RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 MPV17L2Q567V2 206 aa3.03□□□□□ -1.92
NSMCE4A-208ENST00000477289 TEX43Q6ZNM6 134 aa3.03□□□□□ -1.92
NSMCE4A-208ENST00000477289 NTM-AS1Q6ZSK4 140 aa3.03□□□□□ -1.92
NSMCE4A-208ENST00000477289 LINC00269Q8N2A0 174 aa3.03□□□□□ -1.92
NSMCE4A-208ENST00000477289 Q8N976 141 aa3.03□□□□□ -1.92
NSMCE4A-208ENST00000477289 C20orf203Q8NBC4 194 aa3.03□□□□□ -1.92
NSMCE4A-208ENST00000477289 DEFB104AQ8WTQ1 72 aa3.03□□□□□ -1.92
NSMCE4A-208ENST00000477289 ALKBH7Q9BT30 221 aaPredicted RBP3.03□□□□□ -1.92
NSMCE4A-208ENST00000477289 VCX2Q9H322 139 aa3.03□□□□□ -1.92
NSMCE4A-208ENST00000477289 SPANXA1Q9NS26 97 aa3.03□□□□□ -1.92
NSMCE4A-208ENST00000477289 Q9UF83 564 aa3.03□□□□□ -1.92
NSMCE4A-208ENST00000477289 APOMO95445 188 aa3.02□□□□□ -1.93
NSMCE4A-208ENST00000477289 TRGC2P03986 189 aa3.02□□□□□ -1.93
NSMCE4A-208ENST00000477289 ESDP10768 282 aa3.02□□□□□ -1.93
NSMCE4A-208ENST00000477289 SEC61BP60468 96 aaKnown RBP3.02□□□□□ -1.93
NSMCE4A-208ENST00000477289 C2orf66Q6UXQ4 117 aa3.02□□□□□ -1.93
NSMCE4A-208ENST00000477289 Q6ZR54 194 aa3.02□□□□□ -1.93
NSMCE4A-208ENST00000477289 MRPL52Q86TS9 123 aaKnown RBP3.02□□□□□ -1.93
NSMCE4A-208ENST00000477289 ZNF664Q8N3J9 261 aa3.02□□□□□ -1.93
NSMCE4A-208ENST00000477289 CHCHD1Q96BP2 118 aaKnown RBP3.02□□□□□ -1.93
NSMCE4A-208ENST00000477289 TMEM141Q96I45 108 aa3.02□□□□□ -1.93
NSMCE4A-208ENST00000477289 SCGB3A1Q96QR1 104 aa3.02□□□□□ -1.93
NSMCE4A-208ENST00000477289 TIMM21Q9BVV7 248 aa3.02□□□□□ -1.93
NSMCE4A-208ENST00000477289 CSDC2Q9Y534 153 aaKnown RBP3.02□□□□□ -1.93
NSMCE4A-208ENST00000477289 TRAV13-1A0A0B4J241 112 aa3.01□□□□□ -1.93
NSMCE4A-208ENST00000477289 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.01□□□□□ -1.93
NSMCE4A-208ENST00000477289 ATP5LO75964 103 aa3.01□□□□□ -1.93
NSMCE4A-208ENST00000477289 HBDP02042 147 aa3.01□□□□□ -1.93
NSMCE4A-208ENST00000477289 NDUFA6P56556 154 aa3.01□□□□□ -1.93
NSMCE4A-208ENST00000477289 MRPS36P82909 103 aaKnown RBP3.01□□□□□ -1.93
NSMCE4A-208ENST00000477289 CLPSL2Q6UWE3 100 aa3.01□□□□□ -1.93
NSMCE4A-208ENST00000477289 C18orf32Q8TCD1 76 aa3.01□□□□□ -1.93
NSMCE4A-208ENST00000477289 PKIGQ9Y2B9 76 aa3.01□□□□□ -1.93
NSMCE4A-208ENST00000477289 UBE2D4Q9Y2X8 147 aa3.01□□□□□ -1.93
NSMCE4A-208ENST00000477289 PYGO1Q9Y3Y4 419 aa3.01□□□□□ -1.93
NSMCE4A-208ENST00000477289 DNAH9Q9NYC9 4486 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 IGLV4-60A0A075B6I1 120 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 IGLV10-54A0A075B6I4 117 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 TRAV16A0A0A6YYK6 109 aaPredicted RBP3□□□□□ -1.93
NSMCE4A-208ENST00000477289 COLCA2A8K830 154 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 USP17L23D6RBM5 183 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 SCO1O75880 301 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 S100A6P06703 90 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 PRSS1P07477 247 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 ENHOQ6UWT2 76 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 ERASQ7Z444 233 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 CHCHD10Q8WYQ3 142 aaPredicted RBP3□□□□□ -1.93
NSMCE4A-208ENST00000477289 TOMM6Q96B49 74 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 PACRGQ96M98 296 aaPredicted RBP3□□□□□ -1.93
NSMCE4A-208ENST00000477289 TIMM17AQ99595 171 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 GEMIN7Q9H840 131 aaKnown RBP3□□□□□ -1.93
NSMCE4A-208ENST00000477289 CDC42SE2Q9NRR3 84 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 PRR34Q9NV39 138 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 HSPB8Q9UJY1 196 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 TENM2Q9NT68 2774 aa3□□□□□ -1.93
NSMCE4A-208ENST00000477289 HUWE1Q7Z6Z7 4374 aaKnown RBP2.99□□□□□ -1.93
NSMCE4A-208ENST00000477289 LINC00959A0A1B0GUT2 108 aa2.99□□□□□ -1.93
NSMCE4A-208ENST00000477289 H3BRM9 83 aa2.99□□□□□ -1.93
NSMCE4A-208ENST00000477289 COX7A2LO14548 114 aa2.99□□□□□ -1.93
NSMCE4A-208ENST00000477289 LEPROTL1O95214 131 aa2.99□□□□□ -1.93
NSMCE4A-208ENST00000477289 XCL1P47992 114 aa2.99□□□□□ -1.93
NSMCE4A-208ENST00000477289 RPL39P62891 51 aaKnown RBP2.99□□□□□ -1.93
NSMCE4A-208ENST00000477289 HERVK_113P63121 156 aa2.99□□□□□ -1.93
NSMCE4A-208ENST00000477289 PMVKQ15126 192 aa2.99□□□□□ -1.93
NSMCE4A-208ENST00000477289 CD164L2Q6UWJ8 174 aa2.99□□□□□ -1.93
NSMCE4A-208ENST00000477289 BAALCQ8WXS3 180 aa2.99□□□□□ -1.93
NSMCE4A-208ENST00000477289 YPEL4Q96NS1 127 aa2.99□□□□□ -1.93
NSMCE4A-208ENST00000477289 IGLV4-3A0A075B6K6 122 aa2.98□□□□□ -1.93
NSMCE4A-208ENST00000477289 A0A087WTM6 91 aa2.98□□□□□ -1.93
NSMCE4A-208ENST00000477289 IGHV1-58A0A0C4DH39 117 aa2.98□□□□□ -1.93
NSMCE4A-208ENST00000477289 LINC01546A6NGU7 62 aa2.98□□□□□ -1.93
NSMCE4A-208ENST00000477289 S100A2P29034 98 aa2.98□□□□□ -1.93
NSMCE4A-208ENST00000477289 AKR1D1P51857 326 aa2.98□□□□□ -1.93
NSMCE4A-208ENST00000477289 RNASE13Q5GAN3 156 aaKnown RBP2.98□□□□□ -1.93
NSMCE4A-208ENST00000477289 Q6ZUT4 128 aa2.98□□□□□ -1.93
NSMCE4A-208ENST00000477289 LITAFQ99732 161 aa2.98□□□□□ -1.93
NSMCE4A-208ENST00000477289 MAP1LC3CQ9BXW4 147 aa2.98□□□□□ -1.93
NSMCE4A-208ENST00000477289 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 C20orf202A1L168 122 aa2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 IGIPA6NJ69 53 aa2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 C16orf90A8MZG2 172 aa2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 H0Y8G0 127 aa2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 LECT2O14960 151 aa2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 RTL8CO15255 209 aa2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 SERF1AO75920 110 aa2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 FABP4P15090 132 aa2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 PMCHL1Q16048 86 aa2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 SPATA12Q7Z6I5 190 aa2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 LINC00469Q8N7U9 141 aa2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 IFI27L1Q96BM0 104 aa2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 DPH3Q96FX2 82 aa2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 STARD9Q9P2P6 4700 aa2.97□□□□□ -1.93
NSMCE4A-208ENST00000477289 TINCRA0A1B0GVN0 87 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 F8WDY8 70 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 HIST1H2BKO60814 126 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 HIST1H2BJP06899 126 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 HIST1H2BOP23527 126 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 HIST1H2BBP33778 126 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 HIST1H2BDP58876 126 aa2.96□□□□□ -1.94
NSMCE4A-208ENST00000477289 CKS1BP61024 79 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms