RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SMKR1H3BMG3 65 aa5.52□□□□□ -1.53
VCL-204ENST00000472585 RAB4AP20338 218 aa5.52□□□□□ -1.53
VCL-204ENST00000472585 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
VCL-204ENST00000472585 MUC17Q685J3 4493 aa5.51□□□□□ -1.53
VCL-204ENST00000472585 KANTRA0A1W2PQU2 76 aa5.51□□□□□ -1.53
VCL-204ENST00000472585 C7orf77A4D0Y5 90 aa5.51□□□□□ -1.53
VCL-204ENST00000472585 SPAG11BQ08648 103 aa5.51□□□□□ -1.53
VCL-204ENST00000472585 UNQ6190/PRO20217Q6UXQ8 127 aa5.51□□□□□ -1.53
VCL-204ENST00000472585 Q6ZUT4 128 aa5.51□□□□□ -1.53
VCL-204ENST00000472585 TSKUQ8WUA8 353 aa5.51□□□□□ -1.53
VCL-204ENST00000472585 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
VCL-204ENST00000472585 BIN3Q9NQY0 253 aa5.51□□□□□ -1.53
VCL-204ENST00000472585 C6orf48Q9UBA6 75 aa5.51□□□□□ -1.53
VCL-204ENST00000472585 CSDC2Q9Y534 153 aaKnown RBP5.51□□□□□ -1.53
VCL-204ENST00000472585 IGHV3OR16-9A0A0B4J2B5 98 aa5.5□□□□□ -1.53
VCL-204ENST00000472585 SMIM15Q7Z3B0 74 aa5.5□□□□□ -1.53
VCL-204ENST00000472585 FAM19A5Q7Z5A7 132 aaPredicted RBP5.5□□□□□ -1.53
VCL-204ENST00000472585 AMN1Q8IY45 258 aa5.5□□□□□ -1.53
VCL-204ENST00000472585 NRACQ8N912 160 aa5.5□□□□□ -1.53
VCL-204ENST00000472585 TMEM191AQ9H0A3 160 aa5.5□□□□□ -1.53
VCL-204ENST00000472585 MRPL35Q9NZE8 188 aaKnown RBP5.5□□□□□ -1.53
VCL-204ENST00000472585 GATCO43716 136 aaKnown RBP5.49□□□□□ -1.53
VCL-204ENST00000472585 TLX1NBP0CAT3 122 aa5.49□□□□□ -1.53
VCL-204ENST00000472585 KIAA0087Q14695 138 aa5.49□□□□□ -1.53
VCL-204ENST00000472585 GAGE2EQ4V326 116 aa5.49□□□□□ -1.53
VCL-204ENST00000472585 FAM231DQ6ZW35 169 aa5.49□□□□□ -1.53
VCL-204ENST00000472585 KRTAP3-1Q9BYR8 98 aa5.49□□□□□ -1.53
VCL-204ENST00000472585 GAGE2DQ9UEU5 116 aa5.49□□□□□ -1.53
VCL-204ENST00000472585 CARHSP1Q9Y2V2 147 aaKnown RBP5.49□□□□□ -1.53
VCL-204ENST00000472585 VCYO14598 125 aa5.48□□□□□ -1.53
VCL-204ENST00000472585 LINC01547P58512 204 aaPredicted RBP5.48□□□□□ -1.53
VCL-204ENST00000472585 C9orf129Q5T035 196 aaKnown RBP5.48□□□□□ -1.53
VCL-204ENST00000472585 OR10D4PQ8NGN7 298 aa5.48□□□□□ -1.53
VCL-204ENST00000472585 ORAOV1Q8WV07 137 aa5.48□□□□□ -1.53
VCL-204ENST00000472585 FAM210AQ96ND0 272 aa5.48□□□□□ -1.53
VCL-204ENST00000472585 SMDT1Q9H4I9 107 aa5.48□□□□□ -1.53
VCL-204ENST00000472585 A0A087X002 238 aa5.47□□□□□ -1.53
VCL-204ENST00000472585 A8MWL6 223 aa5.47□□□□□ -1.53
VCL-204ENST00000472585 RPL39P62891 51 aaKnown RBP5.47□□□□□ -1.53
VCL-204ENST00000472585 IMMP2LQ96T52 175 aa5.47□□□□□ -1.53
VCL-204ENST00000472585 A0A1B0GUT8 65 aa5.46□□□□□ -1.54
VCL-204ENST00000472585 HIGD1CA8MV81 97 aa5.46□□□□□ -1.54
VCL-204ENST00000472585 M0QXV9 152 aa5.46□□□□□ -1.54
VCL-204ENST00000472585 FCER1GP30273 86 aa5.46□□□□□ -1.54
VCL-204ENST00000472585 SUMO2P61956 95 aaKnown RBP5.46□□□□□ -1.54
VCL-204ENST00000472585 TIMM21Q9BVV7 248 aa5.46□□□□□ -1.54
VCL-204ENST00000472585 NDUFA1O15239 70 aa5.45□□□□□ -1.54
VCL-204ENST00000472585 ZNF861PO60384 105 aa5.45□□□□□ -1.54
VCL-204ENST00000472585 UBE2BP63146 152 aa5.45□□□□□ -1.54
VCL-204ENST00000472585 TMEM241Q24JQ0 296 aa5.45□□□□□ -1.54
VCL-204ENST00000472585 CT83Q5H943 113 aa5.45□□□□□ -1.54
VCL-204ENST00000472585 C2orf82Q6UX34 121 aa5.45□□□□□ -1.54
VCL-204ENST00000472585 F8WDY8 70 aa5.44□□□□□ -1.54
VCL-204ENST00000472585 TEX46H3BTG2 121 aa5.44□□□□□ -1.54
VCL-204ENST00000472585 MRPL51Q4U2R6 128 aaKnown RBP5.44□□□□□ -1.54
VCL-204ENST00000472585 RETNLBQ9BQ08 111 aa5.44□□□□□ -1.54
VCL-204ENST00000472585 KRTAP4-11Q9BYQ6 195 aa5.44□□□□□ -1.54
VCL-204ENST00000472585 ANAPC11Q9NYG5 84 aa5.44□□□□□ -1.54
VCL-204ENST00000472585 TMEM250H0YL14 139 aa5.43□□□□□ -1.54
VCL-204ENST00000472585 LINC01551Q86U37 167 aa5.43□□□□□ -1.54
VCL-204ENST00000472585 CRYGAP11844 174 aa5.42□□□□□ -1.54
VCL-204ENST00000472585 TPRXLQ17RH7 258 aa5.42□□□□□ -1.54
VCL-204ENST00000472585 KRTAP13-2Q52LG2 175 aa5.42□□□□□ -1.54
VCL-204ENST00000472585 LINC00242Q5T6M2 205 aa5.42□□□□□ -1.54
VCL-204ENST00000472585 FAM104BQ5XKR9 115 aa5.42□□□□□ -1.54
VCL-204ENST00000472585 AKAP14Q86UN6 197 aa5.42□□□□□ -1.54
VCL-204ENST00000472585 TYMSOSQ8TAI1 123 aa5.42□□□□□ -1.54
VCL-204ENST00000472585 KIR2DL4Q99706 377 aa5.42□□□□□ -1.54
VCL-204ENST00000472585 KRTAP4-2Q9BYR5 136 aa5.42□□□□□ -1.54
VCL-204ENST00000472585 CTDSP1Q9GZU7 261 aa5.42□□□□□ -1.54
VCL-204ENST00000472585 C22orf24Q9Y442 160 aa5.42□□□□□ -1.54
VCL-204ENST00000472585 V9GYV3 84 aa5.42□□□□□ -1.54
VCL-204ENST00000472585 TRBV24-1A0A075B6N3 115 aa5.41□□□□□ -1.54
VCL-204ENST00000472585 NDUFC2-KCTD14E9PQ53 114 aa5.41□□□□□ -1.54
VCL-204ENST00000472585 TAGLN2P37802 199 aaKnown RBP5.41□□□□□ -1.54
VCL-204ENST00000472585 MRPS36P82909 103 aaKnown RBP5.41□□□□□ -1.54
VCL-204ENST00000472585 TCTE3Q8IZS6 198 aa5.41□□□□□ -1.54
VCL-204ENST00000472585 OSTCQ9NRP0 149 aa5.41□□□□□ -1.54
VCL-204ENST00000472585 IGLV7-46A0A075B6I9 117 aa5.4□□□□□ -1.54
VCL-204ENST00000472585 TRBV30A0A0K0K1B3 111 aa5.4□□□□□ -1.54
VCL-204ENST00000472585 IFITM10A6NMD0 228 aa5.4□□□□□ -1.54
VCL-204ENST00000472585 TCAPO15273 167 aa5.4□□□□□ -1.54
VCL-204ENST00000472585 TNFRSF6BO95407 300 aa5.4□□□□□ -1.54
VCL-204ENST00000472585 CEBPGP53567 150 aa5.4□□□□□ -1.54
VCL-204ENST00000472585 RPL32P62910 135 aaKnown RBP5.4□□□□□ -1.54
VCL-204ENST00000472585 ZC2HC1BQ5TFG8 222 aa5.4□□□□□ -1.54
VCL-204ENST00000472585 LINC00469Q8N7U9 141 aa5.4□□□□□ -1.54
VCL-204ENST00000472585 BORCS7Q96B45 105 aa5.4□□□□□ -1.54
VCL-204ENST00000472585 C20orf78Q9BR46 151 aa5.4□□□□□ -1.54
VCL-204ENST00000472585 SMAGPQ0VAQ4 97 aa5.39□□□□□ -1.55
VCL-204ENST00000472585 RIGQ13278 110 aa5.39□□□□□ -1.55
VCL-204ENST00000472585 SLC51BQ86UW2 128 aa5.39□□□□□ -1.55
VCL-204ENST00000472585 TMEM18Q96B42 140 aa5.39□□□□□ -1.55
VCL-204ENST00000472585 XAGE1AQ9HD64 81 aa5.39□□□□□ -1.55
VCL-204ENST00000472585 SPANXA1Q9NS26 97 aa5.39□□□□□ -1.55
VCL-204ENST00000472585 TMA7Q9Y2S6 64 aaKnown RBP5.39□□□□□ -1.55
VCL-204ENST00000472585 IGLV4-3A0A075B6K6 122 aa5.38□□□□□ -1.55
VCL-204ENST00000472585 ZNF727A8MUV8 499 aa5.38□□□□□ -1.55
VCL-204ENST00000472585 PPP1R17O96001 155 aa5.38□□□□□ -1.55
VCL-204ENST00000472585 NPYP01303 97 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms