RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 FAM231CP0DMU5 169 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 IGLC3P0DOY3 106 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 S100A7P31151 101 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 CKS2P33552 79 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 BMI1P35226 326 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 LEPP41159 167 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 ASIPP42127 132 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 CDKN1BP46527 198 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 TSPEAR-AS2P59090 65 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 PKIAP61925 76 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 RPL32P62910 135 aaKnown RBP0.9□□□□□ -2.27
CCDC39-203ENST00000473854 CACNG7P62955 275 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 PAFAH1B2P68402 229 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 LRP2P98164 4655 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 DEFB114Q30KQ6 69 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 LGALS9BQ3B8N2 356 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 NSUN5P1Q3KNT7 163 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 SPANXN1Q5VSR9 72 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 LINC01545Q5VT33 79 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 LGALS9CQ6DKI2 356 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 FA2HQ7L5A8 372 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 ERASQ7Z444 233 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 ORMDL3Q8N138 153 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 C1orf158Q8N1D5 194 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 LINC01561Q8N1V8 128 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 DEFB125Q8N687 156 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 Q8N8P6 123 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 C11orf72Q8NBR9 251 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 OR2K2Q8NGT1 345 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 OR10J6PQ8NGY7 276 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 DYNLRB2Q8TF09 96 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 DEFB104AQ8WTQ1 72 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 TMEM158Q8WZ71 300 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 BORCS7Q96B45 105 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 LINC00477Q96M19 166 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 C18orf15Q96N68 181 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 AP1S3Q96PC3 154 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 C20orf144Q9BQM9 153 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 TMEM70Q9BUB7 260 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 VAMP8Q9BV40 100 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 SMIM2Q9BVW6 85 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 TTTY13Q9BZ97 58 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 MAP1LC3AQ9H492 121 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 DPH3P1Q9H4G8 78 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 MRPL16Q9NX20 251 aaKnown RBP0.9□□□□□ -2.27
CCDC39-203ENST00000473854 PHLDA3Q9Y5J5 127 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 TSSC4Q9Y5U2 329 aaPredicted RBP0.9□□□□□ -2.27
CCDC39-203ENST00000473854 TRBV6-5A0A0K0K1A5 114 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 LOC100131303A0A0U1RQF7 123 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 SDHAF1A6NFY7 115 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 C11orf86A6NJI1 115 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 OR11H12B2RN74 326 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 K7EP13 123 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 M0QY20 66 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 RS1O15537 224 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 INSP01308 110 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 CRYGDP07320 174 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 LINC00694P0DN24 101 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 COX8AP10176 69 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 S100A4P26447 101 aaKnown RBP0.89□□□□□ -2.27
CCDC39-203ENST00000473854 FCER1GP30273 86 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 TSPOP30536 169 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 POLR2KP53803 58 aaKnown RBP0.89□□□□□ -2.27
CCDC39-203ENST00000473854 EMP1P54849 157 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 NUTF2P61970 127 aaKnown RBP0.89□□□□□ -2.27
CCDC39-203ENST00000473854 SNRPD3P62318 126 aaKnown RBP0.89□□□□□ -2.27
CCDC39-203ENST00000473854 RPL39P62891 51 aaKnown RBP0.89□□□□□ -2.27
CCDC39-203ENST00000473854 DEFA6Q01524 100 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 EGFEM1PQ0D2K5 195 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 LAGE3Q14657 143 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 ZNF56Q15929 161 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 FAM74A4Q5TZK3 123 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 CFAP126Q5VTH2 177 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 SAMD13Q5VXD3 122 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 ZFP2Q6ZN57 461 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 ZNF705AQ6ZN79 300 aaPredicted RBP0.89□□□□□ -2.27
CCDC39-203ENST00000473854 Q6ZTI0 123 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 Q6ZUT4 128 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 NDUFA11Q86Y39 141 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 PCP2Q8IVA1 136 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 TEX29Q8N6K0 151 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 ZNRF2Q8NHG8 242 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 ZNF418Q8TF45 676 aaPredicted RBP0.89□□□□□ -2.27
CCDC39-203ENST00000473854 BAALCQ8WXS3 180 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 TOMM6Q96B49 74 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 MRAP2Q96G30 205 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 AMELXQ99217 191 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 CITED1Q99966 193 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 MIEN1Q9BRT3 115 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 LINC00467Q9BRT7 94 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 C2orf88Q9BSF0 95 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 MAP1LC3CQ9BXW4 147 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 EDA2RQ9HAV5 297 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 ST20Q9HBF5 79 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 MRPL35Q9NZE8 188 aaKnown RBP0.89□□□□□ -2.27
CCDC39-203ENST00000473854 XCL2Q9UBD3 114 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 UQCR10Q9UDW1 63 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 HSPB8Q9UJY1 196 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 TP53TG1Q9Y2A0 90 aa0.89□□□□□ -2.27
CCDC39-203ENST00000473854 LAMTOR2Q9Y2Q5 125 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms