RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 FOXI1Q12951 378 aa7.34□□□□□ -1.23
VARS2-208ENST00000477052 Q6ZRU5 148 aa7.34□□□□□ -1.23
VARS2-208ENST00000477052 TRAV9-1A0A075B6T8 112 aa7.33□□□□□ -1.24
VARS2-208ENST00000477052 A0A096LNI7 61 aa7.33□□□□□ -1.24
VARS2-208ENST00000477052 A0A1B0GXF2 115 aa7.33□□□□□ -1.24
VARS2-208ENST00000477052 APCSP02743 223 aa7.33□□□□□ -1.24
VARS2-208ENST00000477052 PMCHP20382 165 aa7.33□□□□□ -1.24
VARS2-208ENST00000477052 HBBP68871 147 aa7.33□□□□□ -1.24
VARS2-208ENST00000477052 CFAP161Q6P656 301 aa7.33□□□□□ -1.24
VARS2-208ENST00000477052 ATP5L2Q7Z4Y8 100 aa7.33□□□□□ -1.24
VARS2-208ENST00000477052 STPG4Q8N801 248 aa7.33□□□□□ -1.24
VARS2-208ENST00000477052 RNF185Q96GF1 192 aa7.33□□□□□ -1.24
VARS2-208ENST00000477052 SCGB1D1O95968 90 aa7.32□□□□□ -1.24
VARS2-208ENST00000477052 COX19Q49B96 90 aa7.32□□□□□ -1.24
VARS2-208ENST00000477052 MRPL54Q6P161 138 aaKnown RBP7.32□□□□□ -1.24
VARS2-208ENST00000477052 AMN1Q8IY45 258 aa7.32□□□□□ -1.24
VARS2-208ENST00000477052 ZNF664Q8N3J9 261 aa7.32□□□□□ -1.24
VARS2-208ENST00000477052 MRAP2Q96G30 205 aa7.32□□□□□ -1.24
VARS2-208ENST00000477052 GVQW2A0A096LPI5 108 aaPredicted RBP7.31□□□□□ -1.24
VARS2-208ENST00000477052 CCL25O15444 150 aa7.31□□□□□ -1.24
VARS2-208ENST00000477052 TSHBP01222 138 aa7.31□□□□□ -1.24
VARS2-208ENST00000477052 CAMPP49913 170 aa7.31□□□□□ -1.24
VARS2-208ENST00000477052 FAM104BQ5XKR9 115 aa7.31□□□□□ -1.24
VARS2-208ENST00000477052 C7orf33Q8WU49 177 aa7.31□□□□□ -1.24
VARS2-208ENST00000477052 TRBV6-5A0A0K0K1A5 114 aa7.3□□□□□ -1.24
VARS2-208ENST00000477052 LINC00959A0A1B0GUT2 108 aa7.3□□□□□ -1.24
VARS2-208ENST00000477052 SMKR1H3BMG3 65 aa7.3□□□□□ -1.24
VARS2-208ENST00000477052 I3L3M4 83 aa7.3□□□□□ -1.24
VARS2-208ENST00000477052 NCR2O95944 276 aa7.3□□□□□ -1.24
VARS2-208ENST00000477052 PRR3P79522 188 aaKnown RBP7.3□□□□□ -1.24
VARS2-208ENST00000477052 OR5A1Q8NGJ0 315 aa7.3□□□□□ -1.24
VARS2-208ENST00000477052 TNXBP22105 4242 aa7.3□□□□□ -1.24
VARS2-208ENST00000477052 ZNF25P17030 456 aaPredicted RBP7.29□□□□□ -1.24
VARS2-208ENST00000477052 TRAPPC1Q9Y5R8 145 aa7.29□□□□□ -1.24
VARS2-208ENST00000477052 H7C423 109 aa7.28□□□□□ -1.24
VARS2-208ENST00000477052 PPP1R17O96001 155 aa7.28□□□□□ -1.24
VARS2-208ENST00000477052 ESDP10768 282 aa7.28□□□□□ -1.24
VARS2-208ENST00000477052 MRPL51Q4U2R6 128 aaKnown RBP7.28□□□□□ -1.24
VARS2-208ENST00000477052 RNASE13Q5GAN3 156 aaKnown RBP7.28□□□□□ -1.24
VARS2-208ENST00000477052 TMEM101Q96IK0 257 aa7.28□□□□□ -1.24
VARS2-208ENST00000477052 MIEN1Q9BRT3 115 aa7.28□□□□□ -1.24
VARS2-208ENST00000477052 ST20Q9HBF5 79 aa7.28□□□□□ -1.24
VARS2-208ENST00000477052 DLEU1O43261 78 aa7.27□□□□□ -1.25
VARS2-208ENST00000477052 COL5A1-AS1Q5SY13 56 aa7.27□□□□□ -1.25
VARS2-208ENST00000477052 NRACQ8N912 160 aa7.27□□□□□ -1.25
VARS2-208ENST00000477052 CARD19Q96LW7 228 aa7.27□□□□□ -1.25
VARS2-208ENST00000477052 LRP2P98164 4655 aa7.27□□□□□ -1.25
VARS2-208ENST00000477052 IGHV1-58A0A0C4DH39 117 aa7.26□□□□□ -1.25
VARS2-208ENST00000477052 PPBPP02775 128 aa7.26□□□□□ -1.25
VARS2-208ENST00000477052 CKS2P33552 79 aa7.26□□□□□ -1.25
VARS2-208ENST00000477052 POLR2KP53803 58 aaKnown RBP7.26□□□□□ -1.25
VARS2-208ENST00000477052 VAMP8Q9BV40 100 aa7.26□□□□□ -1.25
VARS2-208ENST00000477052 CDC42SE2Q9NRR3 84 aa7.26□□□□□ -1.25
VARS2-208ENST00000477052 MT-ND6P03923 174 aa7.25□□□□□ -1.25
VARS2-208ENST00000477052 SYCNQ0VAF6 134 aa7.25□□□□□ -1.25
VARS2-208ENST00000477052 SS18Q15532 418 aa7.25□□□□□ -1.25
VARS2-208ENST00000477052 LINC01600Q96MT4 127 aa7.25□□□□□ -1.25
VARS2-208ENST00000477052 SNHG12Q9BXW3 62 aa7.25□□□□□ -1.25
VARS2-208ENST00000477052 RNF213Q63HN8 5207 aa7.25□□□□□ -1.25
VARS2-208ENST00000477052 IGLV4-69A0A075B6H9 119 aa7.24□□□□□ -1.25
VARS2-208ENST00000477052 TRBV27A0A0K0K1C4 114 aa7.24□□□□□ -1.25
VARS2-208ENST00000477052 D6R8Y8 96 aa7.24□□□□□ -1.25
VARS2-208ENST00000477052 ZNF561-AS1K7EIQ3 104 aa7.24□□□□□ -1.25
VARS2-208ENST00000477052 G0S2P27469 103 aa7.24□□□□□ -1.25
VARS2-208ENST00000477052 SUMO2P61956 95 aaKnown RBP7.24□□□□□ -1.25
VARS2-208ENST00000477052 RPL32P62910 135 aaKnown RBP7.24□□□□□ -1.25
VARS2-208ENST00000477052 GAGE2BQ13066 116 aa7.24□□□□□ -1.25
VARS2-208ENST00000477052 CD164L2Q6UWJ8 174 aa7.24□□□□□ -1.25
VARS2-208ENST00000477052 TMEM136Q6ZRR5 245 aa7.24□□□□□ -1.25
VARS2-208ENST00000477052 ORMDL3Q8N138 153 aa7.24□□□□□ -1.25
VARS2-208ENST00000477052 C20orf78Q9BR46 151 aa7.24□□□□□ -1.25
VARS2-208ENST00000477052 A0A1W2PNN7 141 aa7.23□□□□□ -1.25
VARS2-208ENST00000477052 C20orf202A1L168 122 aa7.23□□□□□ -1.25
VARS2-208ENST00000477052 TNFRSF6BO95407 300 aa7.23□□□□□ -1.25
VARS2-208ENST00000477052 TRAV13-1A0A0B4J241 112 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 A0A0J9YXV3 536 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 VCYO14598 125 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 NPYP01303 97 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 MALP21145 153 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 FCER1GP30273 86 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 PET117Q6UWS5 81 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 TEX43Q6ZNM6 134 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 Q6ZUT4 128 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 C5orf38Q86SI9 138 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 BAGE3Q86Y29 109 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 PRELID3AQ96N28 172 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 GNB1LQ9BYB4 327 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 UQCR10Q9UDW1 63 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 LAMTOR2Q9Y2Q5 125 aa7.22□□□□□ -1.25
VARS2-208ENST00000477052 PTTG1IPP53801 180 aa7.21□□□□□ -1.26
VARS2-208ENST00000477052 KRTAP10-8P60410 259 aa7.21□□□□□ -1.26
VARS2-208ENST00000477052 SRSF9Q13242 221 aaKnown RBP eCLIP7.21□□□□□ -1.26
VARS2-208ENST00000477052 KIR2DL4Q99706 377 aa7.21□□□□□ -1.26
VARS2-208ENST00000477052 OPRPNQ99935 248 aaPredicted RBP7.21□□□□□ -1.26
VARS2-208ENST00000477052 SMIM2Q9BVW6 85 aa7.21□□□□□ -1.26
VARS2-208ENST00000477052 LINC00474Q9P2X8 69 aa7.21□□□□□ -1.26
VARS2-208ENST00000477052 UBE2D4Q9Y2X8 147 aa7.21□□□□□ -1.26
VARS2-208ENST00000477052 PRSS47A8MTI9 375 aa7.2□□□□□ -1.26
VARS2-208ENST00000477052 COX7A2LO14548 114 aa7.2□□□□□ -1.26
VARS2-208ENST00000477052 PCP4P48539 62 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms