RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 TMEM241Q24JQ0 296 aa6.57□□□□□ -1.36
CDRT1-205ENST00000475944 MRPL51Q4U2R6 128 aaKnown RBP6.57□□□□□ -1.36
CDRT1-205ENST00000475944 SPANXA1Q9NS26 97 aa6.57□□□□□ -1.36
CDRT1-205ENST00000475944 TRBV24-1A0A075B6N3 115 aa6.56□□□□□ -1.36
CDRT1-205ENST00000475944 CKS2P33552 79 aa6.56□□□□□ -1.36
CDRT1-205ENST00000475944 RPL39P62891 51 aaKnown RBP6.56□□□□□ -1.36
CDRT1-205ENST00000475944 HBBP68871 147 aa6.56□□□□□ -1.36
CDRT1-205ENST00000475944 MRPS36P82909 103 aaKnown RBP6.56□□□□□ -1.36
CDRT1-205ENST00000475944 FAM19A5Q7Z5A7 132 aaPredicted RBP6.56□□□□□ -1.36
CDRT1-205ENST00000475944 A0A1B0GW15 77 aa6.55□□□□□ -1.36
CDRT1-205ENST00000475944 FAM168BA1KXE4 195 aa6.55□□□□□ -1.36
CDRT1-205ENST00000475944 IFITM10A6NMD0 228 aa6.55□□□□□ -1.36
CDRT1-205ENST00000475944 SRP19P09132 144 aaKnown RBP6.55□□□□□ -1.36
CDRT1-205ENST00000475944 FAM74A3Q4VXF1 159 aa6.55□□□□□ -1.36
CDRT1-205ENST00000475944 C10orf25Q5T742 122 aa6.55□□□□□ -1.36
CDRT1-205ENST00000475944 UNQ6190/PRO20217Q6UXQ8 127 aa6.55□□□□□ -1.36
CDRT1-205ENST00000475944 SMIM2Q9BVW6 85 aa6.55□□□□□ -1.36
CDRT1-205ENST00000475944 TGIF2-C20orf24A0A0A6YYL0 155 aa6.54□□□□□ -1.36
CDRT1-205ENST00000475944 M0QXV9 152 aa6.54□□□□□ -1.36
CDRT1-205ENST00000475944 TNFRSF6BO95407 300 aa6.54□□□□□ -1.36
CDRT1-205ENST00000475944 UBE2D1P51668 147 aa6.54□□□□□ -1.36
CDRT1-205ENST00000475944 UBE2BP63146 152 aa6.54□□□□□ -1.36
CDRT1-205ENST00000475944 GAGE2EQ4V326 116 aa6.54□□□□□ -1.36
CDRT1-205ENST00000475944 AKAP14Q86UN6 197 aa6.54□□□□□ -1.36
CDRT1-205ENST00000475944 KRTAP11-1Q8IUC1 163 aa6.54□□□□□ -1.36
CDRT1-205ENST00000475944 FAM104AQ969W3 186 aa6.54□□□□□ -1.36
CDRT1-205ENST00000475944 SMDT1Q9H4I9 107 aa6.54□□□□□ -1.36
CDRT1-205ENST00000475944 C6orf48Q9UBA6 75 aa6.54□□□□□ -1.36
CDRT1-205ENST00000475944 GAGE2DQ9UEU5 116 aa6.54□□□□□ -1.36
CDRT1-205ENST00000475944 LPAP08519 4548 aa6.53□□□□□ -1.36
CDRT1-205ENST00000475944 SMIM27A0A1W2PRY6 76 aa6.53□□□□□ -1.36
CDRT1-205ENST00000475944 RPL13AP40429 203 aaKnown RBP6.53□□□□□ -1.36
CDRT1-205ENST00000475944 RPL23P62829 140 aaKnown RBP6.53□□□□□ -1.36
CDRT1-205ENST00000475944 ADIRFQ15847 76 aa6.53□□□□□ -1.36
CDRT1-205ENST00000475944 TRBV30A0A0K0K1B3 111 aa6.52□□□□□ -1.37
CDRT1-205ENST00000475944 D6R8Y8 96 aa6.52□□□□□ -1.37
CDRT1-205ENST00000475944 F8W036 122 aa6.52□□□□□ -1.37
CDRT1-205ENST00000475944 S100A8P05109 93 aa6.52□□□□□ -1.37
CDRT1-205ENST00000475944 KRTAP1-4P0C5Y4 121 aa6.52□□□□□ -1.37
CDRT1-205ENST00000475944 IFI27P40305 119 aaPredicted RBP6.52□□□□□ -1.37
CDRT1-205ENST00000475944 NDUFC2-KCTD14E9PQ53 114 aa6.51□□□□□ -1.37
CDRT1-205ENST00000475944 NPYP01303 97 aa6.51□□□□□ -1.37
CDRT1-205ENST00000475944 PPBPP02775 128 aa6.51□□□□□ -1.37
CDRT1-205ENST00000475944 KIAA0087Q14695 138 aa6.51□□□□□ -1.37
CDRT1-205ENST00000475944 PRR4Q16378 134 aa6.51□□□□□ -1.37
CDRT1-205ENST00000475944 PACRGQ96M98 296 aaPredicted RBP6.51□□□□□ -1.37
CDRT1-205ENST00000475944 NAT8Q9UHE5 227 aa6.51□□□□□ -1.37
CDRT1-205ENST00000475944 RAB5AP20339 215 aa6.5□□□□□ -1.37
CDRT1-205ENST00000475944 MRPL54Q6P161 138 aaKnown RBP6.5□□□□□ -1.37
CDRT1-205ENST00000475944 KRTAP7-1Q8IUC3 87 aa6.5□□□□□ -1.37
CDRT1-205ENST00000475944 PYGO1Q9Y3Y4 419 aa6.5□□□□□ -1.37
CDRT1-205ENST00000475944 LINC00242Q5T6M2 205 aa6.49□□□□□ -1.37
CDRT1-205ENST00000475944 TMEM141Q96I45 108 aa6.49□□□□□ -1.37
CDRT1-205ENST00000475944 CARHSP1Q9Y2V2 147 aaKnown RBP6.49□□□□□ -1.37
CDRT1-205ENST00000475944 IGLV4-3A0A075B6K6 122 aa6.48□□□□□ -1.37
CDRT1-205ENST00000475944 A0A0U1RQV1 116 aa6.48□□□□□ -1.37
CDRT1-205ENST00000475944 A0A1B0GXF2 115 aa6.48□□□□□ -1.37
CDRT1-205ENST00000475944 C9orf129Q5T035 196 aaKnown RBP6.48□□□□□ -1.37
CDRT1-205ENST00000475944 C2orf82Q6UX34 121 aa6.48□□□□□ -1.37
CDRT1-205ENST00000475944 ORMDL3Q8N138 153 aa6.48□□□□□ -1.37
CDRT1-205ENST00000475944 LINC01561Q8N1V8 128 aa6.48□□□□□ -1.37
CDRT1-205ENST00000475944 ZNF861PO60384 105 aa6.47□□□□□ -1.37
CDRT1-205ENST00000475944 PRSS2P07478 247 aa6.47□□□□□ -1.37
CDRT1-205ENST00000475944 TEX43Q6ZNM6 134 aa6.47□□□□□ -1.37
CDRT1-205ENST00000475944 TMEM136Q6ZRR5 245 aa6.47□□□□□ -1.37
CDRT1-205ENST00000475944 C2orf88Q9BSF0 95 aa6.47□□□□□ -1.37
CDRT1-205ENST00000475944 hCG_2014768A0A024R1R8 64 aa6.46□□□□□ -1.38
CDRT1-205ENST00000475944 NUPR1O60356 82 aa6.46□□□□□ -1.38
CDRT1-205ENST00000475944 CKS1BP61024 79 aa6.46□□□□□ -1.38
CDRT1-205ENST00000475944 PEA15Q15121 130 aa6.46□□□□□ -1.38
CDRT1-205ENST00000475944 Q6ZN92 141 aa6.46□□□□□ -1.38
CDRT1-205ENST00000475944 PRELID3AQ96N28 172 aa6.46□□□□□ -1.38
CDRT1-205ENST00000475944 C9JQL5 133 aa6.45□□□□□ -1.38
CDRT1-205ENST00000475944 LBHQ53QV2 105 aaPredicted RBP6.45□□□□□ -1.38
CDRT1-205ENST00000475944 ATP5L2Q7Z4Y8 100 aa6.45□□□□□ -1.38
CDRT1-205ENST00000475944 TOMM7Q9P0U1 55 aa6.45□□□□□ -1.38
CDRT1-205ENST00000475944 CYSLTR1Q9Y271 337 aa6.45□□□□□ -1.38
CDRT1-205ENST00000475944 LAMTOR2Q9Y2Q5 125 aa6.45□□□□□ -1.38
CDRT1-205ENST00000475944 PRSS47A8MTI9 375 aa6.44□□□□□ -1.38
CDRT1-205ENST00000475944 C6orf226Q5I0X4 101 aa6.44□□□□□ -1.38
CDRT1-205ENST00000475944 MAP1LC3AQ9H492 121 aa6.44□□□□□ -1.38
CDRT1-205ENST00000475944 C22orf24Q9Y442 160 aa6.44□□□□□ -1.38
CDRT1-205ENST00000475944 LOC389332A0A1B0GUA5 103 aa6.43□□□□□ -1.38
CDRT1-205ENST00000475944 SRSF3P84103 164 aaKnown RBP6.43□□□□□ -1.38
CDRT1-205ENST00000475944 C2orf66Q6UXQ4 117 aa6.43□□□□□ -1.38
CDRT1-205ENST00000475944 Q8IZM0 81 aa6.43□□□□□ -1.38
CDRT1-205ENST00000475944 LINC00469Q8N7U9 141 aa6.43□□□□□ -1.38
CDRT1-205ENST00000475944 AMELXQ99217 191 aa6.43□□□□□ -1.38
CDRT1-205ENST00000475944 ALKBH7Q9BT30 221 aaPredicted RBP6.43□□□□□ -1.38
CDRT1-205ENST00000475944 CTDSP1Q9GZU7 261 aa6.43□□□□□ -1.38
CDRT1-205ENST00000475944 VCX2Q9H322 139 aa6.43□□□□□ -1.38
CDRT1-205ENST00000475944 TSPAN13O95857 204 aa6.42□□□□□ -1.38
CDRT1-205ENST00000475944 NPSP0C0P6 89 aa6.42□□□□□ -1.38
CDRT1-205ENST00000475944 RPL28P46779 137 aaKnown RBP6.42□□□□□ -1.38
CDRT1-205ENST00000475944 SEC11AP67812 179 aa6.42□□□□□ -1.38
CDRT1-205ENST00000475944 LINC00173Q6ZV60 143 aa6.42□□□□□ -1.38
CDRT1-205ENST00000475944 XAGE1AQ9HD64 81 aa6.42□□□□□ -1.38
CDRT1-205ENST00000475944 TP73-AS1Q9UF72 201 aa6.42□□□□□ -1.38
CDRT1-205ENST00000475944 HERVK_113P63121 156 aa6.41□□□□□ -1.38
CDRT1-205ENST00000475944 ORMDL2Q53FV1 153 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms