RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 C2orf66Q6UXQ4 117 aa9.44□□□□□ -0.9
SSR4-208ENST00000471880 Q6ZN92 141 aa9.44□□□□□ -0.9
SSR4-208ENST00000471880 SPACA4Q8TDM5 124 aa9.44□□□□□ -0.9
SSR4-208ENST00000471880 TMEM141Q96I45 108 aa9.44□□□□□ -0.9
SSR4-208ENST00000471880 NXT2Q9NPJ8 142 aaKnown RBP9.44□□□□□ -0.9
SSR4-208ENST00000471880 PKIGQ9Y2B9 76 aa9.44□□□□□ -0.9
SSR4-208ENST00000471880 IGLV4-3A0A075B6K6 122 aa9.43□□□□□ -0.9
SSR4-208ENST00000471880 TGIF2-C20orf24A0A0A6YYL0 155 aa9.43□□□□□ -0.9
SSR4-208ENST00000471880 TEX43Q6ZNM6 134 aa9.43□□□□□ -0.9
SSR4-208ENST00000471880 ORAOV1Q8WV07 137 aa9.43□□□□□ -0.9
SSR4-208ENST00000471880 C2orf88Q9BSF0 95 aa9.43□□□□□ -0.9
SSR4-208ENST00000471880 A0A096LNI7 61 aa9.42□□□□□ -0.9
SSR4-208ENST00000471880 PRSS47A8MTI9 375 aa9.42□□□□□ -0.9
SSR4-208ENST00000471880 J3QL48 77 aa9.42□□□□□ -0.9
SSR4-208ENST00000471880 KRTAP10-4P60372 401 aaPredicted RBP9.42□□□□□ -0.9
SSR4-208ENST00000471880 GAGE2BQ13066 116 aa9.42□□□□□ -0.9
SSR4-208ENST00000471880 RHEBQ15382 184 aa9.42□□□□□ -0.9
SSR4-208ENST00000471880 Q6ZRU5 148 aa9.42□□□□□ -0.9
SSR4-208ENST00000471880 STPG4Q8N801 248 aa9.42□□□□□ -0.9
SSR4-208ENST00000471880 APOC3P02656 99 aa9.41□□□□□ -0.9
SSR4-208ENST00000471880 NDUFA5Q16718 116 aa9.41□□□□□ -0.9
SSR4-208ENST00000471880 ZC2HC1BQ5TFG8 222 aa9.41□□□□□ -0.9
SSR4-208ENST00000471880 FAM104AQ969W3 186 aa9.41□□□□□ -0.9
SSR4-208ENST00000471880 PYGO1Q9Y3Y4 419 aa9.41□□□□□ -0.9
SSR4-208ENST00000471880 RPL18AQ02543 176 aaKnown RBP9.4□□□□□ -0.9
SSR4-208ENST00000471880 FABP9Q0Z7S8 132 aa9.4□□□□□ -0.9
SSR4-208ENST00000471880 CIRBPQ14011 172 aaKnown RBP9.4□□□□□ -0.9
SSR4-208ENST00000471880 C7orf33Q8WU49 177 aa9.4□□□□□ -0.9
SSR4-208ENST00000471880 GNB1LQ9BYB4 327 aa9.4□□□□□ -0.9
SSR4-208ENST00000471880 VCX2Q9H322 139 aa9.4□□□□□ -0.9
SSR4-208ENST00000471880 CARHSP1Q9Y2V2 147 aaKnown RBP9.4□□□□□ -0.9
SSR4-208ENST00000471880 LOC107984640A0A0U1RRK4 108 aa9.39□□□□□ -0.91
SSR4-208ENST00000471880 K7EMI3 77 aa9.39□□□□□ -0.91
SSR4-208ENST00000471880 OR10D4PQ8NGN7 298 aa9.39□□□□□ -0.91
SSR4-208ENST00000471880 MRPL18Q9H0U6 180 aaKnown RBP9.39□□□□□ -0.91
SSR4-208ENST00000471880 LINC00474Q9P2X8 69 aa9.39□□□□□ -0.91
SSR4-208ENST00000471880 IGHV3OR16-9A0A0B4J2B5 98 aa9.38□□□□□ -0.91
SSR4-208ENST00000471880 A0A0J9YXV3 536 aa9.38□□□□□ -0.91
SSR4-208ENST00000471880 G0S2P27469 103 aa9.38□□□□□ -0.91
SSR4-208ENST00000471880 COX19Q49B96 90 aa9.38□□□□□ -0.91
SSR4-208ENST00000471880 C10orf91Q5T1B1 145 aa9.38□□□□□ -0.91
SSR4-208ENST00000471880 C2orf48Q96LS8 159 aa9.38□□□□□ -0.91
SSR4-208ENST00000471880 SMCO4Q9NRQ5 59 aa9.38□□□□□ -0.91
SSR4-208ENST00000471880 PLAC8Q9NZF1 115 aa9.38□□□□□ -0.91
SSR4-208ENST00000471880 MT-ND6P03923 174 aa9.37□□□□□ -0.91
SSR4-208ENST00000471880 LINC00242Q5T6M2 205 aa9.37□□□□□ -0.91
SSR4-208ENST00000471880 FA2HQ7L5A8 372 aa9.37□□□□□ -0.91
SSR4-208ENST00000471880 NDUFA1O15239 70 aa9.36□□□□□ -0.91
SSR4-208ENST00000471880 SNAPINO95295 136 aa9.36□□□□□ -0.91
SSR4-208ENST00000471880 UBE2D1P51668 147 aa9.36□□□□□ -0.91
SSR4-208ENST00000471880 PAPPA-AS1Q5QFB9 102 aa9.36□□□□□ -0.91
SSR4-208ENST00000471880 SCGB3A1Q96QR1 104 aa9.36□□□□□ -0.91
SSR4-208ENST00000471880 ALKBH7Q9BT30 221 aaPredicted RBP9.36□□□□□ -0.91
SSR4-208ENST00000471880 LRP1Q07954 4544 aaKnown RBP9.36□□□□□ -0.91
SSR4-208ENST00000471880 PTTG1IPP53801 180 aa9.35□□□□□ -0.91
SSR4-208ENST00000471880 SVBPQ8N300 66 aa9.35□□□□□ -0.91
SSR4-208ENST00000471880 TOMM7Q9P0U1 55 aa9.35□□□□□ -0.91
SSR4-208ENST00000471880 A0A087WZ39 114 aa9.34□□□□□ -0.91
SSR4-208ENST00000471880 TOMM6Q96B49 74 aa9.34□□□□□ -0.91
SSR4-208ENST00000471880 GEMIN7Q9H840 131 aaKnown RBP9.34□□□□□ -0.91
SSR4-208ENST00000471880 TRAPPC1Q9Y5R8 145 aa9.34□□□□□ -0.91
SSR4-208ENST00000471880 IGIPA6NJ69 53 aa9.33□□□□□ -0.92
SSR4-208ENST00000471880 PRSS2P07478 247 aa9.33□□□□□ -0.92
SSR4-208ENST00000471880 HNRNPA3P51991 378 aaKnown RBP9.33□□□□□ -0.92
SSR4-208ENST00000471880 UNQ6190/PRO20217Q6UXQ8 127 aa9.33□□□□□ -0.92
SSR4-208ENST00000471880 LINC00173Q6ZV60 143 aa9.33□□□□□ -0.92
SSR4-208ENST00000471880 PACRGQ96M98 296 aaPredicted RBP9.33□□□□□ -0.92
SSR4-208ENST00000471880 AMELXQ99217 191 aa9.33□□□□□ -0.92
SSR4-208ENST00000471880 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.32□□□□□ -0.92
SSR4-208ENST00000471880 C10orf25Q5T742 122 aa9.32□□□□□ -0.92
SSR4-208ENST00000471880 TIMM17AQ99595 171 aa9.32□□□□□ -0.92
SSR4-208ENST00000471880 NPSP0C0P6 89 aa9.31□□□□□ -0.92
SSR4-208ENST00000471880 ERASQ7Z444 233 aa9.31□□□□□ -0.92
SSR4-208ENST00000471880 MRPL35Q9NZE8 188 aaKnown RBP9.31□□□□□ -0.92
SSR4-208ENST00000471880 F8WDY8 70 aa9.3□□□□□ -0.92
SSR4-208ENST00000471880 HERVK_113P63121 156 aa9.3□□□□□ -0.92
SSR4-208ENST00000471880 SEC11AP67812 179 aa9.3□□□□□ -0.92
SSR4-208ENST00000471880 RNF151Q2KHN1 245 aa9.3□□□□□ -0.92
SSR4-208ENST00000471880 GAGE2EQ4V326 116 aa9.3□□□□□ -0.92
SSR4-208ENST00000471880 C2orf82Q6UX34 121 aa9.3□□□□□ -0.92
SSR4-208ENST00000471880 GAGE2DQ9UEU5 116 aa9.3□□□□□ -0.92
SSR4-208ENST00000471880 PKHD1L1Q86WI1 4243 aa9.3□□□□□ -0.92
SSR4-208ENST00000471880 KRTAP29-1A8MX34 341 aaPredicted RBP9.29□□□□□ -0.92
SSR4-208ENST00000471880 NDUFA6P56556 154 aa9.29□□□□□ -0.92
SSR4-208ENST00000471880 CKS1BP61024 79 aa9.29□□□□□ -0.92
SSR4-208ENST00000471880 C9orf116Q5BN46 136 aaPredicted RBP9.29□□□□□ -0.92
SSR4-208ENST00000471880 C6orf226Q5I0X4 101 aa9.29□□□□□ -0.92
SSR4-208ENST00000471880 LINC00469Q8N7U9 141 aa9.29□□□□□ -0.92
SSR4-208ENST00000471880 C6orf48Q9UBA6 75 aa9.29□□□□□ -0.92
SSR4-208ENST00000471880 FAT3Q8TDW7 4589 aa9.29□□□□□ -0.92
SSR4-208ENST00000471880 CDKN2A-AS1Q9UH64 79 aa9.28□□□□□ -0.92
SSR4-208ENST00000471880 A0A1W2PNN7 141 aa9.27□□□□□ -0.93
SSR4-208ENST00000471880 LINC01549A6NIU2 74 aa9.27□□□□□ -0.93
SSR4-208ENST00000471880 PRR3P79522 188 aaKnown RBP9.27□□□□□ -0.93
SSR4-208ENST00000471880 OXTP01178 125 aa9.26□□□□□ -0.93
SSR4-208ENST00000471880 KIAA0087Q14695 138 aa9.26□□□□□ -0.93
SSR4-208ENST00000471880 PMCHL1Q16048 86 aa9.26□□□□□ -0.93
SSR4-208ENST00000471880 FAM19A5Q7Z5A7 132 aaPredicted RBP9.26□□□□□ -0.93
SSR4-208ENST00000471880 LINC01561Q8N1V8 128 aa9.26□□□□□ -0.93
SSR4-208ENST00000471880 C18orf32Q8TCD1 76 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms