RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 C5orf38Q86SI9 138 aa12.88□□□□□ -0.35
HLA-B-252ENST00000474381 TMEM141Q96I45 108 aa12.88□□□□□ -0.35
HLA-B-252ENST00000474381 CARD19Q96LW7 228 aa12.88□□□□□ -0.35
HLA-B-252ENST00000474381 IGHV3OR16-9A0A0B4J2B5 98 aa12.87□□□□□ -0.35
HLA-B-252ENST00000474381 SYCNQ0VAF6 134 aa12.87□□□□□ -0.35
HLA-B-252ENST00000474381 LINC00526Q96FQ7 95 aa12.87□□□□□ -0.35
HLA-B-252ENST00000474381 CHTF8P0CG12 524 aa12.86□□□□□ -0.35
HLA-B-252ENST00000474381 NDUFA5Q16718 116 aa12.86□□□□□ -0.35
HLA-B-252ENST00000474381 OR10D4PQ8NGN7 298 aa12.86□□□□□ -0.35
HLA-B-252ENST00000474381 PRSS3P2Q8NHM4 247 aa12.86□□□□□ -0.35
HLA-B-252ENST00000474381 IGLV4-69A0A075B6H9 119 aa12.85□□□□□ -0.35
HLA-B-252ENST00000474381 KRTAP10-4P60372 401 aaPredicted RBP12.85□□□□□ -0.35
HLA-B-252ENST00000474381 Q6ZN92 141 aa12.85□□□□□ -0.35
HLA-B-252ENST00000474381 TEX43Q6ZNM6 134 aa12.85□□□□□ -0.35
HLA-B-252ENST00000474381 DPH3Q96FX2 82 aa12.85□□□□□ -0.35
HLA-B-252ENST00000474381 C2orf48Q96LS8 159 aa12.85□□□□□ -0.35
HLA-B-252ENST00000474381 A0A087WYN8 130 aa12.84□□□□□ -0.35
HLA-B-252ENST00000474381 APOC3P02656 99 aa12.84□□□□□ -0.35
HLA-B-252ENST00000474381 SVBPQ8N300 66 aa12.84□□□□□ -0.35
HLA-B-252ENST00000474381 ALKBH7Q9BT30 221 aaPredicted RBP12.84□□□□□ -0.35
HLA-B-252ENST00000474381 PLAC8Q9NZF1 115 aa12.84□□□□□ -0.35
HLA-B-252ENST00000474381 LINC00474Q9P2X8 69 aa12.84□□□□□ -0.35
HLA-B-252ENST00000474381 TGIF2-C20orf24A0A0A6YYL0 155 aa12.83□□□□□ -0.36
HLA-B-252ENST00000474381 IGIPA6NJ69 53 aa12.83□□□□□ -0.36
HLA-B-252ENST00000474381 SNAPINO95295 136 aa12.83□□□□□ -0.36
HLA-B-252ENST00000474381 C2orf88Q9BSF0 95 aa12.83□□□□□ -0.36
HLA-B-252ENST00000474381 F8WDY8 70 aa12.82□□□□□ -0.36
HLA-B-252ENST00000474381 SPAG11BQ08648 103 aa12.82□□□□□ -0.36
HLA-B-252ENST00000474381 PAPPA-AS1Q5QFB9 102 aa12.82□□□□□ -0.36
HLA-B-252ENST00000474381 LINC00242Q5T6M2 205 aa12.82□□□□□ -0.36
HLA-B-252ENST00000474381 CAMK2N2Q96S95 79 aa12.82□□□□□ -0.36
HLA-B-252ENST00000474381 AMELXQ99217 191 aa12.82□□□□□ -0.36
HLA-B-252ENST00000474381 MRPL18Q9H0U6 180 aaKnown RBP12.82□□□□□ -0.36
HLA-B-252ENST00000474381 A0A087WZ39 114 aa12.81□□□□□ -0.36
HLA-B-252ENST00000474381 LINC01549A6NIU2 74 aa12.81□□□□□ -0.36
HLA-B-252ENST00000474381 UBE2D1P51668 147 aa12.81□□□□□ -0.36
HLA-B-252ENST00000474381 RPL37AP61513 92 aaKnown RBP12.81□□□□□ -0.36
HLA-B-252ENST00000474381 Q6ZRU5 148 aa12.81□□□□□ -0.36
HLA-B-252ENST00000474381 TOMM6Q96B49 74 aa12.81□□□□□ -0.36
HLA-B-252ENST00000474381 TIMM17AQ99595 171 aa12.81□□□□□ -0.36
HLA-B-252ENST00000474381 VCX2Q9H322 139 aa12.81□□□□□ -0.36
HLA-B-252ENST00000474381 A0A096LNI7 61 aa12.8□□□□□ -0.36
HLA-B-252ENST00000474381 IGKV2-24A0A0C4DH68 120 aa12.8□□□□□ -0.36
HLA-B-252ENST00000474381 LINC01546A6NGU7 62 aa12.8□□□□□ -0.36
HLA-B-252ENST00000474381 FABP9Q0Z7S8 132 aa12.8□□□□□ -0.36
HLA-B-252ENST00000474381 MAJINQ3KP22 176 aa12.8□□□□□ -0.36
HLA-B-252ENST00000474381 LINC00173Q6ZV60 143 aa12.8□□□□□ -0.36
HLA-B-252ENST00000474381 RNF151Q2KHN1 245 aa12.79□□□□□ -0.36
HLA-B-252ENST00000474381 ORAOV1Q8WV07 137 aa12.79□□□□□ -0.36
HLA-B-252ENST00000474381 LOC107984640A0A0U1RRK4 108 aa12.78□□□□□ -0.36
HLA-B-252ENST00000474381 LINC01561Q8N1V8 128 aa12.78□□□□□ -0.36
HLA-B-252ENST00000474381 MYCBP2O75592 4640 aa12.77□□□□□ -0.36
HLA-B-252ENST00000474381 ERASQ7Z444 233 aa12.77□□□□□ -0.37
HLA-B-252ENST00000474381 FAM19A3Q7Z5A8 133 aa12.77□□□□□ -0.37
HLA-B-252ENST00000474381 STPG4Q8N801 248 aa12.77□□□□□ -0.37
HLA-B-252ENST00000474381 MRPL35Q9NZE8 188 aaKnown RBP12.76□□□□□ -0.37
HLA-B-252ENST00000474381 PTTG1IPP53801 180 aa12.75□□□□□ -0.37
HLA-B-252ENST00000474381 SEC11AP67812 179 aa12.75□□□□□ -0.37
HLA-B-252ENST00000474381 ZC2HC1BQ5TFG8 222 aa12.75□□□□□ -0.37
HLA-B-252ENST00000474381 FA2HQ7L5A8 372 aa12.75□□□□□ -0.37
HLA-B-252ENST00000474381 NDUFA1O15239 70 aa12.74□□□□□ -0.37
HLA-B-252ENST00000474381 C7orf33Q8WU49 177 aa12.74□□□□□ -0.37
HLA-B-252ENST00000474381 SCGB3A1Q96QR1 104 aa12.74□□□□□ -0.37
HLA-B-252ENST00000474381 SMCO4Q9NRQ5 59 aa12.74□□□□□ -0.37
HLA-B-252ENST00000474381 TRAPPC1Q9Y5R8 145 aa12.74□□□□□ -0.37
HLA-B-252ENST00000474381 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.73□□□□□ -0.37
HLA-B-252ENST00000474381 FLG2Q5D862 2391 aaPredicted RBP12.72□□□□□ -0.37
HLA-B-252ENST00000474381 HERVK_113P63121 156 aa12.72□□□□□ -0.37
HLA-B-252ENST00000474381 KIAA0087Q14695 138 aa12.72□□□□□ -0.37
HLA-B-252ENST00000474381 GAGE2BQ13066 116 aa12.7□□□□□ -0.38
HLA-B-252ENST00000474381 KRTAP29-1A8MX34 341 aaPredicted RBP12.69□□□□□ -0.38
HLA-B-252ENST00000474381 C18orf32Q8TCD1 76 aa12.69□□□□□ -0.38
HLA-B-252ENST00000474381 GEMIN7Q9H840 131 aaKnown RBP12.69□□□□□ -0.38
HLA-B-252ENST00000474381 TLX1NBP0CAT3 122 aa12.68□□□□□ -0.38
HLA-B-252ENST00000474381 RPL18AQ02543 176 aaKnown RBP12.68□□□□□ -0.38
HLA-B-252ENST00000474381 C10orf25Q5T742 122 aa12.68□□□□□ -0.38
HLA-B-252ENST00000474381 UNQ6190/PRO20217Q6UXQ8 127 aa12.68□□□□□ -0.38
HLA-B-252ENST00000474381 YPEL4Q96NS1 127 aa12.68□□□□□ -0.38
HLA-B-252ENST00000474381 A0A0J9YXV3 536 aa12.67□□□□□ -0.38
HLA-B-252ENST00000474381 C6orf48Q9UBA6 75 aa12.67□□□□□ -0.38
HLA-B-252ENST00000474381 TRBV30A0A0K0K1B3 111 aa12.66□□□□□ -0.38
HLA-B-252ENST00000474381 LINC00614P0C842 121 aa12.66□□□□□ -0.38
HLA-B-252ENST00000474381 CDKN2A-AS1Q9UH64 79 aa12.66□□□□□ -0.38
HLA-B-252ENST00000474381 TINCRA0A1B0GVN0 87 aa12.65□□□□□ -0.38
HLA-B-252ENST00000474381 PRSS2P07478 247 aa12.65□□□□□ -0.38
HLA-B-252ENST00000474381 HNRNPA3P51991 378 aaKnown RBP12.65□□□□□ -0.38
HLA-B-252ENST00000474381 Q8IZM0 81 aa12.65□□□□□ -0.38
HLA-B-252ENST00000474381 PACRGQ96M98 296 aaPredicted RBP12.65□□□□□ -0.38
HLA-B-252ENST00000474381 CST9LQ9H4G1 147 aa12.65□□□□□ -0.38
HLA-B-252ENST00000474381 DMBT1Q9UGM3 2413 aaPredicted RBP12.64□□□□□ -0.39
HLA-B-252ENST00000474381 J3QL48 77 aa12.64□□□□□ -0.39
HLA-B-252ENST00000474381 OXTP01178 125 aa12.64□□□□□ -0.39
HLA-B-252ENST00000474381 RAB5BP61020 215 aa12.64□□□□□ -0.39
HLA-B-252ENST00000474381 PMVKQ15126 192 aa12.64□□□□□ -0.39
HLA-B-252ENST00000474381 URB1-AS1Q96HZ7 61 aa12.64□□□□□ -0.39
HLA-B-252ENST00000474381 IGLV5-45A0A087WSX0 123 aa12.63□□□□□ -0.39
HLA-B-252ENST00000474381 PKHD1L1Q86WI1 4243 aa12.62□□□□□ -0.39
HLA-B-252ENST00000474381 A0A096LNJ9 63 aa12.62□□□□□ -0.39
HLA-B-252ENST00000474381 C9orf116Q5BN46 136 aaPredicted RBP12.62□□□□□ -0.39
HLA-B-252ENST00000474381 C6orf226Q5I0X4 101 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms