RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 PRAC1Q96KF2 57 aa4.41□□□□□ -1.7
VPS50-211ENST00000474412 OSTCQ9NRP0 149 aa4.41□□□□□ -1.7
VPS50-211ENST00000474412 FAT3Q8TDW7 4589 aa4.41□□□□□ -1.7
VPS50-211ENST00000474412 TRBV6-5A0A0K0K1A5 114 aa4.4□□□□□ -1.71
VPS50-211ENST00000474412 ESDP10768 282 aa4.4□□□□□ -1.71
VPS50-211ENST00000474412 RAB4AP20338 218 aa4.4□□□□□ -1.71
VPS50-211ENST00000474412 AMMECR1LQ6DCA0 310 aa4.4□□□□□ -1.71
VPS50-211ENST00000474412 SMIM15Q7Z3B0 74 aa4.4□□□□□ -1.71
VPS50-211ENST00000474412 CHCHD10Q8WYQ3 142 aaPredicted RBP4.4□□□□□ -1.71
VPS50-211ENST00000474412 TMEM191AQ9H0A3 160 aa4.4□□□□□ -1.71
VPS50-211ENST00000474412 TRAV8-4A0A0B4J246 113 aa4.39□□□□□ -1.71
VPS50-211ENST00000474412 I3L3M4 83 aa4.39□□□□□ -1.71
VPS50-211ENST00000474412 NDUFS6O75380 124 aaKnown RBP4.39□□□□□ -1.71
VPS50-211ENST00000474412 POLR2KP53803 58 aaKnown RBP4.39□□□□□ -1.71
VPS50-211ENST00000474412 CNBPP62633 177 aaKnown RBP4.39□□□□□ -1.71
VPS50-211ENST00000474412 PNRC1Q12796 327 aaPredicted RBP4.39□□□□□ -1.71
VPS50-211ENST00000474412 MRPL51Q4U2R6 128 aaKnown RBP4.39□□□□□ -1.71
VPS50-211ENST00000474412 TEX261Q6UWH6 196 aa4.39□□□□□ -1.71
VPS50-211ENST00000474412 SDIM1Q6ZPB5 146 aa4.39□□□□□ -1.71
VPS50-211ENST00000474412 Q6ZUT4 128 aa4.39□□□□□ -1.71
VPS50-211ENST00000474412 BORCS7Q96B45 105 aa4.39□□□□□ -1.71
VPS50-211ENST00000474412 C7orf77A4D0Y5 90 aa4.38□□□□□ -1.71
VPS50-211ENST00000474412 CCL25O15444 150 aa4.38□□□□□ -1.71
VPS50-211ENST00000474412 PMCHP20382 165 aa4.38□□□□□ -1.71
VPS50-211ENST00000474412 XCL1P47992 114 aa4.38□□□□□ -1.71
VPS50-211ENST00000474412 RPL37AP61513 92 aaKnown RBP4.38□□□□□ -1.71
VPS50-211ENST00000474412 CIRBPQ14011 172 aaKnown RBP4.38□□□□□ -1.71
VPS50-211ENST00000474412 MRPL54Q6P161 138 aaKnown RBP4.38□□□□□ -1.71
VPS50-211ENST00000474412 OR5A1Q8NGJ0 315 aa4.38□□□□□ -1.71
VPS50-211ENST00000474412 SPACA4Q8TDM5 124 aa4.38□□□□□ -1.71
VPS50-211ENST00000474412 MRAP2Q96G30 205 aa4.38□□□□□ -1.71
VPS50-211ENST00000474412 ST20Q9HBF5 79 aa4.38□□□□□ -1.71
VPS50-211ENST00000474412 NAT8Q9UHE5 227 aa4.38□□□□□ -1.71
VPS50-211ENST00000474412 A0A096LNI7 61 aa4.37□□□□□ -1.71
VPS50-211ENST00000474412 GVQW2A0A096LPI5 108 aaPredicted RBP4.37□□□□□ -1.71
VPS50-211ENST00000474412 IGKV2-24A0A0C4DH68 120 aa4.37□□□□□ -1.71
VPS50-211ENST00000474412 TRBV27A0A0K0K1C4 114 aa4.37□□□□□ -1.71
VPS50-211ENST00000474412 LINC00959A0A1B0GUT2 108 aa4.37□□□□□ -1.71
VPS50-211ENST00000474412 SMIM27A0A1W2PRY6 76 aa4.37□□□□□ -1.71
VPS50-211ENST00000474412 NPYP01303 97 aa4.37□□□□□ -1.71
VPS50-211ENST00000474412 ZNF25P17030 456 aaPredicted RBP4.37□□□□□ -1.71
VPS50-211ENST00000474412 RIGQ13278 110 aa4.37□□□□□ -1.71
VPS50-211ENST00000474412 TMEM241Q24JQ0 296 aa4.37□□□□□ -1.71
VPS50-211ENST00000474412 FAM74A3Q4VXF1 159 aa4.37□□□□□ -1.71
VPS50-211ENST00000474412 NAT8BQ9UHF3 227 aa4.37□□□□□ -1.71
VPS50-211ENST00000474412 UBE2D4Q9Y2X8 147 aa4.37□□□□□ -1.71
VPS50-211ENST00000474412 IGHV3-64A0A075B6Q5 118 aa4.36□□□□□ -1.71
VPS50-211ENST00000474412 A0A1B0GXF2 115 aa4.36□□□□□ -1.71
VPS50-211ENST00000474412 H7C423 109 aa4.36□□□□□ -1.71
VPS50-211ENST00000474412 RPL39P62891 51 aaKnown RBP4.36□□□□□ -1.71
VPS50-211ENST00000474412 COX6A2Q02221 97 aa4.36□□□□□ -1.71
VPS50-211ENST00000474412 FAM104BQ5XKR9 115 aa4.36□□□□□ -1.71
VPS50-211ENST00000474412 FAM104AQ969W3 186 aa4.36□□□□□ -1.71
VPS50-211ENST00000474412 D6R8Y8 96 aa4.35□□□□□ -1.71
VPS50-211ENST00000474412 PEA15Q15121 130 aa4.35□□□□□ -1.71
VPS50-211ENST00000474412 MRPL52Q86TS9 123 aaKnown RBP4.35□□□□□ -1.71
VPS50-211ENST00000474412 BTF3L4Q96K17 158 aa4.35□□□□□ -1.71
VPS50-211ENST00000474412 SMIM2Q9BVW6 85 aa4.35□□□□□ -1.71
VPS50-211ENST00000474412 CDC42SE2Q9NRR3 84 aa4.35□□□□□ -1.71
VPS50-211ENST00000474412 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.34□□□□□ -1.71
VPS50-211ENST00000474412 KRTAP16-1A8MUX0 517 aa4.34□□□□□ -1.71
VPS50-211ENST00000474412 PHOX2AO14813 284 aa4.34□□□□□ -1.71
VPS50-211ENST00000474412 TCAPO15273 167 aa4.34□□□□□ -1.71
VPS50-211ENST00000474412 FCER1GP30273 86 aa4.34□□□□□ -1.71
VPS50-211ENST00000474412 HBBP68871 147 aa4.34□□□□□ -1.71
VPS50-211ENST00000474412 ZNF664Q8N3J9 261 aa4.34□□□□□ -1.71
VPS50-211ENST00000474412 TMEM101Q96IK0 257 aa4.34□□□□□ -1.71
VPS50-211ENST00000474412 IGLV7-46A0A075B6I9 117 aa4.33□□□□□ -1.72
VPS50-211ENST00000474412 TRAV13-1A0A0B4J241 112 aa4.33□□□□□ -1.72
VPS50-211ENST00000474412 IGHV1-58A0A0C4DH39 117 aa4.33□□□□□ -1.72
VPS50-211ENST00000474412 MT1HL1P0DM35 61 aa4.33□□□□□ -1.72
VPS50-211ENST00000474412 ADCYAP1P18509 176 aa4.33□□□□□ -1.72
VPS50-211ENST00000474412 SS18Q15532 418 aa4.33□□□□□ -1.72
VPS50-211ENST00000474412 MAJINQ3KP22 176 aa4.33□□□□□ -1.72
VPS50-211ENST00000474412 Q6ZRU5 148 aa4.33□□□□□ -1.72
VPS50-211ENST00000474412 CARD19Q96LW7 228 aa4.33□□□□□ -1.72
VPS50-211ENST00000474412 PLAC8Q9NZF1 115 aa4.33□□□□□ -1.72
VPS50-211ENST00000474412 IGLV4-69A0A075B6H9 119 aa4.32□□□□□ -1.72
VPS50-211ENST00000474412 TRBV24-1A0A075B6N3 115 aa4.32□□□□□ -1.72
VPS50-211ENST00000474412 CKS2P33552 79 aa4.32□□□□□ -1.72
VPS50-211ENST00000474412 CD164L2Q6UWJ8 174 aa4.32□□□□□ -1.72
VPS50-211ENST00000474412 C5orf38Q86SI9 138 aa4.32□□□□□ -1.72
VPS50-211ENST00000474412 KIR2DL4Q99706 377 aa4.32□□□□□ -1.72
VPS50-211ENST00000474412 A0A0J9YXV3 536 aa4.31□□□□□ -1.72
VPS50-211ENST00000474412 PPP1R2P9O14990 202 aa4.31□□□□□ -1.72
VPS50-211ENST00000474412 RPL32P62910 135 aaKnown RBP4.31□□□□□ -1.72
VPS50-211ENST00000474412 PRR3P79522 188 aaKnown RBP4.31□□□□□ -1.72
VPS50-211ENST00000474412 IFITM2Q01629 132 aa4.31□□□□□ -1.72
VPS50-211ENST00000474412 CFAP161Q6P656 301 aa4.31□□□□□ -1.72
VPS50-211ENST00000474412 PRELID3AQ96N28 172 aa4.31□□□□□ -1.72
VPS50-211ENST00000474412 C20orf78Q9BR46 151 aa4.31□□□□□ -1.72
VPS50-211ENST00000474412 SMDT1Q9H4I9 107 aa4.31□□□□□ -1.72
VPS50-211ENST00000474412 LOC389332A0A1B0GUA5 103 aa4.3□□□□□ -1.72
VPS50-211ENST00000474412 A0A1B0GW15 77 aa4.3□□□□□ -1.72
VPS50-211ENST00000474412 LINC00862A6NCI5 91 aa4.3□□□□□ -1.72
VPS50-211ENST00000474412 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.3□□□□□ -1.72
VPS50-211ENST00000474412 COX7A2LO14548 114 aa4.3□□□□□ -1.72
VPS50-211ENST00000474412 SPAG11BQ08648 103 aa4.3□□□□□ -1.72
VPS50-211ENST00000474412 SYCNQ0VAF6 134 aa4.3□□□□□ -1.72
VPS50-211ENST00000474412 LINC00173Q6ZV60 143 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms