RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 A0A1B0GV50 99 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 TMEM238C9JI98 176 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 K7ERU9 68 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 CCL25O15444 150 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 NDUFB4O95168 129 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 NBEAP1P0C6P0 100 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 PYYP10082 97 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 KRTAP10-10P60014 251 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 RPL36AP83881 106 aaKnown RBP3.54□□□□□ -1.84
HDAC3-206ENST00000471968 PQLC2Q6ZP29 291 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 MIR17HGQ75NE6 70 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 RPL36ALQ969Q0 106 aaKnown RBP3.54□□□□□ -1.84
HDAC3-206ENST00000471968 SMIM7Q9BQ49 75 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 JPT2Q9H910 190 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 MANBALQ9NQG1 85 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 TMEM14CQ9P0S9 112 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 GNG13Q9P2W3 67 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 LAMTOR2Q9Y2Q5 125 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 TRBV7-3A0A075B6L6 115 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 FAM168BA1KXE4 195 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 RBAKDNA6NC62 111 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 A8MWV9 139 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 CTRLP40313 264 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 CDC34P49427 236 aaPredicted RBP3.53□□□□□ -1.84
HDAC3-206ENST00000471968 RPL23P62829 140 aaKnown RBP3.53□□□□□ -1.84
HDAC3-206ENST00000471968 SUMO1P63165 101 aaKnown RBP3.53□□□□□ -1.84
HDAC3-206ENST00000471968 SERF2P84101 59 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 MEF2BQ02080 365 aaPredicted RBP3.53□□□□□ -1.84
HDAC3-206ENST00000471968 RPL18AQ02543 176 aaKnown RBP3.53□□□□□ -1.84
HDAC3-206ENST00000471968 SYCNQ0VAF6 134 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 ADIRFQ15847 76 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 BATFQ16520 125 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 GCSAMLQ5JQS6 135 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 UFSP1Q6NVU6 142 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 Q6Q795 121 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 C20orf203Q8NBC4 194 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 NUDT11Q96G61 164 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 VPS25Q9BRG1 176 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 PAM16Q9Y3D7 125 aa3.53□□□□□ -1.84
HDAC3-206ENST00000471968 IGKV2D-26A0A0A0MRZ7 120 aa3.52□□□□□ -1.85
HDAC3-206ENST00000471968 A6NJY4 79 aa3.52□□□□□ -1.85
HDAC3-206ENST00000471968 PRSS47A8MTI9 375 aa3.52□□□□□ -1.85
HDAC3-206ENST00000471968 IGLC3P0DOY3 106 aa3.52□□□□□ -1.85
HDAC3-206ENST00000471968 SCGB1A1P11684 91 aa3.52□□□□□ -1.85
HDAC3-206ENST00000471968 RNF151Q2KHN1 245 aa3.52□□□□□ -1.85
HDAC3-206ENST00000471968 COX19Q49B96 90 aa3.52□□□□□ -1.85
HDAC3-206ENST00000471968 OCIAD2Q56VL3 154 aa3.52□□□□□ -1.85
HDAC3-206ENST00000471968 Q6ZN92 141 aa3.52□□□□□ -1.85
HDAC3-206ENST00000471968 FAM19A5Q7Z5A7 132 aaPredicted RBP3.52□□□□□ -1.85
HDAC3-206ENST00000471968 SLC25A2Q9BXI2 301 aa3.52□□□□□ -1.85
HDAC3-206ENST00000471968 CST9LQ9H4G1 147 aa3.52□□□□□ -1.85
HDAC3-206ENST00000471968 OTORQ9NRC9 128 aa3.52□□□□□ -1.85
HDAC3-206ENST00000471968 TMEM167BQ9NRX6 74 aa3.52□□□□□ -1.85
HDAC3-206ENST00000471968 TRAPPC1Q9Y5R8 145 aa3.52□□□□□ -1.85
HDAC3-206ENST00000471968 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
HDAC3-206ENST00000471968 IGLV4-60A0A075B6I1 120 aa3.51□□□□□ -1.85
HDAC3-206ENST00000471968 IGKV3OR2-268A0A0C4DH90 116 aa3.51□□□□□ -1.85
HDAC3-206ENST00000471968 SERTM2A0A1B0GWG4 89 aa3.51□□□□□ -1.85
HDAC3-206ENST00000471968 HMGB3O15347 200 aaKnown RBP3.51□□□□□ -1.85
HDAC3-206ENST00000471968 CXorf1O96002 111 aa3.51□□□□□ -1.85
HDAC3-206ENST00000471968 PMCHL1Q16048 86 aa3.51□□□□□ -1.85
HDAC3-206ENST00000471968 LINC01559Q495D7 138 aa3.51□□□□□ -1.85
HDAC3-206ENST00000471968 SPATA45Q537H7 98 aa3.51□□□□□ -1.85
HDAC3-206ENST00000471968 FAM74A4Q5TZK3 123 aa3.51□□□□□ -1.85
HDAC3-206ENST00000471968 NTM-AS1Q6ZSK4 140 aa3.51□□□□□ -1.85
HDAC3-206ENST00000471968 GOLT1AQ6ZVE7 132 aa3.51□□□□□ -1.85
HDAC3-206ENST00000471968 PTH2Q96A98 100 aa3.51□□□□□ -1.85
HDAC3-206ENST00000471968 TRAV21A0A0B4J279 112 aa3.5□□□□□ -1.85
HDAC3-206ENST00000471968 CTXND1A0A1B0GTU2 59 aa3.5□□□□□ -1.85
HDAC3-206ENST00000471968 PDE6DO43924 150 aa3.5□□□□□ -1.85
HDAC3-206ENST00000471968 ARL14EPLP0DKL9 152 aa3.5□□□□□ -1.85
HDAC3-206ENST00000471968 ZNF726P1Q15940 193 aa3.5□□□□□ -1.85
HDAC3-206ENST00000471968 LINC00242Q5T6M2 205 aa3.5□□□□□ -1.85
HDAC3-206ENST00000471968 CST9LP1Q5W188 147 aa3.5□□□□□ -1.85
HDAC3-206ENST00000471968 NEXN-AS1Q8NBZ9 246 aa3.5□□□□□ -1.85
HDAC3-206ENST00000471968 TRBV10-1A0A0K0K1A3 114 aa3.49□□□□□ -1.85
HDAC3-206ENST00000471968 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.49□□□□□ -1.85
HDAC3-206ENST00000471968 SERF1AO75920 110 aa3.49□□□□□ -1.85
HDAC3-206ENST00000471968 APOMO95445 188 aa3.49□□□□□ -1.85
HDAC3-206ENST00000471968 S100A4P26447 101 aaKnown RBP3.49□□□□□ -1.85
HDAC3-206ENST00000471968 GCHFRP30047 84 aa3.49□□□□□ -1.85
HDAC3-206ENST00000471968 LINC00310P59036 64 aa3.49□□□□□ -1.85
HDAC3-206ENST00000471968 UBE2G1P62253 170 aa3.49□□□□□ -1.85
HDAC3-206ENST00000471968 VAMP3Q15836 100 aa3.49□□□□□ -1.85
HDAC3-206ENST00000471968 C4orf48Q5BLP8 95 aa3.49□□□□□ -1.85
HDAC3-206ENST00000471968 C5orf17Q8NAS9 161 aa3.49□□□□□ -1.85
HDAC3-206ENST00000471968 FXYD5Q96DB9 178 aa3.49□□□□□ -1.85
HDAC3-206ENST00000471968 SFRP2Q96HF1 295 aa3.49□□□□□ -1.85
HDAC3-206ENST00000471968 FAM167A-AS1Q96KT0 104 aa3.49□□□□□ -1.85
HDAC3-206ENST00000471968 LENEPQ9Y5L5 61 aa3.49□□□□□ -1.85
HDAC3-206ENST00000471968 TRBV25-1A0A075B6N4 114 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 A0A1B0GV72 72 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 ZNF561-AS1K7EIQ3 104 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 M0QXV9 152 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 RHODO00212 210 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 NUPR1O60356 82 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 SMIM17P0DL12 118 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 RNASE3P12724 160 aaKnown RBP3.48□□□□□ -1.85
HDAC3-206ENST00000471968 GNG5P63218 68 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 FAM229BQ4G0N7 80 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms