RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 TMEM141Q96I45 108 aa8.05□□□□□ -1.12
CLCNKA-205ENST00000477360 IGLV4-3A0A075B6K6 122 aa8.04□□□□□ -1.12
CLCNKA-205ENST00000477360 GVQW2A0A096LPI5 108 aaPredicted RBP8.04□□□□□ -1.12
CLCNKA-205ENST00000477360 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.04□□□□□ -1.12
CLCNKA-205ENST00000477360 GAGE12HA6NDE8 117 aa8.04□□□□□ -1.12
CLCNKA-205ENST00000477360 Q6ZUT4 128 aa8.04□□□□□ -1.12
CLCNKA-205ENST00000477360 FUSP35637 526 aaKnown RBP eCLIP8.03□□□□□ -1.12
CLCNKA-205ENST00000477360 FOXI1Q12951 378 aa8.03□□□□□ -1.12
CLCNKA-205ENST00000477360 SCGB3A1Q96QR1 104 aa8.03□□□□□ -1.12
CLCNKA-205ENST00000477360 AMELXQ99217 191 aa8.03□□□□□ -1.12
CLCNKA-205ENST00000477360 IGHV1-58A0A0C4DH39 117 aa8.02□□□□□ -1.13
CLCNKA-205ENST00000477360 hDV102S1A0JD36 115 aa8.02□□□□□ -1.13
CLCNKA-205ENST00000477360 NUPR1O60356 82 aa8.02□□□□□ -1.13
CLCNKA-205ENST00000477360 ATP5LO75964 103 aa8.02□□□□□ -1.13
CLCNKA-205ENST00000477360 C15orf56Q8N910 161 aa8.02□□□□□ -1.13
CLCNKA-205ENST00000477360 PACRGQ96M98 296 aaPredicted RBP8.02□□□□□ -1.13
CLCNKA-205ENST00000477360 PKIGQ9Y2B9 76 aa8.02□□□□□ -1.13
CLCNKA-205ENST00000477360 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.01□□□□□ -1.13
CLCNKA-205ENST00000477360 PMCHL1Q16048 86 aa8.01□□□□□ -1.13
CLCNKA-205ENST00000477360 Q6ZN92 141 aa8.01□□□□□ -1.13
CLCNKA-205ENST00000477360 TEX43Q6ZNM6 134 aa8.01□□□□□ -1.13
CLCNKA-205ENST00000477360 LINC00173Q6ZV60 143 aa8.01□□□□□ -1.13
CLCNKA-205ENST00000477360 FAM19A3Q7Z5A8 133 aa8.01□□□□□ -1.13
CLCNKA-205ENST00000477360 OPRPNQ99935 248 aaPredicted RBP8.01□□□□□ -1.13
CLCNKA-205ENST00000477360 DNAH8Q96JB1 4490 aa8.01□□□□□ -1.13
CLCNKA-205ENST00000477360 IGKV3OR2-268A0A0C4DH90 116 aa8□□□□□ -1.13
CLCNKA-205ENST00000477360 XCL1P47992 114 aa8□□□□□ -1.13
CLCNKA-205ENST00000477360 FAM19A2Q8N3H0 131 aa8□□□□□ -1.13
CLCNKA-205ENST00000477360 CHAC1Q9BUX1 264 aa8□□□□□ -1.13
CLCNKA-205ENST00000477360 VCX2Q9H322 139 aa8□□□□□ -1.13
CLCNKA-205ENST00000477360 IGHV3-64A0A075B6Q5 118 aa7.99□□□□□ -1.13
CLCNKA-205ENST00000477360 F8WDY8 70 aa7.99□□□□□ -1.13
CLCNKA-205ENST00000477360 NDUFA6P56556 154 aa7.99□□□□□ -1.13
CLCNKA-205ENST00000477360 C2orf88Q9BSF0 95 aa7.99□□□□□ -1.13
CLCNKA-205ENST00000477360 FAM30AQ9NZY2 134 aa7.99□□□□□ -1.13
CLCNKA-205ENST00000477360 IFITM10A6NMD0 228 aa7.98□□□□□ -1.13
CLCNKA-205ENST00000477360 EPM2AB3EWF7 344 aa7.98□□□□□ -1.13
CLCNKA-205ENST00000477360 FAM229AH3BQW9 127 aa7.98□□□□□ -1.13
CLCNKA-205ENST00000477360 COX7A2LO14548 114 aa7.98□□□□□ -1.13
CLCNKA-205ENST00000477360 LEPROTL1O95214 131 aa7.98□□□□□ -1.13
CLCNKA-205ENST00000477360 UBE2D1P51668 147 aa7.98□□□□□ -1.13
CLCNKA-205ENST00000477360 RNASE13Q5GAN3 156 aaKnown RBP7.98□□□□□ -1.13
CLCNKA-205ENST00000477360 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
CLCNKA-205ENST00000477360 APOMO95445 188 aa7.97□□□□□ -1.13
CLCNKA-205ENST00000477360 SEC11AP67812 179 aa7.97□□□□□ -1.13
CLCNKA-205ENST00000477360 CIRBPQ14011 172 aaKnown RBP7.97□□□□□ -1.13
CLCNKA-205ENST00000477360 PMVKQ15126 192 aa7.97□□□□□ -1.13
CLCNKA-205ENST00000477360 IFI27L1Q96BM0 104 aa7.97□□□□□ -1.13
CLCNKA-205ENST00000477360 HSPB8Q9UJY1 196 aa7.97□□□□□ -1.13
CLCNKA-205ENST00000477360 TRAV13-1A0A0B4J241 112 aa7.96□□□□□ -1.14
CLCNKA-205ENST00000477360 TRAV12-1A0A0B4J245 112 aa7.96□□□□□ -1.14
CLCNKA-205ENST00000477360 IGHV3OR16-9A0A0B4J2B5 98 aa7.96□□□□□ -1.14
CLCNKA-205ENST00000477360 SLPIP03973 132 aa7.96□□□□□ -1.14
CLCNKA-205ENST00000477360 LINC01561Q8N1V8 128 aa7.96□□□□□ -1.14
CLCNKA-205ENST00000477360 CST9LQ9H4G1 147 aa7.96□□□□□ -1.14
CLCNKA-205ENST00000477360 ZNF561-AS1K7EIQ3 104 aa7.95□□□□□ -1.14
CLCNKA-205ENST00000477360 S100A6P06703 90 aa7.95□□□□□ -1.14
CLCNKA-205ENST00000477360 MALP21145 153 aa7.95□□□□□ -1.14
CLCNKA-205ENST00000477360 LINC00242Q5T6M2 205 aa7.95□□□□□ -1.14
CLCNKA-205ENST00000477360 SCXQ7RTU7 201 aa7.95□□□□□ -1.14
CLCNKA-205ENST00000477360 OR10D4PQ8NGN7 298 aa7.95□□□□□ -1.14
CLCNKA-205ENST00000477360 C2orf48Q96LS8 159 aa7.95□□□□□ -1.14
CLCNKA-205ENST00000477360 LINC01620Q4KN68 170 aa7.94□□□□□ -1.14
CLCNKA-205ENST00000477360 ZC2HC1BQ5TFG8 222 aa7.94□□□□□ -1.14
CLCNKA-205ENST00000477360 KRTAP17-1Q9BYP8 105 aa7.94□□□□□ -1.14
CLCNKA-205ENST00000477360 LINC00474Q9P2X8 69 aa7.94□□□□□ -1.14
CLCNKA-205ENST00000477360 IGLV5-45A0A087WSX0 123 aa7.93□□□□□ -1.14
CLCNKA-205ENST00000477360 A0A087WZ39 114 aa7.93□□□□□ -1.14
CLCNKA-205ENST00000477360 TINCRA0A1B0GVN0 87 aa7.93□□□□□ -1.14
CLCNKA-205ENST00000477360 C5orf52A6NGY3 159 aa7.93□□□□□ -1.14
CLCNKA-205ENST00000477360 HERVK_113P63121 156 aa7.93□□□□□ -1.14
CLCNKA-205ENST00000477360 Q5VSD8 79 aa7.93□□□□□ -1.14
CLCNKA-205ENST00000477360 HIST3H2BBQ8N257 126 aa7.93□□□□□ -1.14
CLCNKA-205ENST00000477360 CIRBP-AS1Q8TBR5 109 aa7.93□□□□□ -1.14
CLCNKA-205ENST00000477360 PCLOQ9Y6V0 5065 aa7.92□□□□□ -1.14
CLCNKA-205ENST00000477360 PLA2G1BP04054 148 aaKnown RBP7.92□□□□□ -1.14
CLCNKA-205ENST00000477360 IGLC3P0DOY3 106 aa7.92□□□□□ -1.14
CLCNKA-205ENST00000477360 FABP4P15090 132 aa7.92□□□□□ -1.14
CLCNKA-205ENST00000477360 SYCNQ0VAF6 134 aa7.92□□□□□ -1.14
CLCNKA-205ENST00000477360 RNF151Q2KHN1 245 aa7.92□□□□□ -1.14
CLCNKA-205ENST00000477360 HIGD2BQ4VC39 106 aa7.92□□□□□ -1.14
CLCNKA-205ENST00000477360 KRTAP4-5Q9BYR2 181 aa7.92□□□□□ -1.14
CLCNKA-205ENST00000477360 IGLV4-69A0A075B6H9 119 aa7.91□□□□□ -1.14
CLCNKA-205ENST00000477360 A0A0J9YXV3 536 aa7.91□□□□□ -1.14
CLCNKA-205ENST00000477360 F8VRH5 84 aa7.91□□□□□ -1.14
CLCNKA-205ENST00000477360 ODF1Q14990 250 aa7.91□□□□□ -1.14
CLCNKA-205ENST00000477360 SPACA4Q8TDM5 124 aa7.91□□□□□ -1.14
CLCNKA-205ENST00000477360 CARD19Q96LW7 228 aa7.91□□□□□ -1.14
CLCNKA-205ENST00000477360 MAP1LC3CQ9BXW4 147 aa7.91□□□□□ -1.14
CLCNKA-205ENST00000477360 FAT1Q14517 4588 aa7.91□□□□□ -1.14
CLCNKA-205ENST00000477360 SNRPEP62304 92 aaKnown RBP7.9□□□□□ -1.14
CLCNKA-205ENST00000477360 COX6A2Q02221 97 aa7.9□□□□□ -1.14
CLCNKA-205ENST00000477360 C5orf38Q86SI9 138 aa7.9□□□□□ -1.14
CLCNKA-205ENST00000477360 CHTOPQ9Y3Y2 248 aaKnown RBP7.9□□□□□ -1.14
CLCNKA-205ENST00000477360 VPS13BQ7Z7G8 4022 aa7.9□□□□□ -1.15
CLCNKA-205ENST00000477360 ABCA13Q86UQ4 5058 aa7.89□□□□□ -1.15
CLCNKA-205ENST00000477360 SMR3BP02814 79 aaPredicted RBP7.89□□□□□ -1.15
CLCNKA-205ENST00000477360 LINC00528Q8N1L1 170 aa7.89□□□□□ -1.15
CLCNKA-205ENST00000477360 HIST1H2BLQ99880 126 aa7.89□□□□□ -1.15
CLCNKA-205ENST00000477360 GEMIN7Q9H840 131 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms