RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 SMDT1Q9H4I9 107 aa9.7□□□□□ -0.86
APOBEC3F-203ENST00000476513 C6orf48Q9UBA6 75 aa9.7□□□□□ -0.86
APOBEC3F-203ENST00000476513 FCER1GP30273 86 aa9.69□□□□□ -0.86
APOBEC3F-203ENST00000476513 TMEM241Q24JQ0 296 aa9.69□□□□□ -0.86
APOBEC3F-203ENST00000476513 MUC17Q685J3 4493 aa9.69□□□□□ -0.86
APOBEC3F-203ENST00000476513 SEC11CQ9BY50 192 aa9.69□□□□□ -0.86
APOBEC3F-203ENST00000476513 ZNF861PO60384 105 aa9.68□□□□□ -0.86
APOBEC3F-203ENST00000476513 APOC3P02656 99 aa9.68□□□□□ -0.86
APOBEC3F-203ENST00000476513 SMAGPQ0VAQ4 97 aa9.68□□□□□ -0.86
APOBEC3F-203ENST00000476513 VCYO14598 125 aa9.67□□□□□ -0.86
APOBEC3F-203ENST00000476513 SCO1O75880 301 aa9.67□□□□□ -0.86
APOBEC3F-203ENST00000476513 PEA15Q15121 130 aa9.67□□□□□ -0.86
APOBEC3F-203ENST00000476513 SVBPQ8N300 66 aa9.67□□□□□ -0.86
APOBEC3F-203ENST00000476513 IGHV3OR16-9A0A0B4J2B5 98 aa9.66□□□□□ -0.86
APOBEC3F-203ENST00000476513 GATCO43716 136 aaKnown RBP9.66□□□□□ -0.86
APOBEC3F-203ENST00000476513 ADCYAP1P18509 176 aa9.66□□□□□ -0.86
APOBEC3F-203ENST00000476513 RAB4AP20338 218 aa9.66□□□□□ -0.86
APOBEC3F-203ENST00000476513 SRSF3P84103 164 aaKnown RBP9.66□□□□□ -0.86
APOBEC3F-203ENST00000476513 TIMM21Q9BVV7 248 aa9.66□□□□□ -0.86
APOBEC3F-203ENST00000476513 TMEM191AQ9H0A3 160 aa9.66□□□□□ -0.86
APOBEC3F-203ENST00000476513 A0A087X002 238 aa9.65□□□□□ -0.86
APOBEC3F-203ENST00000476513 A8MWL6 223 aa9.65□□□□□ -0.86
APOBEC3F-203ENST00000476513 F8W036 122 aa9.65□□□□□ -0.86
APOBEC3F-203ENST00000476513 SMKR1H3BMG3 65 aa9.64□□□□□ -0.87
APOBEC3F-203ENST00000476513 SNAPINO95295 136 aa9.64□□□□□ -0.87
APOBEC3F-203ENST00000476513 AMN1Q8IY45 258 aa9.64□□□□□ -0.87
APOBEC3F-203ENST00000476513 C9orf129Q5T035 196 aaKnown RBP9.63□□□□□ -0.87
APOBEC3F-203ENST00000476513 TYMSOSQ8TAI1 123 aa9.63□□□□□ -0.87
APOBEC3F-203ENST00000476513 FAM104AQ969W3 186 aa9.63□□□□□ -0.87
APOBEC3F-203ENST00000476513 BORCS7Q96B45 105 aa9.63□□□□□ -0.87
APOBEC3F-203ENST00000476513 KIR2DL4Q99706 377 aa9.63□□□□□ -0.87
APOBEC3F-203ENST00000476513 RETNLBQ9BQ08 111 aa9.63□□□□□ -0.87
APOBEC3F-203ENST00000476513 SUMO2P61956 95 aaKnown RBP9.62□□□□□ -0.87
APOBEC3F-203ENST00000476513 NRACQ8N912 160 aa9.62□□□□□ -0.87
APOBEC3F-203ENST00000476513 A0A1B0GUT8 65 aa9.61□□□□□ -0.87
APOBEC3F-203ENST00000476513 CRYGAP11844 174 aa9.61□□□□□ -0.87
APOBEC3F-203ENST00000476513 KIAA0087Q14695 138 aa9.61□□□□□ -0.87
APOBEC3F-203ENST00000476513 CT83Q5H943 113 aa9.61□□□□□ -0.87
APOBEC3F-203ENST00000476513 FAM231DQ6ZW35 169 aa9.61□□□□□ -0.87
APOBEC3F-203ENST00000476513 TMEM18Q96B42 140 aa9.61□□□□□ -0.87
APOBEC3F-203ENST00000476513 CDIP1Q9H305 208 aa9.61□□□□□ -0.87
APOBEC3F-203ENST00000476513 C9JQL5 133 aa9.6□□□□□ -0.87
APOBEC3F-203ENST00000476513 NDUFC2-KCTD14E9PQ53 114 aa9.6□□□□□ -0.87
APOBEC3F-203ENST00000476513 LCE2DQ5TA82 110 aaPredicted RBP9.6□□□□□ -0.87
APOBEC3F-203ENST00000476513 EIF5A2Q9GZV4 153 aaKnown RBP9.6□□□□□ -0.87
APOBEC3F-203ENST00000476513 FSIP2Q5CZC0 6907 aa9.59□□□□□ -0.87
APOBEC3F-203ENST00000476513 TRBV30A0A0K0K1B3 111 aa9.59□□□□□ -0.87
APOBEC3F-203ENST00000476513 HIGD1CA8MV81 97 aa9.59□□□□□ -0.87
APOBEC3F-203ENST00000476513 NUPR1O60356 82 aa9.59□□□□□ -0.87
APOBEC3F-203ENST00000476513 PPP1R17O96001 155 aa9.59□□□□□ -0.87
APOBEC3F-203ENST00000476513 RPL39P62891 51 aaKnown RBP9.59□□□□□ -0.87
APOBEC3F-203ENST00000476513 TPRXLQ17RH7 258 aa9.59□□□□□ -0.87
APOBEC3F-203ENST00000476513 CTDSP1Q9GZU7 261 aa9.59□□□□□ -0.87
APOBEC3F-203ENST00000476513 TAGLN2P37802 199 aaKnown RBP9.58□□□□□ -0.88
APOBEC3F-203ENST00000476513 C2orf82Q6UX34 121 aa9.58□□□□□ -0.88
APOBEC3F-203ENST00000476513 CRCT1Q9UGL9 99 aa9.58□□□□□ -0.88
APOBEC3F-203ENST00000476513 TMA7Q9Y2S6 64 aaKnown RBP9.58□□□□□ -0.88
APOBEC3F-203ENST00000476513 IFITM10A6NMD0 228 aa9.56□□□□□ -0.88
APOBEC3F-203ENST00000476513 PPP1R2P9O14990 202 aa9.56□□□□□ -0.88
APOBEC3F-203ENST00000476513 SRP19P09132 144 aaKnown RBP9.56□□□□□ -0.88
APOBEC3F-203ENST00000476513 SPANXA1Q9NS26 97 aa9.56□□□□□ -0.88
APOBEC3F-203ENST00000476513 ANAPC11Q9NYG5 84 aa9.56□□□□□ -0.88
APOBEC3F-203ENST00000476513 C22orf24Q9Y442 160 aa9.56□□□□□ -0.88
APOBEC3F-203ENST00000476513 TGIF2-C20orf24A0A0A6YYL0 155 aa9.55□□□□□ -0.88
APOBEC3F-203ENST00000476513 RPL28P46779 137 aaKnown RBP9.55□□□□□ -0.88
APOBEC3F-203ENST00000476513 HBBP68871 147 aa9.55□□□□□ -0.88
APOBEC3F-203ENST00000476513 MRPS36P82909 103 aaKnown RBP9.55□□□□□ -0.88
APOBEC3F-203ENST00000476513 FAM74A3Q4VXF1 159 aa9.55□□□□□ -0.88
APOBEC3F-203ENST00000476513 KRTAP13-2Q52LG2 175 aa9.55□□□□□ -0.88
APOBEC3F-203ENST00000476513 PACRGQ96M98 296 aaPredicted RBP9.55□□□□□ -0.88
APOBEC3F-203ENST00000476513 IGLV7-46A0A075B6I9 117 aa9.54□□□□□ -0.88
APOBEC3F-203ENST00000476513 RHEBQ15382 184 aa9.53□□□□□ -0.88
APOBEC3F-203ENST00000476513 LBHQ53QV2 105 aaPredicted RBP9.53□□□□□ -0.88
APOBEC3F-203ENST00000476513 SMCO4Q9NRQ5 59 aa9.53□□□□□ -0.88
APOBEC3F-203ENST00000476513 TMEM250H0YL14 139 aa9.52□□□□□ -0.89
APOBEC3F-203ENST00000476513 BCE1O60756 84 aa9.52□□□□□ -0.89
APOBEC3F-203ENST00000476513 RIGQ13278 110 aa9.52□□□□□ -0.89
APOBEC3F-203ENST00000476513 MRPL51Q4U2R6 128 aaKnown RBP9.52□□□□□ -0.89
APOBEC3F-203ENST00000476513 LINC00469Q8N7U9 141 aa9.52□□□□□ -0.89
APOBEC3F-203ENST00000476513 C20orf78Q9BR46 151 aa9.52□□□□□ -0.89
APOBEC3F-203ENST00000476513 LOC105371267A0A1B0GV96 52 aa9.51□□□□□ -0.89
APOBEC3F-203ENST00000476513 TCAPO15273 167 aa9.51□□□□□ -0.89
APOBEC3F-203ENST00000476513 RPL32P62910 135 aaKnown RBP9.51□□□□□ -0.89
APOBEC3F-203ENST00000476513 LINC00242Q5T6M2 205 aa9.51□□□□□ -0.89
APOBEC3F-203ENST00000476513 LINC00173Q6ZV60 143 aa9.51□□□□□ -0.89
APOBEC3F-203ENST00000476513 LINC00304Q8N9R0 145 aa9.51□□□□□ -0.89
APOBEC3F-203ENST00000476513 TRBV24-1A0A075B6N3 115 aa9.5□□□□□ -0.89
APOBEC3F-203ENST00000476513 ZNF727A8MUV8 499 aa9.5□□□□□ -0.89
APOBEC3F-203ENST00000476513 FAM104BQ5XKR9 115 aa9.5□□□□□ -0.89
APOBEC3F-203ENST00000476513 CBLN2Q8IUK8 224 aa9.5□□□□□ -0.89
APOBEC3F-203ENST00000476513 XAGE1AQ9HD64 81 aa9.5□□□□□ -0.89
APOBEC3F-203ENST00000476513 CEBPGP53567 150 aa9.49□□□□□ -0.89
APOBEC3F-203ENST00000476513 PNRC1Q12796 327 aaPredicted RBP9.49□□□□□ -0.89
APOBEC3F-203ENST00000476513 RPS10P5Q9NQ39 176 aa9.49□□□□□ -0.89
APOBEC3F-203ENST00000476513 MRPL55Q7Z7F7 128 aaKnown RBP9.48□□□□□ -0.89
APOBEC3F-203ENST00000476513 LINC01551Q86U37 167 aa9.48□□□□□ -0.89
APOBEC3F-203ENST00000476513 SMIM2Q9BVW6 85 aa9.48□□□□□ -0.89
APOBEC3F-203ENST00000476513 OSTCQ9NRP0 149 aa9.48□□□□□ -0.89
APOBEC3F-203ENST00000476513 TP73-AS1Q9UF72 201 aa9.48□□□□□ -0.89
APOBEC3F-203ENST00000476513 COLCA2A8K830 154 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms