RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 LINC01546A6NGU7 62 aa4.44□□□□□ -1.7
HDAC1-205ENST00000472928 LEPROTL1O95214 131 aa4.44□□□□□ -1.7
HDAC1-205ENST00000472928 HBDP02042 147 aa4.44□□□□□ -1.7
HDAC1-205ENST00000472928 HTN3P15516 51 aa4.44□□□□□ -1.7
HDAC1-205ENST00000472928 FCER1GP30273 86 aa4.44□□□□□ -1.7
HDAC1-205ENST00000472928 RPL32P62910 135 aaKnown RBP4.44□□□□□ -1.7
HDAC1-205ENST00000472928 RPL24P83731 157 aaKnown RBP4.44□□□□□ -1.7
HDAC1-205ENST00000472928 LAGE3Q14657 143 aa4.44□□□□□ -1.7
HDAC1-205ENST00000472928 RHOHQ15669 191 aa4.44□□□□□ -1.7
HDAC1-205ENST00000472928 Q8N1X5 172 aa4.44□□□□□ -1.7
HDAC1-205ENST00000472928 SLC25A29Q8N8R3 303 aa4.44□□□□□ -1.7
HDAC1-205ENST00000472928 DEFB104AQ8WTQ1 72 aa4.44□□□□□ -1.7
HDAC1-205ENST00000472928 C18orf15Q96N68 181 aa4.44□□□□□ -1.7
HDAC1-205ENST00000472928 KIR2DL4Q99706 377 aa4.44□□□□□ -1.7
HDAC1-205ENST00000472928 SPANXB1Q9NS25 103 aaPredicted RBP4.44□□□□□ -1.7
HDAC1-205ENST00000472928 SPANXA1Q9NS26 97 aa4.44□□□□□ -1.7
HDAC1-205ENST00000472928 Q9UF83 564 aa4.44□□□□□ -1.7
HDAC1-205ENST00000472928 A0A096LNJ9 63 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 IGHV3-38A0A0C4DH36 116 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 TRBV10-1A0A0K0K1A3 114 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 TRBV27A0A0K0K1C4 114 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 LOC100131303A0A0U1RQF7 123 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 GAGE12JA6NER3 117 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.43□□□□□ -1.7
HDAC1-205ENST00000472928 VCYO14598 125 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 TSHBP01222 138 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 ATP5G1P05496 136 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 SMIM13P0DJ93 91 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 FGF6P10767 208 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 POLR2KP53803 58 aaKnown RBP4.43□□□□□ -1.7
HDAC1-205ENST00000472928 KRTAP10-2P60368 255 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 RPL36AP83881 106 aaKnown RBP4.43□□□□□ -1.7
HDAC1-205ENST00000472928 GAGE4Q13068 117 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 GAGE5Q13069 117 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 FHL2Q14192 279 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 ORMDL2Q53FV1 153 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 Q6ZR54 194 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 BOD1L2Q8IYS8 172 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 RPL36ALQ969Q0 106 aaKnown RBP4.43□□□□□ -1.7
HDAC1-205ENST00000472928 DNAJC30Q96LL9 226 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 PRADC1Q9BSG0 188 aa4.43□□□□□ -1.7
HDAC1-205ENST00000472928 TRBV7-3A0A075B6L6 115 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 TRBV6-4A0A1B0GX49 114 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 F5H768 121 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 I3L3M4 83 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 K7EMI3 77 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 GAGE6Q13070 117 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 C12orf74Q32Q52 190 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 Q6ZTC4 211 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 LINC00173Q6ZV60 143 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 ATP6V0E2Q8NHE4 81 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 ZNRF2Q8NHG8 242 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 VCX2Q9H322 139 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 HIGD1BQ9P298 99 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 ERG28Q9UKR5 140 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 CYSLTR1Q9Y271 337 aa4.42□□□□□ -1.7
HDAC1-205ENST00000472928 VPS13BQ7Z7G8 4022 aa4.41□□□□□ -1.7
HDAC1-205ENST00000472928 TRAV10A0A0B4J240 114 aa4.41□□□□□ -1.7
HDAC1-205ENST00000472928 A0A0J9YY99 117 aa4.41□□□□□ -1.7
HDAC1-205ENST00000472928 C16orf90A8MZG2 172 aa4.41□□□□□ -1.7
HDAC1-205ENST00000472928 LINC00694P0DN24 101 aa4.41□□□□□ -1.7
HDAC1-205ENST00000472928 UBE2D3P61077 147 aa4.41□□□□□ -1.7
HDAC1-205ENST00000472928 UBE2D2P62837 147 aa4.41□□□□□ -1.7
HDAC1-205ENST00000472928 C2orf66Q6UXQ4 117 aa4.41□□□□□ -1.7
HDAC1-205ENST00000472928 TM2D2Q9BX73 214 aa4.41□□□□□ -1.7
HDAC1-205ENST00000472928 PRO0255Q9UI72 69 aa4.41□□□□□ -1.7
HDAC1-205ENST00000472928 HHLA3Q9XRX5 114 aa4.41□□□□□ -1.7
HDAC1-205ENST00000472928 E9PLD3 99 aa4.4□□□□□ -1.71
HDAC1-205ENST00000472928 RPL39P62891 51 aaKnown RBP4.4□□□□□ -1.71
HDAC1-205ENST00000472928 DAZ4Q86SG3 579 aaKnown RBP4.4□□□□□ -1.71
HDAC1-205ENST00000472928 TOMM6Q96B49 74 aa4.4□□□□□ -1.71
HDAC1-205ENST00000472928 IFI27L1Q96BM0 104 aa4.4□□□□□ -1.71
HDAC1-205ENST00000472928 DAZ3Q9NR90 486 aaKnown RBP4.4□□□□□ -1.71
HDAC1-205ENST00000472928 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.39□□□□□ -1.71
HDAC1-205ENST00000472928 IGKV2-29A2NJV5 120 aaPredicted RBP4.39□□□□□ -1.71
HDAC1-205ENST00000472928 ATP5LO75964 103 aa4.39□□□□□ -1.71
HDAC1-205ENST00000472928 C20orf203Q8NBC4 194 aa4.39□□□□□ -1.71
HDAC1-205ENST00000472928 VSIG2Q96IQ7 327 aa4.39□□□□□ -1.71
HDAC1-205ENST00000472928 SCGB3A1Q96QR1 104 aa4.39□□□□□ -1.71
HDAC1-205ENST00000472928 CHCHD7Q9BUK0 85 aa4.39□□□□□ -1.71
HDAC1-205ENST00000472928 KRTAP9-2Q9BYQ4 174 aa4.39□□□□□ -1.71
HDAC1-205ENST00000472928 TP73-AS1Q9UF72 201 aa4.39□□□□□ -1.71
HDAC1-205ENST00000472928 ICOSQ9Y6W8 199 aa4.39□□□□□ -1.71
HDAC1-205ENST00000472928 HMCN2Q8NDA2 5059 aa4.39□□□□□ -1.71
HDAC1-205ENST00000472928 TRBV25-1A0A075B6N4 114 aa4.38□□□□□ -1.71
HDAC1-205ENST00000472928 A0A096LPF7 62 aa4.38□□□□□ -1.71
HDAC1-205ENST00000472928 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
HDAC1-205ENST00000472928 LINC01549A6NIU2 74 aa4.38□□□□□ -1.71
HDAC1-205ENST00000472928 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
HDAC1-205ENST00000472928 SPINK8P0C7L1 97 aa4.38□□□□□ -1.71
HDAC1-205ENST00000472928 WFDC2Q14508 124 aa4.38□□□□□ -1.71
HDAC1-205ENST00000472928 TAL2Q16559 108 aa4.38□□□□□ -1.71
HDAC1-205ENST00000472928 TMEM243Q9BU79 118 aa4.38□□□□□ -1.71
HDAC1-205ENST00000472928 PRO0461Q9UI25 63 aa4.38□□□□□ -1.71
HDAC1-205ENST00000472928 DEFB131BA0A096LNP1 70 aa4.37□□□□□ -1.71
HDAC1-205ENST00000472928 UBE2L6O14933 153 aa4.37□□□□□ -1.71
HDAC1-205ENST00000472928 PRSS1P07477 247 aa4.37□□□□□ -1.71
HDAC1-205ENST00000472928 MRPL23Q16540 153 aaKnown RBP4.37□□□□□ -1.71
HDAC1-205ENST00000472928 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
HDAC1-205ENST00000472928 C1orf134Q5TEV5 83 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms