RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 UBE2D1P51668 147 aa6.9□□□□□ -1.3
EXOSC1-207ENST00000474309 C10orf25Q5T742 122 aa6.9□□□□□ -1.3
EXOSC1-207ENST00000474309 UNQ6190/PRO20217Q6UXQ8 127 aa6.9□□□□□ -1.3
EXOSC1-207ENST00000474309 LINC01551Q86U37 167 aa6.9□□□□□ -1.3
EXOSC1-207ENST00000474309 C20orf78Q9BR46 151 aa6.9□□□□□ -1.3
EXOSC1-207ENST00000474309 KRTAP9-2Q9BYQ4 174 aa6.9□□□□□ -1.3
EXOSC1-207ENST00000474309 MRPS36P82909 103 aaKnown RBP6.89□□□□□ -1.31
EXOSC1-207ENST00000474309 FAM104BQ5XKR9 115 aa6.89□□□□□ -1.31
EXOSC1-207ENST00000474309 KRTAP7-1Q8IUC3 87 aa6.89□□□□□ -1.31
EXOSC1-207ENST00000474309 FAM104AQ969W3 186 aa6.89□□□□□ -1.31
EXOSC1-207ENST00000474309 SMDT1Q9H4I9 107 aa6.89□□□□□ -1.31
EXOSC1-207ENST00000474309 SPANXA1Q9NS26 97 aa6.89□□□□□ -1.31
EXOSC1-207ENST00000474309 C6orf48Q9UBA6 75 aa6.89□□□□□ -1.31
EXOSC1-207ENST00000474309 UBE2BP63146 152 aa6.88□□□□□ -1.31
EXOSC1-207ENST00000474309 GAGE2EQ4V326 116 aa6.88□□□□□ -1.31
EXOSC1-207ENST00000474309 FAM19A5Q7Z5A7 132 aaPredicted RBP6.88□□□□□ -1.31
EXOSC1-207ENST00000474309 TCTE3Q8IZS6 198 aa6.88□□□□□ -1.31
EXOSC1-207ENST00000474309 SMIM7Q9BQ49 75 aa6.88□□□□□ -1.31
EXOSC1-207ENST00000474309 GAGE2DQ9UEU5 116 aa6.88□□□□□ -1.31
EXOSC1-207ENST00000474309 TRBV30A0A0K0K1B3 111 aa6.87□□□□□ -1.31
EXOSC1-207ENST00000474309 M0QXV9 152 aa6.87□□□□□ -1.31
EXOSC1-207ENST00000474309 RPL39P62891 51 aaKnown RBP6.87□□□□□ -1.31
EXOSC1-207ENST00000474309 KIAA0087Q14695 138 aa6.87□□□□□ -1.31
EXOSC1-207ENST00000474309 MRPL51Q4U2R6 128 aaKnown RBP6.87□□□□□ -1.31
EXOSC1-207ENST00000474309 V9GYV3 84 aa6.87□□□□□ -1.31
EXOSC1-207ENST00000474309 ZNF861PO60384 105 aa6.86□□□□□ -1.31
EXOSC1-207ENST00000474309 CEBPGP53567 150 aa6.86□□□□□ -1.31
EXOSC1-207ENST00000474309 HBBP68871 147 aa6.86□□□□□ -1.31
EXOSC1-207ENST00000474309 NAT8BQ9UHF3 227 aa6.86□□□□□ -1.31
EXOSC1-207ENST00000474309 TGIF2-C20orf24A0A0A6YYL0 155 aa6.85□□□□□ -1.31
EXOSC1-207ENST00000474309 A0A1B0GW15 77 aa6.85□□□□□ -1.31
EXOSC1-207ENST00000474309 ZNF727A8MUV8 499 aa6.85□□□□□ -1.31
EXOSC1-207ENST00000474309 NDUFC2-KCTD14E9PQ53 114 aa6.85□□□□□ -1.31
EXOSC1-207ENST00000474309 CKS2P33552 79 aa6.85□□□□□ -1.31
EXOSC1-207ENST00000474309 IFITM10A6NMD0 228 aa6.84□□□□□ -1.31
EXOSC1-207ENST00000474309 NUPR1O60356 82 aa6.84□□□□□ -1.31
EXOSC1-207ENST00000474309 TNFRSF6BO95407 300 aa6.84□□□□□ -1.31
EXOSC1-207ENST00000474309 FAM74A3Q4VXF1 159 aa6.84□□□□□ -1.31
EXOSC1-207ENST00000474309 LCE2AQ5TA79 106 aaPredicted RBP6.84□□□□□ -1.31
EXOSC1-207ENST00000474309 LINC01561Q8N1V8 128 aa6.84□□□□□ -1.31
EXOSC1-207ENST00000474309 SMIM2Q9BVW6 85 aa6.84□□□□□ -1.31
EXOSC1-207ENST00000474309 EIF5A2Q9GZV4 153 aaKnown RBP6.84□□□□□ -1.31
EXOSC1-207ENST00000474309 C9orf129Q5T035 196 aaKnown RBP6.83□□□□□ -1.32
EXOSC1-207ENST00000474309 PACRGQ96M98 296 aaPredicted RBP6.83□□□□□ -1.32
EXOSC1-207ENST00000474309 PYGO1Q9Y3Y4 419 aa6.83□□□□□ -1.32
EXOSC1-207ENST00000474309 SMIM27A0A1W2PRY6 76 aa6.82□□□□□ -1.32
EXOSC1-207ENST00000474309 SRP19P09132 144 aaKnown RBP6.82□□□□□ -1.32
EXOSC1-207ENST00000474309 LINC00242Q5T6M2 205 aa6.82□□□□□ -1.32
EXOSC1-207ENST00000474309 ALKAL2Q6UX46 152 aa6.82□□□□□ -1.32
EXOSC1-207ENST00000474309 TSPAN13O95857 204 aa6.81□□□□□ -1.32
EXOSC1-207ENST00000474309 PPBPP02775 128 aa6.81□□□□□ -1.32
EXOSC1-207ENST00000474309 IFI27P40305 119 aaPredicted RBP6.81□□□□□ -1.32
EXOSC1-207ENST00000474309 LBHQ53QV2 105 aaPredicted RBP6.81□□□□□ -1.32
EXOSC1-207ENST00000474309 C2orf82Q6UX34 121 aa6.81□□□□□ -1.32
EXOSC1-207ENST00000474309 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
EXOSC1-207ENST00000474309 D6R8Y8 96 aa6.8□□□□□ -1.32
EXOSC1-207ENST00000474309 F8W036 122 aa6.8□□□□□ -1.32
EXOSC1-207ENST00000474309 S100A8P05109 93 aa6.8□□□□□ -1.32
EXOSC1-207ENST00000474309 RPL23P62829 140 aaKnown RBP6.8□□□□□ -1.32
EXOSC1-207ENST00000474309 C22orf24Q9Y442 160 aa6.8□□□□□ -1.32
EXOSC1-207ENST00000474309 NPYP01303 97 aa6.79□□□□□ -1.32
EXOSC1-207ENST00000474309 CRYGAP11844 174 aa6.79□□□□□ -1.32
EXOSC1-207ENST00000474309 RAB5AP20339 215 aa6.79□□□□□ -1.32
EXOSC1-207ENST00000474309 TMEM141Q96I45 108 aa6.79□□□□□ -1.32
EXOSC1-207ENST00000474309 TP73-AS1Q9UF72 201 aa6.79□□□□□ -1.32
EXOSC1-207ENST00000474309 IGLV4-3A0A075B6K6 122 aa6.78□□□□□ -1.32
EXOSC1-207ENST00000474309 PRSS47A8MTI9 375 aa6.78□□□□□ -1.32
EXOSC1-207ENST00000474309 RPL28P46779 137 aaKnown RBP6.78□□□□□ -1.32
EXOSC1-207ENST00000474309 Q6ZN92 141 aa6.78□□□□□ -1.32
EXOSC1-207ENST00000474309 CTDSP1Q9GZU7 261 aa6.78□□□□□ -1.32
EXOSC1-207ENST00000474309 PRSS2P07478 247 aa6.77□□□□□ -1.33
EXOSC1-207ENST00000474309 C6orf226Q5I0X4 101 aa6.77□□□□□ -1.33
EXOSC1-207ENST00000474309 TEX43Q6ZNM6 134 aa6.77□□□□□ -1.33
EXOSC1-207ENST00000474309 TYMSOSQ8TAI1 123 aa6.77□□□□□ -1.33
EXOSC1-207ENST00000474309 A0A087X002 238 aa6.76□□□□□ -1.33
EXOSC1-207ENST00000474309 A0A1B0GXF2 115 aa6.76□□□□□ -1.33
EXOSC1-207ENST00000474309 CKS1BP61024 79 aa6.76□□□□□ -1.33
EXOSC1-207ENST00000474309 CTAG1AP78358 180 aa6.76□□□□□ -1.33
EXOSC1-207ENST00000474309 ADIRFQ15847 76 aa6.76□□□□□ -1.33
EXOSC1-207ENST00000474309 TMEM136Q6ZRR5 245 aa6.76□□□□□ -1.33
EXOSC1-207ENST00000474309 FAM19A3Q7Z5A8 133 aa6.76□□□□□ -1.33
EXOSC1-207ENST00000474309 Q8IZM0 81 aa6.76□□□□□ -1.33
EXOSC1-207ENST00000474309 ORMDL3Q8N138 153 aa6.76□□□□□ -1.33
EXOSC1-207ENST00000474309 NAT8Q9UHE5 227 aa6.76□□□□□ -1.33
EXOSC1-207ENST00000474309 KRTAP9-6A0A140TA67 174 aa6.75□□□□□ -1.33
EXOSC1-207ENST00000474309 BCE1O60756 84 aa6.75□□□□□ -1.33
EXOSC1-207ENST00000474309 NPSP0C0P6 89 aa6.75□□□□□ -1.33
EXOSC1-207ENST00000474309 AMELXQ99217 191 aa6.75□□□□□ -1.33
EXOSC1-207ENST00000474309 C2orf88Q9BSF0 95 aa6.75□□□□□ -1.33
EXOSC1-207ENST00000474309 MRPL54Q6P161 138 aaKnown RBP6.74□□□□□ -1.33
EXOSC1-207ENST00000474309 C2orf66Q6UXQ4 117 aa6.74□□□□□ -1.33
EXOSC1-207ENST00000474309 MRPL55Q7Z7F7 128 aaKnown RBP6.74□□□□□ -1.33
EXOSC1-207ENST00000474309 LINC00469Q8N7U9 141 aa6.74□□□□□ -1.33
EXOSC1-207ENST00000474309 PRELID3AQ96N28 172 aa6.74□□□□□ -1.33
EXOSC1-207ENST00000474309 VCX2Q9H322 139 aa6.74□□□□□ -1.33
EXOSC1-207ENST00000474309 LAMTOR2Q9Y2Q5 125 aa6.74□□□□□ -1.33
EXOSC1-207ENST00000474309 SEC11AP67812 179 aa6.73□□□□□ -1.33
EXOSC1-207ENST00000474309 ALKBH7Q9BT30 221 aaPredicted RBP6.73□□□□□ -1.33
EXOSC1-207ENST00000474309 XAGE1AQ9HD64 81 aa6.73□□□□□ -1.33
EXOSC1-207ENST00000474309 TOMM7Q9P0U1 55 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms