RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 WFDC9Q8NEX5 89 aa4.17□□□□□ -1.74
ECHDC1-215ENST00000475319 ZNF625Q96I27 306 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-215ENST00000475319 U3KQA8 63 aa4.17□□□□□ -1.74
ECHDC1-215ENST00000475319 UNC13CQ8NB66 2214 aa4.17□□□□□ -1.74
ECHDC1-215ENST00000475319 ZZEF1O43149 2961 aa4.17□□□□□ -1.74
ECHDC1-215ENST00000475319 LAMA1P25391 3075 aa4.17□□□□□ -1.74
ECHDC1-215ENST00000475319 C3orf84H3BNL1 204 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 IGKV1-16P04430 117 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 PDE6GP18545 87 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 PRR3P79522 188 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 C6orf99Q4VX62 202 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 C9orf116Q5BN46 136 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 LINC00308Q8TCZ7 52 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 FAM218AQ96MZ4 157 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 ASH1LQ9NR48 2969 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 MAST4O15021 2626 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 RP1P56715 2156 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 A0A087WW49 117 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 NDUFA1O15239 70 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 LINC01547P58512 204 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 DSCR9P59020 149 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 LYZP61626 148 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 DEFB109BQ30KR1 87 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 MIR7-3HGQ8N6C7 128 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 Q9HAA7 133 aa4.16□□□□□ -1.74
ECHDC1-215ENST00000475319 IGHV7-4-1A0A0J9YVY3 117 aa4.15□□□□□ -1.75
ECHDC1-215ENST00000475319 C19orf84I3L1E1 186 aa4.15□□□□□ -1.75
ECHDC1-215ENST00000475319 ELOF1P60002 83 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-215ENST00000475319 SCXQ7RTU7 201 aa4.15□□□□□ -1.75
ECHDC1-215ENST00000475319 NBEAQ8NFP9 2946 aa4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 RP1L1Q8IWN7 2480 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 PIEZO2Q9H5I5 2752 aa4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 BPY2O14599 106 aa4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 NCR3O14931 201 aa4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 CRPP02741 224 aa4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 NDPQ00604 133 aa4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 RPL39P5Q59GN2 51 aa4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 C18orf65Q6ZTR6 163 aa4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 NOTCH2NLQ7Z3S9 236 aa4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 TMEM167AQ8TBQ9 72 aa4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 LINC00167Q96N53 147 aa4.14□□□□□ -1.75
ECHDC1-215ENST00000475319 IGLV3-12A0A075B6K2 115 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 IGHV1OR15-1A0A075B7D0 117 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 LOC110117498A0A087WWA1 95 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 IGKV3D-11A0A0A0MRZ8 115 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 IGHV3-43A0A0B4J1X8 118 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 A0A0J9YXV3 536 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 TRBV6-5A0A0K0K1A5 114 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 A6NED7 52 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 H3BQ85 93 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 K7EQG2 157 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 NDUFB1O75438 58 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 IGHV3-43DP0DP04 118 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 POLR2KP53803 58 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 CDC42SE2Q9NRR3 84 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 HECTD1Q9ULT8 2610 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 LRRK1Q38SD2 2015 aa4.13□□□□□ -1.75
ECHDC1-215ENST00000475319 DOCK7Q96N67 2140 aa4.12□□□□□ -1.75
ECHDC1-215ENST00000475319 IGHV6-1A0A0B4J1U7 121 aa4.12□□□□□ -1.75
ECHDC1-215ENST00000475319 A0A1W2PNU3 283 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-215ENST00000475319 DNAJC9-AS1A6NH13 148 aa4.12□□□□□ -1.75
ECHDC1-215ENST00000475319 DEFB108AA8MXU0 73 aa4.12□□□□□ -1.75
ECHDC1-215ENST00000475319 SAA2P0DJI9 122 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-215ENST00000475319 HCP5Q6MZN7 132 aa4.12□□□□□ -1.75
ECHDC1-215ENST00000475319 CASC2Q6XLA1 102 aa4.12□□□□□ -1.75
ECHDC1-215ENST00000475319 C9orf106Q8NAJ2 232 aa4.12□□□□□ -1.75
ECHDC1-215ENST00000475319 ZNF706Q9Y5V0 76 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-215ENST00000475319 TLN1Q9Y490 2541 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-215ENST00000475319 DOPEY2Q9Y3R5 2298 aa4.12□□□□□ -1.75
ECHDC1-215ENST00000475319 PTPN13Q12923 2485 aa4.12□□□□□ -1.75
ECHDC1-215ENST00000475319 IGHV3-64A0A075B6Q5 118 aa4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 IGKV2-40A0A087WW87 121 aaPredicted RBP4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 IGKV3D-20A0A0C4DH25 116 aa4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 LCE6AA0A183 80 aa4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 IGKV2D-40P01614 121 aaPredicted RBP4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 WT1-ASQ06250 92 aa4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 C9orf129Q5T035 196 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 RPL39LQ96EH5 51 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 OCR1Q9BZK8 76 aa4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 SPTAN1Q13813 2472 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 SPEGQ15772 3267 aa4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 CREBBPQ92793 2442 aa4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 KALRNO60229 2985 aa4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 IGLV3-9A0A075B6K5 115 aa4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 A0A087WYN8 130 aa4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 HAMPP81172 84 aa4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 MOBPQ13875 183 aa4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 C9orf47Q6ZRZ4 202 aa4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 LINC00574Q9H8X3 128 aa4.11□□□□□ -1.75
ECHDC1-215ENST00000475319 CFAP46Q8IYW2 2715 aa4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 SPTBN1Q01082 2364 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 TRBV10-1A0A0K0K1A3 114 aa4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 IGKV2-29A2NJV5 120 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 A8MU10 97 aa4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 LECT2O14960 151 aa4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 LY6HO94772 140 aa4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 MGPP08493 103 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms