RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 Q1RN00 199 aa4.3□□□□□ -1.72
TRA2B-211ENST00000477939 C9orf66Q5T8R8 295 aa4.3□□□□□ -1.72
TRA2B-211ENST00000477939 C20orf197Q8N268 126 aa4.3□□□□□ -1.72
TRA2B-211ENST00000477939 DIRC1Q969H9 104 aa4.3□□□□□ -1.72
TRA2B-211ENST00000477939 GPHA2Q96T91 129 aa4.3□□□□□ -1.72
TRA2B-211ENST00000477939 CYSTM1Q9H1C7 97 aa4.3□□□□□ -1.72
TRA2B-211ENST00000477939 KLK15Q9H2R5 256 aa4.3□□□□□ -1.72
TRA2B-211ENST00000477939 TIMM8BQ9Y5J9 83 aaPredicted RBP4.3□□□□□ -1.72
TRA2B-211ENST00000477939 IGHV7-81A0A0B4J1V7 117 aa4.29□□□□□ -1.72
TRA2B-211ENST00000477939 H7C423 109 aa4.29□□□□□ -1.72
TRA2B-211ENST00000477939 SH2D1AO60880 128 aa4.29□□□□□ -1.72
TRA2B-211ENST00000477939 ERC2-IT1O76042 136 aa4.29□□□□□ -1.72
TRA2B-211ENST00000477939 IGLV1-40P01703 118 aa4.29□□□□□ -1.72
TRA2B-211ENST00000477939 ZNF22P17026 224 aaPredicted RBP4.29□□□□□ -1.72
TRA2B-211ENST00000477939 ZNF80P51504 273 aaPredicted RBP4.29□□□□□ -1.72
TRA2B-211ENST00000477939 SUMO2P61956 95 aaKnown RBP4.29□□□□□ -1.72
TRA2B-211ENST00000477939 KIAA0087Q14695 138 aa4.29□□□□□ -1.72
TRA2B-211ENST00000477939 ZNF491Q8N8L2 437 aa4.29□□□□□ -1.72
TRA2B-211ENST00000477939 FXYD5Q96DB9 178 aa4.29□□□□□ -1.72
TRA2B-211ENST00000477939 Q96M66 194 aa4.29□□□□□ -1.72
TRA2B-211ENST00000477939 OVOL2Q9BRP0 275 aa4.29□□□□□ -1.72
TRA2B-211ENST00000477939 DKK2Q9UBU2 259 aa4.29□□□□□ -1.72
TRA2B-211ENST00000477939 EPPK1P58107 5090 aaKnown RBP4.29□□□□□ -1.72
TRA2B-211ENST00000477939 A0A087X002 238 aa4.28□□□□□ -1.72
TRA2B-211ENST00000477939 A0A096LNJ9 63 aa4.28□□□□□ -1.72
TRA2B-211ENST00000477939 LOC389332A0A1B0GUA5 103 aa4.28□□□□□ -1.72
TRA2B-211ENST00000477939 ZNF815PA8K554 130 aa4.28□□□□□ -1.72
TRA2B-211ENST00000477939 F8VRH5 84 aa4.28□□□□□ -1.72
TRA2B-211ENST00000477939 K7EMI3 77 aa4.28□□□□□ -1.72
TRA2B-211ENST00000477939 SAA2P0DJI9 122 aaPredicted RBP4.28□□□□□ -1.72
TRA2B-211ENST00000477939 IAPPP10997 89 aa4.28□□□□□ -1.72
TRA2B-211ENST00000477939 ASB16-AS1Q495Z4 193 aa4.28□□□□□ -1.72
TRA2B-211ENST00000477939 ZNF833PQ6ZTB9 187 aa4.28□□□□□ -1.72
TRA2B-211ENST00000477939 FAM223AQ8IWN6 122 aa4.28□□□□□ -1.72
TRA2B-211ENST00000477939 Q9HAA7 133 aa4.28□□□□□ -1.72
TRA2B-211ENST00000477939 FAM30AQ9NZY2 134 aa4.28□□□□□ -1.72
TRA2B-211ENST00000477939 UBE2D4Q9Y2X8 147 aa4.28□□□□□ -1.72
TRA2B-211ENST00000477939 DNAH1Q9P2D7 4330 aa4.27□□□□□ -1.73
TRA2B-211ENST00000477939 TMEM223A0PJW6 202 aa4.27□□□□□ -1.73
TRA2B-211ENST00000477939 C3orf84H3BNL1 204 aa4.27□□□□□ -1.73
TRA2B-211ENST00000477939 NDUFA3O95167 84 aa4.27□□□□□ -1.73
TRA2B-211ENST00000477939 DNAL4O96015 105 aa4.27□□□□□ -1.73
TRA2B-211ENST00000477939 CRIP2P52943 208 aaPredicted RBP4.27□□□□□ -1.73
TRA2B-211ENST00000477939 SLURP1P55000 103 aa4.27□□□□□ -1.73
TRA2B-211ENST00000477939 LYPD5Q6UWN5 251 aa4.27□□□□□ -1.73
TRA2B-211ENST00000477939 NOTCH2NLQ7Z3S9 236 aa4.27□□□□□ -1.73
TRA2B-211ENST00000477939 MAPKAPK5-AS1Q8N8E1 139 aa4.27□□□□□ -1.73
TRA2B-211ENST00000477939 NPBQ8NG41 125 aa4.27□□□□□ -1.73
TRA2B-211ENST00000477939 MUC7Q8TAX7 377 aa4.27□□□□□ -1.73
TRA2B-211ENST00000477939 SMAD5-AS1Q9Y6J3 95 aa4.27□□□□□ -1.73
TRA2B-211ENST00000477939 TNCP24821 2201 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 IGHV4OR15-8A0A075B7B6 117 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 A0A087WW49 117 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 TRBV6-1A0A0K0K1D8 114 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 FAM223BA6NKX1 122 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 PMS2P5A8MQ11 134 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 PSPHP1O15172 72 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 COX7A2P2O60397 106 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 PPP1R17O96001 155 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 IGHV3-30P01768 117 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 SAA1P0DJI8 122 aaPredicted RBP4.26□□□□□ -1.73
TRA2B-211ENST00000477939 IGHV3-30-5P0DP03 117 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 EGR2P11161 476 aaPredicted RBP4.26□□□□□ -1.73
TRA2B-211ENST00000477939 RPL39P5Q59GN2 51 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 CASC10Q5T4H9 136 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 SPANXN1Q5VSR9 72 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 FAM19A3Q7Z5A8 133 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 TMEM263Q8WUH6 116 aaKnown RBP4.26□□□□□ -1.73
TRA2B-211ENST00000477939 CYP4F30PQ9H0H9 118 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 LINC00474Q9P2X8 69 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 PHLDA3Q9Y5J5 127 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 BIRC6Q9NR09 4857 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 HYDINQ4G0P3 5121 aa4.26□□□□□ -1.73
TRA2B-211ENST00000477939 IGKV1-5P01602 117 aa4.25□□□□□ -1.73
TRA2B-211ENST00000477939 IGHV3-11P01762 117 aa4.25□□□□□ -1.73
TRA2B-211ENST00000477939 IGKV1-16P04430 117 aa4.25□□□□□ -1.73
TRA2B-211ENST00000477939 MPLKIPQ8TAP9 179 aa4.25□□□□□ -1.73
TRA2B-211ENST00000477939 SMCR5Q8TEV8 140 aa4.25□□□□□ -1.73
TRA2B-211ENST00000477939 A0A0J9YY99 117 aa4.24□□□□□ -1.73
TRA2B-211ENST00000477939 A0A1B0GW54 56 aa4.24□□□□□ -1.73
TRA2B-211ENST00000477939 KLLNB2CW77 178 aa4.24□□□□□ -1.73
TRA2B-211ENST00000477939 F5H697 171 aa4.24□□□□□ -1.73
TRA2B-211ENST00000477939 F8WEM9 126 aa4.24□□□□□ -1.73
TRA2B-211ENST00000477939 PRYO14603 147 aa4.24□□□□□ -1.73
TRA2B-211ENST00000477939 TRIAP1O43715 76 aa4.24□□□□□ -1.73
TRA2B-211ENST00000477939 PROP1O75360 226 aa4.24□□□□□ -1.73
TRA2B-211ENST00000477939 IGHV4-30-4P0DP06 118 aa4.24□□□□□ -1.73
TRA2B-211ENST00000477939 MIFP14174 115 aa4.24□□□□□ -1.73
TRA2B-211ENST00000477939 ZNF138P52744 262 aa4.24□□□□□ -1.73
TRA2B-211ENST00000477939 LINC00205P59089 165 aa4.24□□□□□ -1.73
TRA2B-211ENST00000477939 LINC01554Q52M75 96 aa4.24□□□□□ -1.73
TRA2B-211ENST00000477939 ICOSQ9Y6W8 199 aa4.24□□□□□ -1.73
TRA2B-211ENST00000477939 IGKV1D-8A0A087WSZ0 117 aa4.23□□□□□ -1.73
TRA2B-211ENST00000477939 TRBV6-6A0A0A6YYG2 114 aa4.23□□□□□ -1.73
TRA2B-211ENST00000477939 IGKV1-6A0A0C4DH72 117 aa4.23□□□□□ -1.73
TRA2B-211ENST00000477939 LCE6AA0A183 80 aa4.23□□□□□ -1.73
TRA2B-211ENST00000477939 IGLV1-51P01701 117 aa4.23□□□□□ -1.73
TRA2B-211ENST00000477939 PRM2P04554 102 aa4.23□□□□□ -1.73
TRA2B-211ENST00000477939 SFTA2Q6UW10 78 aa4.23□□□□□ -1.73
TRA2B-211ENST00000477939 A0A0J9YX75 114 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms