 aa3.17□□□□□ -1.9
ITGA4-209ENST00000478440 SMIM15Q7Z3B0 74 aa3.17□□□□□ -1.9
ITGA4-209ENST00000478440 OR2D3Q8NGH3 330 aa3.17□□□□□ -1.9
ITGA4-209ENST00000478440 FAM213BQ8TBF2 198 aa3.17□□□□□ -1.9
ITGA4-209ENST00000478440 MARVELD1Q9BSK0 173 aa3.17□□□□□ -1.9
ITGA4-209ENST00000478440 CYTL1Q9NRR1 136 aa3.17□□□□□ -1.9
ITGA4-209ENST00000478440 HMCN2Q8NDA2 5059 aa3.17□□□□□ -1.9
ITGA4-209ENST00000478440 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.16□□□□□ -1.9
ITGA4-209ENST00000478440 GVQW2A0A096LPI5 108 aaPredicted RBP3.16□□□□□ -1.9
ITGA4-209ENST00000478440 IGHV1-58A0A0C4DH39 117 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 LOC107984640A0A0U1RRK4 108 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 IGKV2-29A2NJV5 120 aaPredicted RBP3.16□□□□□ -1.9
ITGA4-209ENST00000478440 M0QY20 66 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 CCL25O15444 150 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 IFNA1P01562 189 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 SYCNQ0VAF6 134 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 ZNF726P1Q15940 193 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 C1orf137Q5JT78 98 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 EIF5AL1Q6IS14 154 aaKnown RBP3.16□□□□□ -1.9
ITGA4-209ENST00000478440 OR5A1Q8NGJ0 315 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 SFT2D1Q8WV19 159 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 DIRC1Q969H9 104 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 LINC00526Q96FQ7 95 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 PGLYRP4Q96LB8 373 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 NIT2Q9NQR4 276 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 PSORS1C2Q9UIG4 136 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 ALG5Q9Y673 324 aa3.16□□□□□ -1.9
ITGA4-209ENST00000478440 TRAV1-1A0A0B4J248 108 aa3.15□□□□□ -1.91
ITGA4-209ENST00000478440 F2Z2F3 143 aa3.15□□□□□ -1.91
ITGA4-209ENST00000478440 FGF6P10767 208 aa3.15□□□□□ -1.91
ITGA4-209ENST00000478440 PMCHP20382 165 aa3.15□□□□□ -1.91
ITGA4-209ENST00000478440 KCNRGQ8N5I3 272 aa3.15□□□□□ -1.91
ITGA4-209ENST00000478440 CAMK2N2Q96S95 79 aa3.15□□□□□ -1.91
ITGA4-209ENST00000478440 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
ITGA4-209ENST00000478440 ARPC5O15511 151 aa3.14□□□□□ -1.91
ITGA4-209ENST00000478440 GIPP09681 153 aaPredicted RBP3.14□□□□□ -1.91
ITGA4-209ENST00000478440 BCL2P10415 239 aa3.14□□□□□ -1.91
ITGA4-209ENST00000478440 ZNF25P17030 456 aaPredicted RBP3.14□□□□□ -1.91
ITGA4-209ENST00000478440 RPL35P42766 123 aaKnown RBP3.14□□□□□ -1.91
ITGA4-209ENST00000478440 GNG4P50150 75 aa3.14□□□□□ -1.91
ITGA4-209ENST00000478440 UBE2BP63146 152 aa3.14□□□□□ -1.91
ITGA4-209ENST00000478440 CENPWQ5EE01 88 aa3.14□□□□□ -1.91
ITGA4-209ENST00000478440 LYZL1Q6UWQ5 148 aa3.14□□□□□ -1.91
ITGA4-209ENST00000478440 LINC00299Q6ZSB3 139 aa3.14□□□□□ -1.91
ITGA4-209ENST00000478440 TSKUQ8WUA8 353 aa3.14□□□□□ -1.91
ITGA4-209ENST00000478440 BIN3Q9NQY0 253 aa3.14□□□□□ -1.91
ITGA4-209ENST00000478440 LRP2P98164 4655 aa3.13□□□□□ -1.91
ITGA4-209ENST00000478440 RNF213Q63HN8 5207 aa3.13□□□□□ -1.91
ITGA4-209ENST00000478440 IGLV4-69A0A075B6H9 119 aa3.13□□□□□ -1.91
ITGA4-209ENST00000478440 TEX46H3BTG2 121 aa3.13□□□□□ -1.91
ITGA4-209ENST00000478440 COX7A2LO14548 114 aa3.13□□□□□ -1.91
ITGA4-209ENST00000478440 APOMO95445 188 aa3.13□□□□□ -1.91
ITGA4-209ENST00000478440 NCR2O95944 276 aa3.13□□□□□ -1.91
ITGA4-209ENST00000478440 NTF3P20783 257 aa3.13□□□□□ -1.91
ITGA4-209ENST00000478440 SMAGPQ0VAQ4 97 aa3.13□□□□□ -1.91
ITGA4-209ENST00000478440 BORCS7Q96B45 105 aa3.13□□□□□ -1.91
ITGA4-209ENST00000478440 MRAP2Q96G30 205 aa3.13□□□□□ -1.91
ITGA4-209ENST00000478440 GNG13Q9P2W3 67 aa3.13□□□□□ -1.91
ITGA4-209ENST00000478440 IGLV1-50A0A075B6I6 118 aa3.12□□□□□ -1.91
ITGA4-209ENST00000478440 LINC00959A0A1B0GUT2 108 aa3.12□□□□□ -1.91
ITGA4-209ENST00000478440 KANTRA0A1W2PQU2 76 aa3.12□□□□□ -1.91
ITGA4-209ENST00000478440 SDHAF1A6NFY7 115 aa3.12□□□□□ -1.91
ITGA4-209ENST00000478440 UMAD1C9J7I0 102 aa3.12□□□□□ -1.91
ITGA4-209ENST00000478440 FCER1GP30273 86 aa3.12□□□□□ -1.91
ITGA4-209ENST00000478440 RPL13AP40429 203 aaKnown RBP3.12□□□□□ -1.91
ITGA4-209ENST00000478440 IFITM3Q01628 133 aa3.12□□□□□ -1.91
ITGA4-209ENST00000478440 SPAG11BQ08648 103 aa3.12□□□□□ -1.91
ITGA4-209ENST00000478440 C9orf116Q5BN46 136 aaPredicted RBP3.12□□□□□ -1.91
ITGA4-209ENST00000478440 TEX261Q6UWH6 196 aa3.12□□□□□ -1.91
ITGA4-209ENST00000478440 PHF5AQ7RTV0 110 aaKnown RBP3.12□□□□□ -1.91
ITGA4-209ENST00000478440 FAM19A5Q7Z5A7 132 aaPredicted RBP3.12□□□□□ -1.91
ITGA4-209ENST00000478440 RPL39LQ96EH5 51 aaKnown RBP3.12□□□□□ -1.91
ITGA4-209ENST00000478440 MANBALQ9NQG1 85 aa3.12□□□□□ -1.91
ITGA4-209ENST00000478440 TRAV13-1A0A0B4J241 112 aa3.11□□□□□ -1.91
ITGA4-209ENST00000478440 C7orf77A4D0Y5 90 aa3.11□□□□□ -1.91
ITGA4-209ENST00000478440 C1orf196B1AJZ1 125 aa3.11□□□□□ -1.91
ITGA4-209ENST00000478440 I3L3M4 83 aa3.11□□□□□ -1.91
ITGA4-209ENST00000478440 TSPAN13O95857 204 aa3.11□□□□□ -1.91
ITGA4-209ENST00000478440 IGLV7-43P04211 117 aa3.11□□□□□ -1.91
ITGA4-209ENST00000478440 IGLC6P0CF74 106 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 206 ms