RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 C6orf223Q8N319 242 aa8.54□□□□□ -1.04
HLA-F-224ENST00000475996 CHTOPQ9Y3Y2 248 aaKnown RBP8.54□□□□□ -1.04
HLA-F-224ENST00000475996 SYS1-DBNDD2H3BUS1 97 aa8.54□□□□□ -1.04
HLA-F-224ENST00000475996 COX6A2Q02221 97 aa8.54□□□□□ -1.04
HLA-F-224ENST00000475996 LINC00242Q5T6M2 205 aa8.54□□□□□ -1.04
HLA-F-224ENST00000475996 RMI2Q96E14 147 aa8.54□□□□□ -1.04
HLA-F-224ENST00000475996 PMCHL2Q9BQD1 86 aa8.54□□□□□ -1.04
HLA-F-224ENST00000475996 ODF1Q14990 250 aa8.53□□□□□ -1.04
HLA-F-224ENST00000475996 C1orf134Q5TEV5 83 aa8.53□□□□□ -1.04
HLA-F-224ENST00000475996 KRTAP26-1Q6PEX3 210 aa8.53□□□□□ -1.04
HLA-F-224ENST00000475996 NFE4Q86UQ8 179 aa8.53□□□□□ -1.04
HLA-F-224ENST00000475996 MRPL35Q9NZE8 188 aaKnown RBP8.53□□□□□ -1.04
HLA-F-224ENST00000475996 DNAH17Q9UFH2 4485 aa8.53□□□□□ -1.04
HLA-F-224ENST00000475996 IGLV4-69A0A075B6H9 119 aa8.52□□□□□ -1.05
HLA-F-224ENST00000475996 PSCAO43653 123 aa8.52□□□□□ -1.05
HLA-F-224ENST00000475996 FOXI1Q12951 378 aa8.52□□□□□ -1.05
HLA-F-224ENST00000475996 OR10D4PQ8NGN7 298 aa8.52□□□□□ -1.05
HLA-F-224ENST00000475996 TM2D2Q9BX73 214 aa8.52□□□□□ -1.05
HLA-F-224ENST00000475996 GEMIN7Q9H840 131 aaKnown RBP8.52□□□□□ -1.05
HLA-F-224ENST00000475996 TINCRA0A1B0GVN0 87 aa8.51□□□□□ -1.05
HLA-F-224ENST00000475996 F8VRH5 84 aa8.51□□□□□ -1.05
HLA-F-224ENST00000475996 CD164L2Q6UWJ8 174 aa8.51□□□□□ -1.05
HLA-F-224ENST00000475996 Q6ZRN7 208 aaPredicted RBP8.51□□□□□ -1.05
HLA-F-224ENST00000475996 FAM19A3Q7Z5A8 133 aa8.51□□□□□ -1.05
HLA-F-224ENST00000475996 C5orf38Q86SI9 138 aa8.51□□□□□ -1.05
HLA-F-224ENST00000475996 C11orf86A6NJI1 115 aa8.5□□□□□ -1.05
HLA-F-224ENST00000475996 IGLC3P0DOY3 106 aa8.5□□□□□ -1.05
HLA-F-224ENST00000475996 PET117Q6UWS5 81 aa8.5□□□□□ -1.05
HLA-F-224ENST00000475996 MAPKAPK5-AS1Q8N8E1 139 aa8.5□□□□□ -1.05
HLA-F-224ENST00000475996 CHAC1Q9BUX1 264 aa8.5□□□□□ -1.05
HLA-F-224ENST00000475996 GHRHP01286 108 aa8.49□□□□□ -1.05
HLA-F-224ENST00000475996 HERVK_113P63121 156 aa8.49□□□□□ -1.05
HLA-F-224ENST00000475996 SEC11AP67812 179 aa8.49□□□□□ -1.05
HLA-F-224ENST00000475996 LINC01545Q5VT33 79 aa8.49□□□□□ -1.05
HLA-F-224ENST00000475996 LINC00469Q8N7U9 141 aa8.49□□□□□ -1.05
HLA-F-224ENST00000475996 COX11Q9Y6N1 276 aa8.49□□□□□ -1.05
HLA-F-224ENST00000475996 IGHV3OR16-9A0A0B4J2B5 98 aa8.49□□□□□ -1.05
HLA-F-224ENST00000475996 COX7A2LO14548 114 aa8.49□□□□□ -1.05
HLA-F-224ENST00000475996 LECT2O14960 151 aa8.49□□□□□ -1.05
HLA-F-224ENST00000475996 CDKN2A-AS1Q9UH64 79 aa8.49□□□□□ -1.05
HLA-F-224ENST00000475996 HECTD4Q9Y4D8 3996 aa8.48□□□□□ -1.05
HLA-F-224ENST00000475996 RTL8CO15255 209 aa8.48□□□□□ -1.05
HLA-F-224ENST00000475996 DPM2O94777 84 aa8.48□□□□□ -1.05
HLA-F-224ENST00000475996 ZNF22P17026 224 aaPredicted RBP8.48□□□□□ -1.05
HLA-F-224ENST00000475996 C21orf62-AS1Q17RA5 79 aa8.48□□□□□ -1.05
HLA-F-224ENST00000475996 TMEM170BQ5T4T1 132 aa8.48□□□□□ -1.05
HLA-F-224ENST00000475996 RYR3Q15413 4870 aa8.47□□□□□ -1.05
HLA-F-224ENST00000475996 C20orf202A1L168 122 aa8.47□□□□□ -1.05
HLA-F-224ENST00000475996 IGKCP01834 107 aa8.47□□□□□ -1.05
HLA-F-224ENST00000475996 MALP21145 153 aa8.47□□□□□ -1.05
HLA-F-224ENST00000475996 WFDC2Q14508 124 aa8.47□□□□□ -1.05
HLA-F-224ENST00000475996 FAT2Q9NYQ8 4349 aa8.47□□□□□ -1.05
HLA-F-224ENST00000475996 IGLV5-45A0A087WSX0 123 aa8.46□□□□□ -1.05
HLA-F-224ENST00000475996 A0A087WZ39 114 aa8.46□□□□□ -1.05
HLA-F-224ENST00000475996 SPINK8P0C7L1 97 aa8.46□□□□□ -1.05
HLA-F-224ENST00000475996 PLNP26678 52 aa8.46□□□□□ -1.05
HLA-F-224ENST00000475996 USP17L23D6RBM5 183 aa8.45□□□□□ -1.06
HLA-F-224ENST00000475996 ATOH7Q8N100 152 aa8.45□□□□□ -1.06
HLA-F-224ENST00000475996 DNAH11Q96DT5 4516 aa8.45□□□□□ -1.06
HLA-F-224ENST00000475996 IGHV3-64A0A075B6Q5 118 aa8.44□□□□□ -1.06
HLA-F-224ENST00000475996 SCGB1D1O95968 90 aa8.44□□□□□ -1.06
HLA-F-224ENST00000475996 AKR1D1P51857 326 aa8.44□□□□□ -1.06
HLA-F-224ENST00000475996 HIGD2BQ4VC39 106 aa8.44□□□□□ -1.06
HLA-F-224ENST00000475996 C15orf56Q8N910 161 aa8.44□□□□□ -1.06
HLA-F-224ENST00000475996 IGHV1-58A0A0C4DH39 117 aa8.44□□□□□ -1.06
HLA-F-224ENST00000475996 LRCOL1A6NCL2 159 aa8.44□□□□□ -1.06
HLA-F-224ENST00000475996 H3BRM9 83 aa8.44□□□□□ -1.06
HLA-F-224ENST00000475996 ORAOV1Q8WV07 137 aa8.44□□□□□ -1.06
HLA-F-224ENST00000475996 SMIM1B2RUZ4 78 aa8.43□□□□□ -1.06
HLA-F-224ENST00000475996 APOMO95445 188 aa8.43□□□□□ -1.06
HLA-F-224ENST00000475996 CFAP161Q6P656 301 aa8.43□□□□□ -1.06
HLA-F-224ENST00000475996 LINC00526Q96FQ7 95 aa8.43□□□□□ -1.06
HLA-F-224ENST00000475996 A0A087WTM6 91 aa8.42□□□□□ -1.06
HLA-F-224ENST00000475996 TMEM223A0PJW6 202 aa8.42□□□□□ -1.06
HLA-F-224ENST00000475996 LINC01561Q8N1V8 128 aa8.42□□□□□ -1.06
HLA-F-224ENST00000475996 TOMM7Q9P0U1 55 aa8.42□□□□□ -1.06
HLA-F-224ENST00000475996 SPAG11BQ08648 103 aa8.41□□□□□ -1.06
HLA-F-224ENST00000475996 hDV102S1A0JD36 115 aa8.4□□□□□ -1.06
HLA-F-224ENST00000475996 JOSD1Q15040 202 aaPredicted RBP8.4□□□□□ -1.06
HLA-F-224ENST00000475996 STPG4Q8N801 248 aa8.4□□□□□ -1.06
HLA-F-224ENST00000475996 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.39□□□□□ -1.07
HLA-F-224ENST00000475996 LOC105371267A0A1B0GV96 52 aa8.39□□□□□ -1.07
HLA-F-224ENST00000475996 PYY3Q5JQD4 70 aa8.39□□□□□ -1.07
HLA-F-224ENST00000475996 GVQW2A0A096LPI5 108 aaPredicted RBP8.39□□□□□ -1.07
HLA-F-224ENST00000475996 IGLV5-39A0A0G2JS06 123 aa8.39□□□□□ -1.07
HLA-F-224ENST00000475996 ZNF561-AS1K7EIQ3 104 aa8.39□□□□□ -1.07
HLA-F-224ENST00000475996 PRSS2P07478 247 aa8.39□□□□□ -1.07
HLA-F-224ENST00000475996 SMCPP49901 116 aaPredicted RBP8.39□□□□□ -1.07
HLA-F-224ENST00000475996 HERVK_113P61574 105 aa8.39□□□□□ -1.07
HLA-F-224ENST00000475996 MAJINQ3KP22 176 aa8.39□□□□□ -1.07
HLA-F-224ENST00000475996 C14orf177Q52M58 125 aa8.39□□□□□ -1.07
HLA-F-224ENST00000475996 COX7B2Q8TF08 81 aa8.39□□□□□ -1.07
HLA-F-224ENST00000475996 FUSP35637 526 aaKnown RBP eCLIP8.38□□□□□ -1.07
HLA-F-224ENST00000475996 KIAA0087Q14695 138 aa8.38□□□□□ -1.07
HLA-F-224ENST00000475996 Q8N814 137 aa8.38□□□□□ -1.07
HLA-F-224ENST00000475996 DNAH5Q8TE73 4624 aa8.37□□□□□ -1.07
HLA-F-224ENST00000475996 ANKRD39Q53RE8 183 aa8.37□□□□□ -1.07
HLA-F-224ENST00000475996 C6orf226Q5I0X4 101 aa8.37□□□□□ -1.07
HLA-F-224ENST00000475996 CDPF1Q6NVV7 123 aa8.37□□□□□ -1.07
HLA-F-224ENST00000475996 LINC00336Q6ZUF6 198 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms