RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 ST20Q9HBF5 79 aa8.92□□□□□ -0.98
COL2A1-205ENST00000474996 LAMTOR2Q9Y2Q5 125 aa8.92□□□□□ -0.98
COL2A1-205ENST00000474996 ZNF561-AS1K7EIQ3 104 aa8.91□□□□□ -0.98
COL2A1-205ENST00000474996 SYCNQ0VAF6 134 aa8.91□□□□□ -0.98
COL2A1-205ENST00000474996 CD164L2Q6UWJ8 174 aa8.91□□□□□ -0.98
COL2A1-205ENST00000474996 ORMDL3Q8N138 153 aa8.91□□□□□ -0.98
COL2A1-205ENST00000474996 CDC42SE2Q9NRR3 84 aa8.91□□□□□ -0.98
COL2A1-205ENST00000474996 SRSF9Q13242 221 aaKnown RBP eCLIP8.9□□□□□ -0.98
COL2A1-205ENST00000474996 Q6ZRP5 223 aa8.9□□□□□ -0.98
COL2A1-205ENST00000474996 MRPL52Q86TS9 123 aaKnown RBP8.9□□□□□ -0.98
COL2A1-205ENST00000474996 ALKBH7Q9BT30 221 aaPredicted RBP8.9□□□□□ -0.98
COL2A1-205ENST00000474996 PRSS47A8MTI9 375 aa8.89□□□□□ -0.99
COL2A1-205ENST00000474996 C1orf196B1AJZ1 125 aa8.89□□□□□ -0.99
COL2A1-205ENST00000474996 D6R8Y8 96 aa8.89□□□□□ -0.99
COL2A1-205ENST00000474996 PPP1R17O96001 155 aa8.89□□□□□ -0.99
COL2A1-205ENST00000474996 PTTG1IPP53801 180 aa8.89□□□□□ -0.99
COL2A1-205ENST00000474996 ZNF664Q8N3J9 261 aa8.89□□□□□ -0.99
COL2A1-205ENST00000474996 NRACQ8N912 160 aa8.89□□□□□ -0.99
COL2A1-205ENST00000474996 POLR2KP53803 58 aaKnown RBP8.88□□□□□ -0.99
COL2A1-205ENST00000474996 GAGE2BQ13066 116 aa8.88□□□□□ -0.99
COL2A1-205ENST00000474996 IGLV4-69A0A075B6H9 119 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 TRBV27A0A0K0K1C4 114 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 LOC107984640A0A0U1RRK4 108 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 HIST1H2BKO60814 126 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 HIST1H2BJP06899 126 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 HIST1H2BOP23527 126 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 CKS2P33552 79 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 HIST1H2BBP33778 126 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 HIST1H2BDP58876 126 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 HIST1H2BCP62807 126 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 RPL32P62910 135 aaKnown RBP8.87□□□□□ -0.99
COL2A1-205ENST00000474996 HIST2H2BEQ16778 126 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 KIAA1644Q3SXP7 199 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.87□□□□□ -0.99
COL2A1-205ENST00000474996 HIST1H2BHQ93079 126 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 PRELID3AQ96N28 172 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 HIST1H2BNQ99877 126 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 HIST1H2BMQ99879 126 aa8.87□□□□□ -0.99
COL2A1-205ENST00000474996 NPYP01303 97 aa8.86□□□□□ -0.99
COL2A1-205ENST00000474996 MALP21145 153 aa8.86□□□□□ -0.99
COL2A1-205ENST00000474996 RAB5BP61020 215 aa8.86□□□□□ -0.99
COL2A1-205ENST00000474996 COA6Q5JTJ3 125 aaKnown RBP8.86□□□□□ -0.99
COL2A1-205ENST00000474996 C18orf32Q8TCD1 76 aa8.86□□□□□ -0.99
COL2A1-205ENST00000474996 C20orf78Q9BR46 151 aa8.86□□□□□ -0.99
COL2A1-205ENST00000474996 A0A1W2PNN7 141 aa8.85□□□□□ -0.99
COL2A1-205ENST00000474996 SMKR1H3BMG3 65 aa8.85□□□□□ -0.99
COL2A1-205ENST00000474996 COX7A2LO14548 114 aa8.85□□□□□ -0.99
COL2A1-205ENST00000474996 TNFRSF6BO95407 300 aa8.85□□□□□ -0.99
COL2A1-205ENST00000474996 RNASE13Q5GAN3 156 aaKnown RBP8.85□□□□□ -0.99
COL2A1-205ENST00000474996 FCER1GP30273 86 aa8.84□□□□□ -0.99
COL2A1-205ENST00000474996 CAMK2N2Q96S95 79 aa8.84□□□□□ -0.99
COL2A1-205ENST00000474996 LINC01546A6NGU7 62 aa8.83□□□□□ -1
COL2A1-205ENST00000474996 VCYO14598 125 aa8.83□□□□□ -1
COL2A1-205ENST00000474996 APOMO95445 188 aa8.83□□□□□ -1
COL2A1-205ENST00000474996 SUMO2P61956 95 aaKnown RBP8.83□□□□□ -1
COL2A1-205ENST00000474996 UBE2D4Q9Y2X8 147 aa8.83□□□□□ -1
COL2A1-205ENST00000474996 TRAV13-1A0A0B4J241 112 aa8.82□□□□□ -1
COL2A1-205ENST00000474996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.82□□□□□ -1
COL2A1-205ENST00000474996 K7EMI3 77 aa8.82□□□□□ -1
COL2A1-205ENST00000474996 C9orf116Q5BN46 136 aaPredicted RBP8.82□□□□□ -1
COL2A1-205ENST00000474996 C5orf38Q86SI9 138 aa8.82□□□□□ -1
COL2A1-205ENST00000474996 MAP1LC3AQ9H492 121 aa8.82□□□□□ -1
COL2A1-205ENST00000474996 NXT2Q9NPJ8 142 aaKnown RBP8.82□□□□□ -1
COL2A1-205ENST00000474996 PSORS1C2Q9UIG4 136 aa8.82□□□□□ -1
COL2A1-205ENST00000474996 CSDC2Q9Y534 153 aaKnown RBP8.82□□□□□ -1
COL2A1-205ENST00000474996 RPL18AQ02543 176 aaKnown RBP8.81□□□□□ -1
COL2A1-205ENST00000474996 C2orf48Q96LS8 159 aa8.81□□□□□ -1
COL2A1-205ENST00000474996 SMIM2Q9BVW6 85 aa8.81□□□□□ -1
COL2A1-205ENST00000474996 LINC00310P59036 64 aa8.8□□□□□ -1
COL2A1-205ENST00000474996 SMAGPQ0VAQ4 97 aa8.8□□□□□ -1
COL2A1-205ENST00000474996 Q6ZUT4 128 aa8.8□□□□□ -1
COL2A1-205ENST00000474996 PHF5AQ7RTV0 110 aaKnown RBP8.8□□□□□ -1
COL2A1-205ENST00000474996 Q8N8P6 123 aa8.8□□□□□ -1
COL2A1-205ENST00000474996 URB1-AS1Q96HZ7 61 aa8.8□□□□□ -1
COL2A1-205ENST00000474996 KIR2DL4Q99706 377 aa8.8□□□□□ -1
COL2A1-205ENST00000474996 OPRPNQ99935 248 aaPredicted RBP8.8□□□□□ -1
COL2A1-205ENST00000474996 TCAPO15273 167 aa8.79□□□□□ -1
COL2A1-205ENST00000474996 SPAG11BQ08648 103 aa8.79□□□□□ -1
COL2A1-205ENST00000474996 C1orf137Q5JT78 98 aa8.79□□□□□ -1
COL2A1-205ENST00000474996 CHCHD1Q96BP2 118 aaKnown RBP8.79□□□□□ -1
COL2A1-205ENST00000474996 IFI27P40305 119 aaPredicted RBP8.78□□□□□ -1
COL2A1-205ENST00000474996 LINC00614P0C842 121 aa8.77□□□□□ -1.01
COL2A1-205ENST00000474996 TMEM18Q96B42 140 aa8.77□□□□□ -1.01
COL2A1-205ENST00000474996 TIMM21Q9BVV7 248 aa8.77□□□□□ -1.01
COL2A1-205ENST00000474996 C5orf52A6NGY3 159 aa8.76□□□□□ -1.01
COL2A1-205ENST00000474996 SERF1AO75920 110 aa8.76□□□□□ -1.01
COL2A1-205ENST00000474996 RNF151Q2KHN1 245 aa8.76□□□□□ -1.01
COL2A1-205ENST00000474996 BAGE3Q86Y29 109 aa8.76□□□□□ -1.01
COL2A1-205ENST00000474996 OR10D4PQ8NGN7 298 aa8.76□□□□□ -1.01
COL2A1-205ENST00000474996 LPAP08519 4548 aa8.75□□□□□ -1.01
COL2A1-205ENST00000474996 S100A6P06703 90 aa8.75□□□□□ -1.01
COL2A1-205ENST00000474996 NDUFA6P56556 154 aa8.75□□□□□ -1.01
COL2A1-205ENST00000474996 RPL39P62891 51 aaKnown RBP8.75□□□□□ -1.01
COL2A1-205ENST00000474996 FA2HQ7L5A8 372 aa8.75□□□□□ -1.01
COL2A1-205ENST00000474996 ORAOV1Q8WV07 137 aa8.75□□□□□ -1.01
COL2A1-205ENST00000474996 PACRGQ96M98 296 aaPredicted RBP8.75□□□□□ -1.01
COL2A1-205ENST00000474996 LOC389332A0A1B0GUA5 103 aa8.74□□□□□ -1.01
COL2A1-205ENST00000474996 ORMDL2Q53FV1 153 aa8.74□□□□□ -1.01
COL2A1-205ENST00000474996 FAM104AQ969W3 186 aa8.74□□□□□ -1.01
COL2A1-205ENST00000474996 MRPL35Q9NZE8 188 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 227 ms