RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 PPP1R2P9O14990 202 aa12.22□□□□□ -0.45
VPS36-203ENST00000475375 TSPAN13O95857 204 aa12.22□□□□□ -0.45
VPS36-203ENST00000475375 SMDT1Q9H4I9 107 aa12.22□□□□□ -0.45
VPS36-203ENST00000475375 RIGQ13278 110 aa12.21□□□□□ -0.45
VPS36-203ENST00000475375 IGHV3OR16-9A0A0B4J2B5 98 aa12.2□□□□□ -0.46
VPS36-203ENST00000475375 RPL39P62891 51 aaKnown RBP12.2□□□□□ -0.46
VPS36-203ENST00000475375 SLC51BQ86UW2 128 aa12.2□□□□□ -0.46
VPS36-203ENST00000475375 KRTAP7-1Q8IUC3 87 aa12.2□□□□□ -0.46
VPS36-203ENST00000475375 CARHSP1Q9Y2V2 147 aaKnown RBP12.19□□□□□ -0.46
VPS36-203ENST00000475375 IFITM10A6NMD0 228 aa12.18□□□□□ -0.46
VPS36-203ENST00000475375 FAT4Q6V0I7 4981 aa12.18□□□□□ -0.46
VPS36-203ENST00000475375 HBBP68871 147 aa12.17□□□□□ -0.46
VPS36-203ENST00000475375 SMIM7Q9BQ49 75 aa12.17□□□□□ -0.46
VPS36-203ENST00000475375 TGIF2-C20orf24A0A0A6YYL0 155 aa12.16□□□□□ -0.46
VPS36-203ENST00000475375 LINC01551Q86U37 167 aa12.16□□□□□ -0.46
VPS36-203ENST00000475375 OSTCQ9NRP0 149 aa12.16□□□□□ -0.46
VPS36-203ENST00000475375 SPANXA1Q9NS26 97 aa12.16□□□□□ -0.46
VPS36-203ENST00000475375 TCAPO15273 167 aa12.15□□□□□ -0.46
VPS36-203ENST00000475375 MRPL51Q4U2R6 128 aaKnown RBP12.15□□□□□ -0.46
VPS36-203ENST00000475375 NDUFC2-KCTD14E9PQ53 114 aa12.14□□□□□ -0.47
VPS36-203ENST00000475375 ZNF861PO60384 105 aa12.14□□□□□ -0.47
VPS36-203ENST00000475375 FAM104AQ969W3 186 aa12.14□□□□□ -0.47
VPS36-203ENST00000475375 C20orf78Q9BR46 151 aa12.14□□□□□ -0.47
VPS36-203ENST00000475375 TRBV30A0A0K0K1B3 111 aa12.13□□□□□ -0.47
VPS36-203ENST00000475375 MRPS36P82909 103 aaKnown RBP12.13□□□□□ -0.47
VPS36-203ENST00000475375 C9orf129Q5T035 196 aaKnown RBP12.13□□□□□ -0.47
VPS36-203ENST00000475375 FAM104BQ5XKR9 115 aa12.13□□□□□ -0.47
VPS36-203ENST00000475375 C2orf82Q6UX34 121 aa12.13□□□□□ -0.47
VPS36-203ENST00000475375 PACRGQ96M98 296 aaPredicted RBP12.13□□□□□ -0.47
VPS36-203ENST00000475375 KRTAP9-6A0A140TA67 174 aa12.12□□□□□ -0.47
VPS36-203ENST00000475375 CKS2P33552 79 aa12.12□□□□□ -0.47
VPS36-203ENST00000475375 BLOC1S1P78537 153 aa12.12□□□□□ -0.47
VPS36-203ENST00000475375 KIAA0087Q14695 138 aa12.12□□□□□ -0.47
VPS36-203ENST00000475375 LCE2AQ5TA79 106 aaPredicted RBP12.12□□□□□ -0.47
VPS36-203ENST00000475375 EIF5A2Q9GZV4 153 aaKnown RBP12.12□□□□□ -0.47
VPS36-203ENST00000475375 ZNF727A8MUV8 499 aa12.11□□□□□ -0.47
VPS36-203ENST00000475375 NAT8BQ9UHF3 227 aa12.11□□□□□ -0.47
VPS36-203ENST00000475375 V9GYV3 84 aa12.11□□□□□ -0.47
VPS36-203ENST00000475375 LINC00862A6NCI5 91 aa12.1□□□□□ -0.47
VPS36-203ENST00000475375 SMIM2Q9BVW6 85 aa12.1□□□□□ -0.47
VPS36-203ENST00000475375 TRBV24-1A0A075B6N3 115 aa12.09□□□□□ -0.47
VPS36-203ENST00000475375 TNFRSF6BO95407 300 aa12.09□□□□□ -0.47
VPS36-203ENST00000475375 RPL32P62910 135 aaKnown RBP12.09□□□□□ -0.47
VPS36-203ENST00000475375 NUPR1O60356 82 aa12.08□□□□□ -0.48
VPS36-203ENST00000475375 ALKAL2Q6UX46 152 aa12.08□□□□□ -0.48
VPS36-203ENST00000475375 TYMSOSQ8TAI1 123 aa12.07□□□□□ -0.48
VPS36-203ENST00000475375 CTDSP1Q9GZU7 261 aa12.07□□□□□ -0.48
VPS36-203ENST00000475375 IFI27P40305 119 aaPredicted RBP12.06□□□□□ -0.48
VPS36-203ENST00000475375 LINC00242Q5T6M2 205 aa12.06□□□□□ -0.48
VPS36-203ENST00000475375 TCTE3Q8IZS6 198 aa12.06□□□□□ -0.48
VPS36-203ENST00000475375 LINC00469Q8N7U9 141 aa12.06□□□□□ -0.48
VPS36-203ENST00000475375 A0A087X002 238 aa12.05□□□□□ -0.48
VPS36-203ENST00000475375 D6R8Y8 96 aa12.05□□□□□ -0.48
VPS36-203ENST00000475375 LBHQ53QV2 105 aaPredicted RBP12.05□□□□□ -0.48
VPS36-203ENST00000475375 C22orf24Q9Y442 160 aa12.05□□□□□ -0.48
VPS36-203ENST00000475375 CRYGAP11844 174 aa12.04□□□□□ -0.48
VPS36-203ENST00000475375 FAM74A3Q4VXF1 159 aa12.04□□□□□ -0.48
VPS36-203ENST00000475375 NPYP01303 97 aa12.03□□□□□ -0.48
VPS36-203ENST00000475375 PRSS2P07478 247 aa12.03□□□□□ -0.48
VPS36-203ENST00000475375 RAB5AP20339 215 aa12.03□□□□□ -0.48
VPS36-203ENST00000475375 RPL28P46779 137 aaKnown RBP12.03□□□□□ -0.48
VPS36-203ENST00000475375 XAGE1AQ9HD64 81 aa12.03□□□□□ -0.48
VPS36-203ENST00000475375 TOMM7Q9P0U1 55 aa12.03□□□□□ -0.48
VPS36-203ENST00000475375 A0A1B0GW15 77 aa12.02□□□□□ -0.49
VPS36-203ENST00000475375 CKS1BP61024 79 aa12.02□□□□□ -0.49
VPS36-203ENST00000475375 TMEM141Q96I45 108 aa12.01□□□□□ -0.49
VPS36-203ENST00000475375 RETNLBQ9BQ08 111 aa12.01□□□□□ -0.49
VPS36-203ENST00000475375 IGLV4-3A0A075B6K6 122 aa12□□□□□ -0.49
VPS36-203ENST00000475375 SMIM27A0A1W2PRY6 76 aa12□□□□□ -0.49
VPS36-203ENST00000475375 F8W036 122 aa12□□□□□ -0.49
VPS36-203ENST00000475375 SRP19P09132 144 aaKnown RBP12□□□□□ -0.49
VPS36-203ENST00000475375 ADIRFQ15847 76 aa12□□□□□ -0.49
VPS36-203ENST00000475375 TEX43Q6ZNM6 134 aa12□□□□□ -0.49
VPS36-203ENST00000475375 C6orf226Q5I0X4 101 aa11.99□□□□□ -0.49
VPS36-203ENST00000475375 MRPL54Q6P161 138 aaKnown RBP11.99□□□□□ -0.49
VPS36-203ENST00000475375 C2orf88Q9BSF0 95 aa11.99□□□□□ -0.49
VPS36-203ENST00000475375 PYGO1Q9Y3Y4 419 aa11.99□□□□□ -0.49
VPS36-203ENST00000475375 BCE1O60756 84 aa11.98□□□□□ -0.49
VPS36-203ENST00000475375 S100A8P05109 93 aa11.98□□□□□ -0.49
VPS36-203ENST00000475375 RPL23P62829 140 aaKnown RBP11.98□□□□□ -0.49
VPS36-203ENST00000475375 CDIP1Q9H305 208 aa11.98□□□□□ -0.49
VPS36-203ENST00000475375 ANAPC11Q9NYG5 84 aa11.98□□□□□ -0.49
VPS36-203ENST00000475375 Q6ZN92 141 aa11.97□□□□□ -0.49
VPS36-203ENST00000475375 MRPL55Q7Z7F7 128 aaKnown RBP11.97□□□□□ -0.49
VPS36-203ENST00000475375 LINC01561Q8N1V8 128 aa11.97□□□□□ -0.49
VPS36-203ENST00000475375 PPBPP02775 128 aa11.96□□□□□ -0.49
VPS36-203ENST00000475375 ZC2HC1BQ5TFG8 222 aa11.95□□□□□ -0.5
VPS36-203ENST00000475375 ALKBH7Q9BT30 221 aaPredicted RBP11.95□□□□□ -0.5
VPS36-203ENST00000475375 ORMDL3Q8N138 153 aa11.94□□□□□ -0.5
VPS36-203ENST00000475375 TP73-AS1Q9UF72 201 aa11.94□□□□□ -0.5
VPS36-203ENST00000475375 RPL37AP8A6NKH3 93 aa11.93□□□□□ -0.5
VPS36-203ENST00000475375 TMEM136Q6ZRR5 245 aa11.93□□□□□ -0.5
VPS36-203ENST00000475375 Q8IZM0 81 aa11.93□□□□□ -0.5
VPS36-203ENST00000475375 PRELID3AQ96N28 172 aa11.93□□□□□ -0.5
VPS36-203ENST00000475375 LINC00304Q8N9R0 145 aa11.92□□□□□ -0.5
VPS36-203ENST00000475375 VCX2Q9H322 139 aa11.92□□□□□ -0.5
VPS36-203ENST00000475375 NAT8Q9UHE5 227 aa11.92□□□□□ -0.5
VPS36-203ENST00000475375 LOC389332A0A1B0GUA5 103 aa11.91□□□□□ -0.5
VPS36-203ENST00000475375 KRTAP13-2Q52LG2 175 aa11.91□□□□□ -0.5
VPS36-203ENST00000475375 IGLV7-46A0A075B6I9 117 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms