RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 STPG4Q8N801 248 aa14.24□□□□□ -0.13
PTP4A1-203ENST00000473334 Q8N8P6 123 aa14.24□□□□□ -0.13
PTP4A1-203ENST00000473334 LINC00474Q9P2X8 69 aa14.24□□□□□ -0.13
PTP4A1-203ENST00000473334 PYGO1Q9Y3Y4 419 aa14.24□□□□□ -0.13
PTP4A1-203ENST00000473334 FAT3Q8TDW7 4589 aa14.24□□□□□ -0.13
PTP4A1-203ENST00000473334 LRP1Q07954 4544 aaKnown RBP14.23□□□□□ -0.13
PTP4A1-203ENST00000473334 HNRNPA3P51991 378 aaKnown RBP14.23□□□□□ -0.13
PTP4A1-203ENST00000473334 C2orf48Q96LS8 159 aa14.23□□□□□ -0.13
PTP4A1-203ENST00000473334 SEC11CQ9BY50 192 aa14.23□□□□□ -0.13
PTP4A1-203ENST00000473334 Q6ZRU5 148 aa14.22□□□□□ -0.13
PTP4A1-203ENST00000473334 C7orf33Q8WU49 177 aa14.22□□□□□ -0.13
PTP4A1-203ENST00000473334 CAMK2N2Q96S95 79 aa14.22□□□□□ -0.13
PTP4A1-203ENST00000473334 IGLV4-3A0A075B6K6 122 aa14.21□□□□□ -0.13
PTP4A1-203ENST00000473334 IGHV3OR16-9A0A0B4J2B5 98 aa14.21□□□□□ -0.13
PTP4A1-203ENST00000473334 SPAG11BQ08648 103 aa14.21□□□□□ -0.13
PTP4A1-203ENST00000473334 OR10D4PQ8NGN7 298 aa14.21□□□□□ -0.13
PTP4A1-203ENST00000473334 TRAV9-1A0A075B6T8 112 aa14.2□□□□□ -0.14
PTP4A1-203ENST00000473334 OXTP01178 125 aa14.2□□□□□ -0.14
PTP4A1-203ENST00000473334 TMEM141Q96I45 108 aa14.2□□□□□ -0.14
PTP4A1-203ENST00000473334 CYSLTR1Q9Y271 337 aa14.2□□□□□ -0.14
PTP4A1-203ENST00000473334 LOC107984640A0A0U1RRK4 108 aa14.19□□□□□ -0.14
PTP4A1-203ENST00000473334 ORMDL2Q53FV1 153 aa14.19□□□□□ -0.14
PTP4A1-203ENST00000473334 COMMD7Q86VX2 200 aa14.19□□□□□ -0.14
PTP4A1-203ENST00000473334 K7EMI3 77 aa14.18□□□□□ -0.14
PTP4A1-203ENST00000473334 C2orf66Q6UXQ4 117 aa14.18□□□□□ -0.14
PTP4A1-203ENST00000473334 ORAOV1Q8WV07 137 aa14.18□□□□□ -0.14
PTP4A1-203ENST00000473334 NXT2Q9NPJ8 142 aaKnown RBP14.18□□□□□ -0.14
PTP4A1-203ENST00000473334 TGIF2-C20orf24A0A0A6YYL0 155 aa14.17□□□□□ -0.14
PTP4A1-203ENST00000473334 PTTG1IPP53801 180 aa14.17□□□□□ -0.14
PTP4A1-203ENST00000473334 S100PP25815 95 aa14.16□□□□□ -0.14
PTP4A1-203ENST00000473334 TEX43Q6ZNM6 134 aa14.16□□□□□ -0.14
PTP4A1-203ENST00000473334 F8WDY8 70 aa14.14□□□□□ -0.15
PTP4A1-203ENST00000473334 GAGE2BQ13066 116 aa14.14□□□□□ -0.15
PTP4A1-203ENST00000473334 RNF151Q2KHN1 245 aa14.14□□□□□ -0.15
PTP4A1-203ENST00000473334 KIAA1644Q3SXP7 199 aa14.14□□□□□ -0.15
PTP4A1-203ENST00000473334 LINC00242Q5T6M2 205 aa14.14□□□□□ -0.15
PTP4A1-203ENST00000473334 Q6ZN92 141 aa14.14□□□□□ -0.15
PTP4A1-203ENST00000473334 C2orf88Q9BSF0 95 aa14.14□□□□□ -0.15
PTP4A1-203ENST00000473334 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.13□□□□□ -0.15
PTP4A1-203ENST00000473334 A0A087WZ39 114 aa14.12□□□□□ -0.15
PTP4A1-203ENST00000473334 NPSP0C0P6 89 aa14.12□□□□□ -0.15
PTP4A1-203ENST00000473334 UBE2D1P51668 147 aa14.12□□□□□ -0.15
PTP4A1-203ENST00000473334 C10orf91Q5T1B1 145 aa14.12□□□□□ -0.15
PTP4A1-203ENST00000473334 MRPL35Q9NZE8 188 aaKnown RBP14.12□□□□□ -0.15
PTP4A1-203ENST00000473334 NDUFA1O15239 70 aa14.11□□□□□ -0.15
PTP4A1-203ENST00000473334 RPL18AQ02543 176 aaKnown RBP14.11□□□□□ -0.15
PTP4A1-203ENST00000473334 LINC00173Q6ZV60 143 aa14.11□□□□□ -0.15
PTP4A1-203ENST00000473334 AMELXQ99217 191 aa14.11□□□□□ -0.15
PTP4A1-203ENST00000473334 GNB1LQ9BYB4 327 aa14.11□□□□□ -0.15
PTP4A1-203ENST00000473334 A0A0J9YXV3 536 aa14.1□□□□□ -0.15
PTP4A1-203ENST00000473334 IGIPA6NJ69 53 aa14.1□□□□□ -0.15
PTP4A1-203ENST00000473334 G0S2P27469 103 aa14.1□□□□□ -0.15
PTP4A1-203ENST00000473334 PRR3P79522 188 aaKnown RBP14.1□□□□□ -0.15
PTP4A1-203ENST00000473334 VCX2Q9H322 139 aa14.1□□□□□ -0.15
PTP4A1-203ENST00000473334 CARHSP1Q9Y2V2 147 aaKnown RBP14.1□□□□□ -0.15
PTP4A1-203ENST00000473334 RHEBQ15382 184 aa14.09□□□□□ -0.15
PTP4A1-203ENST00000473334 ZC2HC1BQ5TFG8 222 aa14.09□□□□□ -0.15
PTP4A1-203ENST00000473334 COX19Q49B96 90 aa14.08□□□□□ -0.16
PTP4A1-203ENST00000473334 PAPPA-AS1Q5QFB9 102 aa14.07□□□□□ -0.16
PTP4A1-203ENST00000473334 LINC01561Q8N1V8 128 aa14.07□□□□□ -0.16
PTP4A1-203ENST00000473334 TOMM6Q96B49 74 aa14.07□□□□□ -0.16
PTP4A1-203ENST00000473334 RPS10P5Q9NQ39 176 aa14.07□□□□□ -0.16
PTP4A1-203ENST00000473334 KIAA0087Q14695 138 aa14.06□□□□□ -0.16
PTP4A1-203ENST00000473334 C10orf25Q5T742 122 aa14.06□□□□□ -0.16
PTP4A1-203ENST00000473334 UNQ6190/PRO20217Q6UXQ8 127 aa14.06□□□□□ -0.16
PTP4A1-203ENST00000473334 TIMM17AQ99595 171 aa14.06□□□□□ -0.16
PTP4A1-203ENST00000473334 A0A1W2PNN7 141 aa14.05□□□□□ -0.16
PTP4A1-203ENST00000473334 MT-ND6P03923 174 aa14.05□□□□□ -0.16
PTP4A1-203ENST00000473334 FAM19A3Q7Z5A8 133 aa14.05□□□□□ -0.16
PTP4A1-203ENST00000473334 ALKBH7Q9BT30 221 aaPredicted RBP14.05□□□□□ -0.16
PTP4A1-203ENST00000473334 C9orf116Q5BN46 136 aaPredicted RBP14.04□□□□□ -0.16
PTP4A1-203ENST00000473334 C6orf48Q9UBA6 75 aa14.04□□□□□ -0.16
PTP4A1-203ENST00000473334 TLX1NBP0CAT3 122 aa14.03□□□□□ -0.16
PTP4A1-203ENST00000473334 LINC01546A6NGU7 62 aa14.02□□□□□ -0.17
PTP4A1-203ENST00000473334 SEC11AP67812 179 aa14.02□□□□□ -0.17
PTP4A1-203ENST00000473334 Q6ZRP5 223 aa14.02□□□□□ -0.17
PTP4A1-203ENST00000473334 MRPL18Q9H0U6 180 aaKnown RBP14.02□□□□□ -0.17
PTP4A1-203ENST00000473334 FABP9Q0Z7S8 132 aa14.01□□□□□ -0.17
PTP4A1-203ENST00000473334 ERASQ7Z444 233 aa14.01□□□□□ -0.17
PTP4A1-203ENST00000473334 SCGB3A1Q96QR1 104 aa14.01□□□□□ -0.17
PTP4A1-203ENST00000473334 TRBV30A0A0K0K1B3 111 aa14□□□□□ -0.17
PTP4A1-203ENST00000473334 LINC01549A6NIU2 74 aa14□□□□□ -0.17
PTP4A1-203ENST00000473334 HERVK_113P63121 156 aa14□□□□□ -0.17
PTP4A1-203ENST00000473334 C2orf82Q6UX34 121 aa13.99□□□□□ -0.17
PTP4A1-203ENST00000473334 PRSS2P07478 247 aa13.98□□□□□ -0.17
PTP4A1-203ENST00000473334 SERTAD4-AS1Q5TG53 156 aa13.98□□□□□ -0.17
PTP4A1-203ENST00000473334 PACRGQ96M98 296 aaPredicted RBP13.98□□□□□ -0.17
PTP4A1-203ENST00000473334 MT1HL1P0DM35 61 aa13.97□□□□□ -0.17
PTP4A1-203ENST00000473334 FA2HQ7L5A8 372 aa13.97□□□□□ -0.17
PTP4A1-203ENST00000473334 GEMIN7Q9H840 131 aaKnown RBP13.97□□□□□ -0.17
PTP4A1-203ENST00000473334 TOMM7Q9P0U1 55 aa13.97□□□□□ -0.17
PTP4A1-203ENST00000473334 PHF5AQ7RTV0 110 aaKnown RBP13.96□□□□□ -0.17
PTP4A1-203ENST00000473334 SMCO4Q9NRQ5 59 aa13.96□□□□□ -0.17
PTP4A1-203ENST00000473334 CDKN2A-AS1Q9UH64 79 aa13.96□□□□□ -0.17
PTP4A1-203ENST00000473334 APOC3P02656 99 aa13.95□□□□□ -0.18
PTP4A1-203ENST00000473334 GAGE2EQ4V326 116 aa13.95□□□□□ -0.18
PTP4A1-203ENST00000473334 SPINK6Q6UWN8 80 aa13.95□□□□□ -0.18
PTP4A1-203ENST00000473334 Q8IZM0 81 aa13.95□□□□□ -0.18
PTP4A1-203ENST00000473334 GAGE2DQ9UEU5 116 aa13.95□□□□□ -0.18
PTP4A1-203ENST00000473334 NDUFA5Q16718 116 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms