RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 MRPL23Q16540 153 aaKnown RBP7.07□□□□□ -1.28
CMC1-209ENST00000477739 VSIG2Q96IQ7 327 aa7.07□□□□□ -1.28
CMC1-209ENST00000477739 FAM236AA0A1B0GUQ0 79 aa7.07□□□□□ -1.28
CMC1-209ENST00000477739 FAM236BA0A1B0GV22 79 aa7.07□□□□□ -1.28
CMC1-209ENST00000477739 CITED2Q99967 270 aaPredicted RBP7.07□□□□□ -1.28
CMC1-209ENST00000477739 H7C423 109 aa7.06□□□□□ -1.28
CMC1-209ENST00000477739 MIR7-3HGQ8N6C7 128 aa7.06□□□□□ -1.28
CMC1-209ENST00000477739 HIST1H4AP62805 103 aaKnown RBP7.06□□□□□ -1.28
CMC1-209ENST00000477739 PRR3P79522 188 aaKnown RBP7.06□□□□□ -1.28
CMC1-209ENST00000477739 C6orf226Q5I0X4 101 aa7.06□□□□□ -1.28
CMC1-209ENST00000477739 ODF3Q96PU9 254 aa7.06□□□□□ -1.28
CMC1-209ENST00000477739 BAALC-AS2P0C853 105 aa7.05□□□□□ -1.28
CMC1-209ENST00000477739 UBE2D4Q9Y2X8 147 aa7.05□□□□□ -1.28
CMC1-209ENST00000477739 BAHCC1Q9P281 2608 aa7.05□□□□□ -1.28
CMC1-209ENST00000477739 CRPP02741 224 aa7.05□□□□□ -1.28
CMC1-209ENST00000477739 AMELXQ99217 191 aa7.05□□□□□ -1.28
CMC1-209ENST00000477739 TRBV10-2A0A0K0K1G8 114 aa7.05□□□□□ -1.28
CMC1-209ENST00000477739 MIAQ16674 131 aa7.05□□□□□ -1.28
CMC1-209ENST00000477739 NDUFV3P56181 108 aaKnown RBP7.04□□□□□ -1.28
CMC1-209ENST00000477739 EDA2RQ9HAV5 297 aa7.04□□□□□ -1.28
CMC1-209ENST00000477739 C14orf132Q9NPU4 83 aa7.04□□□□□ -1.28
CMC1-209ENST00000477739 A0A096LNT2 108 aa7.04□□□□□ -1.28
CMC1-209ENST00000477739 CHCHD7Q9BUK0 85 aa7.04□□□□□ -1.28
CMC1-209ENST00000477739 CCL24O00175 119 aa7.03□□□□□ -1.28
CMC1-209ENST00000477739 DAZ2Q13117 558 aaKnown RBP7.03□□□□□ -1.28
CMC1-209ENST00000477739 DAZ4Q86SG3 579 aaKnown RBP7.03□□□□□ -1.28
CMC1-209ENST00000477739 SMR3AQ99954 134 aa7.03□□□□□ -1.28
CMC1-209ENST00000477739 DAZ3Q9NR90 486 aaKnown RBP7.03□□□□□ -1.28
CMC1-209ENST00000477739 LINC00308Q8TCZ7 52 aa7.03□□□□□ -1.28
CMC1-209ENST00000477739 VWFP04275 2813 aa7.03□□□□□ -1.28
CMC1-209ENST00000477739 COL6A5A8TX70 2615 aa7.03□□□□□ -1.28
CMC1-209ENST00000477739 TRBV6-5A0A0K0K1A5 114 aa7.02□□□□□ -1.29
CMC1-209ENST00000477739 PF4P02776 101 aa7.02□□□□□ -1.29
CMC1-209ENST00000477739 C4orf3Q8WVX3 66 aa7.02□□□□□ -1.29
CMC1-209ENST00000477739 SCGB1A1P11684 91 aa7.02□□□□□ -1.29
CMC1-209ENST00000477739 ODF3L2Q3SX64 289 aa7.02□□□□□ -1.29
CMC1-209ENST00000477739 SDIM1Q6ZPB5 146 aa7.02□□□□□ -1.29
CMC1-209ENST00000477739 TMEM243Q9BU79 118 aa7.02□□□□□ -1.29
CMC1-209ENST00000477739 SND1-IT1Q9HBX3 110 aa7.02□□□□□ -1.29
CMC1-209ENST00000477739 LECT2O14960 151 aa7.02□□□□□ -1.29
CMC1-209ENST00000477739 DEFB114Q30KQ6 69 aa7.02□□□□□ -1.29
CMC1-209ENST00000477739 LINC00242Q5T6M2 205 aa7.02□□□□□ -1.29
CMC1-209ENST00000477739 LINC00482Q8N8I6 264 aa7.02□□□□□ -1.29
CMC1-209ENST00000477739 RPL32P62910 135 aaKnown RBP7.01□□□□□ -1.29
CMC1-209ENST00000477739 WFDC9Q8NEX5 89 aa7.01□□□□□ -1.29
CMC1-209ENST00000477739 KLK5Q9Y337 293 aaPredicted RBP7.01□□□□□ -1.29
CMC1-209ENST00000477739 A0A0B4J2C4 111 aa7.01□□□□□ -1.29
CMC1-209ENST00000477739 DNAJC9-AS1A6NH13 148 aa7.01□□□□□ -1.29
CMC1-209ENST00000477739 STAB1Q9NY15 2570 aa7.01□□□□□ -1.29
CMC1-209ENST00000477739 CFAP161Q6P656 301 aa7.01□□□□□ -1.29
CMC1-209ENST00000477739 SOSTDC1Q6X4U4 206 aa7.01□□□□□ -1.29
CMC1-209ENST00000477739 NCR3O14931 201 aa7□□□□□ -1.29
CMC1-209ENST00000477739 IGLV4-60A0A075B6I1 120 aa7□□□□□ -1.29
CMC1-209ENST00000477739 MRPS36P82909 103 aaKnown RBP7□□□□□ -1.29
CMC1-209ENST00000477739 SPANXA1Q9NS26 97 aa7□□□□□ -1.29
CMC1-209ENST00000477739 K7EQD1 137 aa7□□□□□ -1.29
CMC1-209ENST00000477739 Q8N3U1 123 aa7□□□□□ -1.29
CMC1-209ENST00000477739 ATP6V0E2Q8NHE4 81 aa7□□□□□ -1.29
CMC1-209ENST00000477739 A0A087WVE0 104 aa6.99□□□□□ -1.29
CMC1-209ENST00000477739 A8MTW9 85 aa6.99□□□□□ -1.29
CMC1-209ENST00000477739 HERVK_113P63121 156 aa6.99□□□□□ -1.29
CMC1-209ENST00000477739 C9orf116Q5BN46 136 aaPredicted RBP6.99□□□□□ -1.29
CMC1-209ENST00000477739 C9orf153Q5TBE3 101 aa6.99□□□□□ -1.29
CMC1-209ENST00000477739 C1orf158Q8N1D5 194 aa6.99□□□□□ -1.29
CMC1-209ENST00000477739 FSHBP01225 129 aa6.99□□□□□ -1.29
CMC1-209ENST00000477739 NTM-AS1Q6ZSK4 140 aa6.99□□□□□ -1.29
CMC1-209ENST00000477739 LRRC75A-AS1Q8N1F1 130 aa6.99□□□□□ -1.29
CMC1-209ENST00000477739 FAM218AQ96MZ4 157 aa6.98□□□□□ -1.29
CMC1-209ENST00000477739 GYPEP15421 78 aa6.98□□□□□ -1.29
CMC1-209ENST00000477739 MALP21145 153 aa6.98□□□□□ -1.29
CMC1-209ENST00000477739 HERV-K104P63124 156 aa6.98□□□□□ -1.29
CMC1-209ENST00000477739 ANGP03950 147 aaKnown RBP6.97□□□□□ -1.29
CMC1-209ENST00000477739 SMIM1B2RUZ4 78 aa6.97□□□□□ -1.29
CMC1-209ENST00000477739 TRBV30A0A0K0K1B3 111 aa6.97□□□□□ -1.29
CMC1-209ENST00000477739 LST1O00453 97 aa6.97□□□□□ -1.29
CMC1-209ENST00000477739 DEFB135Q30KP9 77 aa6.97□□□□□ -1.29
CMC1-209ENST00000477739 RNF152Q8N8N0 203 aa6.97□□□□□ -1.29
CMC1-209ENST00000477739 LITAFQ99732 161 aa6.97□□□□□ -1.29
CMC1-209ENST00000477739 A0A087WYN8 130 aa6.96□□□□□ -1.3
CMC1-209ENST00000477739 ZNF469Q96JG9 3925 aaPredicted RBP6.96□□□□□ -1.3
CMC1-209ENST00000477739 COX7B2Q8TF08 81 aa6.96□□□□□ -1.3
CMC1-209ENST00000477739 DNAJC30Q96LL9 226 aa6.94□□□□□ -1.3
CMC1-209ENST00000477739 F5H768 121 aa6.94□□□□□ -1.3
CMC1-209ENST00000477739 TIRAPP58753 221 aa6.94□□□□□ -1.3
CMC1-209ENST00000477739 LINC00269Q8N2A0 174 aa6.94□□□□□ -1.3
CMC1-209ENST00000477739 C11orf72Q8NBR9 251 aa6.94□□□□□ -1.3
CMC1-209ENST00000477739 S100A7L2Q5SY68 101 aa6.94□□□□□ -1.3
CMC1-209ENST00000477739 FAM104AQ969W3 186 aa6.94□□□□□ -1.3
CMC1-209ENST00000477739 NHLRC4P0CG21 123 aaPredicted RBP6.93□□□□□ -1.3
CMC1-209ENST00000477739 C9orf129Q5T035 196 aaKnown RBP6.93□□□□□ -1.3
CMC1-209ENST00000477739 LINC00337Q8N6G1 96 aa6.93□□□□□ -1.3
CMC1-209ENST00000477739 COX7A2LO14548 114 aa6.93□□□□□ -1.3
CMC1-209ENST00000477739 NDUFA1O15239 70 aa6.93□□□□□ -1.3
CMC1-209ENST00000477739 TMEM86BQ8N661 226 aa6.93□□□□□ -1.3
CMC1-209ENST00000477739 SMIM11BQ8TCY0 68 aa6.93□□□□□ -1.3
CMC1-209ENST00000477739 LAMTOR3Q9UHA4 124 aa6.93□□□□□ -1.3
CMC1-209ENST00000477739 TENM1Q9UKZ4 2725 aa6.93□□□□□ -1.3
CMC1-209ENST00000477739 FBN1P35555 2871 aaKnown RBP6.93□□□□□ -1.3
CMC1-209ENST00000477739 LINC01006Q8NI28 216 aa6.93□□□□□ -1.3
CMC1-209ENST00000477739 CR1P17927 2039 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms