RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 C5orf38Q86SI9 138 aa19.27■□□□□ 0.68
HOXB3-208ENST00000476342 GVQW2A0A096LPI5 108 aaPredicted RBP19.26■□□□□ 0.67
HOXB3-208ENST00000476342 IGHV3OR16-9A0A0B4J2B5 98 aa19.26■□□□□ 0.67
HOXB3-208ENST00000476342 HSBP1O75506 76 aa19.26■□□□□ 0.67
HOXB3-208ENST00000476342 HIGD2BQ4VC39 106 aa19.26■□□□□ 0.67
HOXB3-208ENST00000476342 APOMO95445 188 aa19.25■□□□□ 0.67
HOXB3-208ENST00000476342 SEC11AP67812 179 aa19.25■□□□□ 0.67
HOXB3-208ENST00000476342 CNBPP62633 177 aaKnown RBP19.24■□□□□ 0.67
HOXB3-208ENST00000476342 PDZD11Q5EBL8 140 aa19.24■□□□□ 0.67
HOXB3-208ENST00000476342 ATP5LO75964 103 aa19.23■□□□□ 0.67
HOXB3-208ENST00000476342 KRTAP10-1P60331 282 aa19.23■□□□□ 0.67
HOXB3-208ENST00000476342 PMVKQ15126 192 aa19.23■□□□□ 0.67
HOXB3-208ENST00000476342 FAM19A3Q7Z5A8 133 aa19.23■□□□□ 0.67
HOXB3-208ENST00000476342 TRAV16A0A0A6YYK6 109 aaPredicted RBP19.22■□□□□ 0.67
HOXB3-208ENST00000476342 ZNF561-AS1K7EIQ3 104 aa19.21■□□□□ 0.67
HOXB3-208ENST00000476342 SERF1AO75920 110 aa19.21■□□□□ 0.67
HOXB3-208ENST00000476342 HERVK_113P63121 156 aa19.2■□□□□ 0.66
HOXB3-208ENST00000476342 COX6A2Q02221 97 aa19.2■□□□□ 0.66
HOXB3-208ENST00000476342 CST9LQ9H4G1 147 aa19.2■□□□□ 0.66
HOXB3-208ENST00000476342 A0A087WZ39 114 aa19.19■□□□□ 0.66
HOXB3-208ENST00000476342 GEMIN7Q9H840 131 aaKnown RBP19.18■□□□□ 0.66
HOXB3-208ENST00000476342 HIST1H2BKO60814 126 aa19.17■□□□□ 0.66
HOXB3-208ENST00000476342 HIST1H2BJP06899 126 aa19.17■□□□□ 0.66
HOXB3-208ENST00000476342 HIST1H2BOP23527 126 aa19.17■□□□□ 0.66
HOXB3-208ENST00000476342 HIST1H2BBP33778 126 aa19.17■□□□□ 0.66
HOXB3-208ENST00000476342 HIST1H2BDP58876 126 aa19.17■□□□□ 0.66
HOXB3-208ENST00000476342 HIST1H2BCP62807 126 aa19.17■□□□□ 0.66
HOXB3-208ENST00000476342 HIST2H2BEQ16778 126 aa19.17■□□□□ 0.66
HOXB3-208ENST00000476342 LINC01620Q4KN68 170 aa19.17■□□□□ 0.66
HOXB3-208ENST00000476342 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.17■□□□□ 0.66
HOXB3-208ENST00000476342 C9orf163Q8N9P6 203 aa19.17■□□□□ 0.66
HOXB3-208ENST00000476342 HIST1H2BHQ93079 126 aa19.17■□□□□ 0.66
HOXB3-208ENST00000476342 HIST1H2BNQ99877 126 aa19.17■□□□□ 0.66
HOXB3-208ENST00000476342 HIST1H2BMQ99879 126 aa19.17■□□□□ 0.66
HOXB3-208ENST00000476342 FAM19A2Q8N3H0 131 aa19.17■□□□□ 0.66
HOXB3-208ENST00000476342 OR10D4PQ8NGN7 298 aa19.17■□□□□ 0.66
HOXB3-208ENST00000476342 A0A0J9YXV3 536 aa19.16■□□□□ 0.66
HOXB3-208ENST00000476342 CDK2AP2O75956 126 aa19.16■□□□□ 0.66
HOXB3-208ENST00000476342 SLPIP03973 132 aa19.16■□□□□ 0.66
HOXB3-208ENST00000476342 NDUFA6P56556 154 aa19.16■□□□□ 0.66
HOXB3-208ENST00000476342 LINC00310P59036 64 aa19.16■□□□□ 0.66
HOXB3-208ENST00000476342 IGHV3-64A0A075B6Q5 118 aa19.15■□□□□ 0.66
HOXB3-208ENST00000476342 LINC01561Q8N1V8 128 aa19.15■□□□□ 0.66
HOXB3-208ENST00000476342 ORAOV1Q8WV07 137 aa19.15■□□□□ 0.66
HOXB3-208ENST00000476342 TINCRA0A1B0GVN0 87 aa19.14■□□□□ 0.65
HOXB3-208ENST00000476342 SPAG11BQ08648 103 aa19.14■□□□□ 0.65
HOXB3-208ENST00000476342 LINC00526Q96FQ7 95 aa19.13■□□□□ 0.65
HOXB3-208ENST00000476342 IGLV4-69A0A075B6H9 119 aa19.12■□□□□ 0.65
HOXB3-208ENST00000476342 IFI27L1Q96BM0 104 aa19.12■□□□□ 0.65
HOXB3-208ENST00000476342 CDKN2A-AS1Q9UH64 79 aa19.1■□□□□ 0.65
HOXB3-208ENST00000476342 KIAA1109Q2LD37 5005 aa19.09■□□□□ 0.65
HOXB3-208ENST00000476342 LEPROTL1O95214 131 aa19.09■□□□□ 0.65
HOXB3-208ENST00000476342 LINC00469Q8N7U9 141 aa19.09■□□□□ 0.65
HOXB3-208ENST00000476342 C2orf48Q96LS8 159 aa19.09■□□□□ 0.65
HOXB3-208ENST00000476342 CARD19Q96LW7 228 aa19.09■□□□□ 0.65
HOXB3-208ENST00000476342 PACRGQ96M98 296 aaPredicted RBP19.09■□□□□ 0.65
HOXB3-208ENST00000476342 NUPR1O60356 82 aa19.08■□□□□ 0.65
HOXB3-208ENST00000476342 SYCNQ0VAF6 134 aa19.08■□□□□ 0.65
HOXB3-208ENST00000476342 APOBP04114 4563 aaKnown RBP19.08■□□□□ 0.65
HOXB3-208ENST00000476342 CAMK2N2Q96S95 79 aa19.08■□□□□ 0.64
HOXB3-208ENST00000476342 IGLV5-45A0A087WSX0 123 aa19.06■□□□□ 0.64
HOXB3-208ENST00000476342 IGLC3P0DOY3 106 aa19.06■□□□□ 0.64
HOXB3-208ENST00000476342 Q6ZSA8 131 aa19.06■□□□□ 0.64
HOXB3-208ENST00000476342 F8WDY8 70 aa19.05■□□□□ 0.64
HOXB3-208ENST00000476342 CHAC1Q9BUX1 264 aa19.05■□□□□ 0.64
HOXB3-208ENST00000476342 DNAH8Q96JB1 4490 aa19.04■□□□□ 0.64
HOXB3-208ENST00000476342 TRAV12-1A0A0B4J245 112 aa19.04■□□□□ 0.64
HOXB3-208ENST00000476342 FAM30AQ9NZY2 134 aa19.04■□□□□ 0.64
HOXB3-208ENST00000476342 HSPB8Q9UJY1 196 aa19.04■□□□□ 0.64
HOXB3-208ENST00000476342 SDIM1Q6ZPB5 146 aa19.03■□□□□ 0.64
HOXB3-208ENST00000476342 PKIGQ9Y2B9 76 aa19.03■□□□□ 0.64
HOXB3-208ENST00000476342 Q6ZRU5 148 aa19.02■□□□□ 0.64
HOXB3-208ENST00000476342 CHTOPQ9Y3Y2 248 aaKnown RBP19.02■□□□□ 0.64
HOXB3-208ENST00000476342 RYR1P21817 5038 aa19.02■□□□□ 0.63
HOXB3-208ENST00000476342 H3BRM9 83 aa19.01■□□□□ 0.63
HOXB3-208ENST00000476342 NDUFA1O15239 70 aa19.01■□□□□ 0.63
HOXB3-208ENST00000476342 PRSS2P07478 247 aa19.01■□□□□ 0.63
HOXB3-208ENST00000476342 XGP55808 180 aa19■□□□□ 0.63
HOXB3-208ENST00000476342 KIAA0087Q14695 138 aa19■□□□□ 0.63
HOXB3-208ENST00000476342 FABP4P15090 132 aa19■□□□□ 0.63
HOXB3-208ENST00000476342 TOMM7Q9P0U1 55 aa19■□□□□ 0.63
HOXB3-208ENST00000476342 Q8IZM0 81 aa18.99■□□□□ 0.63
HOXB3-208ENST00000476342 SMIM1B2RUZ4 78 aa18.98■□□□□ 0.63
HOXB3-208ENST00000476342 COA6Q5JTJ3 125 aaKnown RBP18.97■□□□□ 0.63
HOXB3-208ENST00000476342 MRPL35Q9NZE8 188 aaKnown RBP18.97■□□□□ 0.63
HOXB3-208ENST00000476342 ZNF22P17026 224 aaPredicted RBP18.96■□□□□ 0.63
HOXB3-208ENST00000476342 C6orf226Q5I0X4 101 aa18.96■□□□□ 0.63
HOXB3-208ENST00000476342 HSPG2P98160 4391 aa18.96■□□□□ 0.63
HOXB3-208ENST00000476342 C11orf86A6NJI1 115 aa18.95■□□□□ 0.62
HOXB3-208ENST00000476342 F8VRH5 84 aa18.95■□□□□ 0.62
HOXB3-208ENST00000476342 H0Y8G0 127 aa18.95■□□□□ 0.62
HOXB3-208ENST00000476342 RNF151Q2KHN1 245 aa18.95■□□□□ 0.62
HOXB3-208ENST00000476342 SPINK8P0C7L1 97 aa18.94■□□□□ 0.62
HOXB3-208ENST00000476342 HAMPP81172 84 aa18.94■□□□□ 0.62
HOXB3-208ENST00000476342 CKS1BP61024 79 aa18.93■□□□□ 0.62
HOXB3-208ENST00000476342 TMEM170BQ5T4T1 132 aa18.92■□□□□ 0.62
HOXB3-208ENST00000476342 UNQ6190/PRO20217Q6UXQ8 127 aa18.92■□□□□ 0.62
HOXB3-208ENST00000476342 LOC107984640A0A0U1RRK4 108 aa18.91■□□□□ 0.62
HOXB3-208ENST00000476342 MAP1LC3CQ9BXW4 147 aa18.91■□□□□ 0.62
HOXB3-208ENST00000476342 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms