RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 NPYP01303 97 aa4.96□□□□□ -1.62
USP48-207ENST00000471752 FCER1GP30273 86 aa4.96□□□□□ -1.62
USP48-207ENST00000471752 RIGQ13278 110 aa4.96□□□□□ -1.62
USP48-207ENST00000471752 MRPL54Q6P161 138 aaKnown RBP4.96□□□□□ -1.62
USP48-207ENST00000471752 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
USP48-207ENST00000471752 C1orf196B1AJZ1 125 aa4.95□□□□□ -1.62
USP48-207ENST00000471752 D6R8Y8 96 aa4.95□□□□□ -1.62
USP48-207ENST00000471752 COX7A2LO14548 114 aa4.95□□□□□ -1.62
USP48-207ENST00000471752 TNFRSF6BO95407 300 aa4.95□□□□□ -1.62
USP48-207ENST00000471752 C9orf116Q5BN46 136 aaPredicted RBP4.95□□□□□ -1.62
USP48-207ENST00000471752 UNQ6190/PRO20217Q6UXQ8 127 aa4.95□□□□□ -1.62
USP48-207ENST00000471752 BORCS7Q96B45 105 aa4.95□□□□□ -1.62
USP48-207ENST00000471752 NAT8BQ9UHF3 227 aa4.95□□□□□ -1.62
USP48-207ENST00000471752 PSORS1C2Q9UIG4 136 aa4.95□□□□□ -1.62
USP48-207ENST00000471752 MUC2Q02817 5179 aa4.95□□□□□ -1.62
USP48-207ENST00000471752 TRBV24-1A0A075B6N3 115 aa4.94□□□□□ -1.62
USP48-207ENST00000471752 A0A1B0GXF2 115 aa4.94□□□□□ -1.62
USP48-207ENST00000471752 MALP21145 153 aa4.94□□□□□ -1.62
USP48-207ENST00000471752 CKS2P33552 79 aa4.94□□□□□ -1.62
USP48-207ENST00000471752 CAMK2N2Q96S95 79 aa4.94□□□□□ -1.62
USP48-207ENST00000471752 NAT8Q9UHE5 227 aa4.94□□□□□ -1.62
USP48-207ENST00000471752 CSDC2Q9Y534 153 aaKnown RBP4.94□□□□□ -1.62
USP48-207ENST00000471752 IGHV3OR16-9A0A0B4J2B5 98 aa4.93□□□□□ -1.62
USP48-207ENST00000471752 LOC107984640A0A0U1RRK4 108 aa4.93□□□□□ -1.62
USP48-207ENST00000471752 RPL18AQ02543 176 aaKnown RBP4.93□□□□□ -1.62
USP48-207ENST00000471752 KIAA0087Q14695 138 aa4.93□□□□□ -1.62
USP48-207ENST00000471752 SPINK6Q6UWN8 80 aa4.93□□□□□ -1.62
USP48-207ENST00000471752 TMEM238LA0A1B0GVL6 79 aa4.92□□□□□ -1.62
USP48-207ENST00000471752 APOMO95445 188 aa4.92□□□□□ -1.62
USP48-207ENST00000471752 SPAG11BQ08648 103 aa4.92□□□□□ -1.62
USP48-207ENST00000471752 C2orf82Q6UX34 121 aa4.92□□□□□ -1.62
USP48-207ENST00000471752 Q6ZRP5 223 aa4.92□□□□□ -1.62
USP48-207ENST00000471752 C2orf48Q96LS8 159 aa4.92□□□□□ -1.62
USP48-207ENST00000471752 KIR2DL4Q99706 377 aa4.92□□□□□ -1.62
USP48-207ENST00000471752 C20orf78Q9BR46 151 aa4.92□□□□□ -1.62
USP48-207ENST00000471752 TIMM21Q9BVV7 248 aa4.92□□□□□ -1.62
USP48-207ENST00000471752 SMIM2Q9BVW6 85 aa4.92□□□□□ -1.62
USP48-207ENST00000471752 C6orf48Q9UBA6 75 aa4.92□□□□□ -1.62
USP48-207ENST00000471752 LOC389332A0A1B0GUA5 103 aa4.91□□□□□ -1.62
USP48-207ENST00000471752 RPL32P62910 135 aaKnown RBP4.91□□□□□ -1.62
USP48-207ENST00000471752 C1orf137Q5JT78 98 aa4.91□□□□□ -1.62
USP48-207ENST00000471752 PRR26Q8N8Z3 221 aa4.91□□□□□ -1.62
USP48-207ENST00000471752 ORAOV1Q8WV07 137 aa4.91□□□□□ -1.62
USP48-207ENST00000471752 LINC00474Q9P2X8 69 aa4.91□□□□□ -1.62
USP48-207ENST00000471752 IGLV4-3A0A075B6K6 122 aa4.9□□□□□ -1.63
USP48-207ENST00000471752 LINC00862A6NCI5 91 aa4.9□□□□□ -1.63
USP48-207ENST00000471752 HBBP68871 147 aa4.9□□□□□ -1.63
USP48-207ENST00000471752 PEA15Q15121 130 aa4.9□□□□□ -1.63
USP48-207ENST00000471752 GAGE2EQ4V326 116 aa4.9□□□□□ -1.63
USP48-207ENST00000471752 LINC00242Q5T6M2 205 aa4.9□□□□□ -1.63
USP48-207ENST00000471752 TMEM136Q6ZRR5 245 aa4.9□□□□□ -1.63
USP48-207ENST00000471752 LINC00173Q6ZV60 143 aa4.9□□□□□ -1.63
USP48-207ENST00000471752 GAGE2DQ9UEU5 116 aa4.9□□□□□ -1.63
USP48-207ENST00000471752 IFITM10A6NMD0 228 aa4.89□□□□□ -1.63
USP48-207ENST00000471752 PPP1R2P9O14990 202 aa4.89□□□□□ -1.63
USP48-207ENST00000471752 PPP1R17O96001 155 aa4.89□□□□□ -1.63
USP48-207ENST00000471752 MT-ND6P03923 174 aa4.89□□□□□ -1.63
USP48-207ENST00000471752 MRPS36P82909 103 aaKnown RBP4.89□□□□□ -1.63
USP48-207ENST00000471752 C9orf129Q5T035 196 aaKnown RBP4.89□□□□□ -1.63
USP48-207ENST00000471752 FAM19A5Q7Z5A7 132 aaPredicted RBP4.89□□□□□ -1.63
USP48-207ENST00000471752 PRELID3AQ96N28 172 aa4.89□□□□□ -1.63
USP48-207ENST00000471752 A0A087WZ39 114 aa4.88□□□□□ -1.63
USP48-207ENST00000471752 RNF151Q2KHN1 245 aa4.88□□□□□ -1.63
USP48-207ENST00000471752 REG3GQ6UW15 175 aa4.88□□□□□ -1.63
USP48-207ENST00000471752 OR10D4PQ8NGN7 298 aa4.88□□□□□ -1.63
USP48-207ENST00000471752 SPANXA1Q9NS26 97 aa4.88□□□□□ -1.63
USP48-207ENST00000471752 MRPL35Q9NZE8 188 aaKnown RBP4.88□□□□□ -1.63
USP48-207ENST00000471752 A0A1B0GW15 77 aa4.87□□□□□ -1.63
USP48-207ENST00000471752 IGLV7-43P04211 117 aa4.87□□□□□ -1.63
USP48-207ENST00000471752 KRTAP1-4P0C5Y4 121 aa4.87□□□□□ -1.63
USP48-207ENST00000471752 UBE2D1P51668 147 aa4.87□□□□□ -1.63
USP48-207ENST00000471752 ORMDL3Q8N138 153 aa4.87□□□□□ -1.63
USP48-207ENST00000471752 LINC00469Q8N7U9 141 aa4.87□□□□□ -1.63
USP48-207ENST00000471752 PRSS47A8MTI9 375 aa4.86□□□□□ -1.63
USP48-207ENST00000471752 NDUFA1O15239 70 aa4.86□□□□□ -1.63
USP48-207ENST00000471752 KIAA1644Q3SXP7 199 aa4.86□□□□□ -1.63
USP48-207ENST00000471752 TMEM18Q96B42 140 aa4.86□□□□□ -1.63
USP48-207ENST00000471752 SMDT1Q9H4I9 107 aa4.86□□□□□ -1.63
USP48-207ENST00000471752 IGIPA6NJ69 53 aa4.85□□□□□ -1.63
USP48-207ENST00000471752 F8W036 122 aa4.85□□□□□ -1.63
USP48-207ENST00000471752 TLX1NBP0CAT3 122 aa4.85□□□□□ -1.63
USP48-207ENST00000471752 IFI27P40305 119 aaPredicted RBP4.85□□□□□ -1.63
USP48-207ENST00000471752 C2orf66Q6UXQ4 117 aa4.85□□□□□ -1.63
USP48-207ENST00000471752 Q8N8P6 123 aa4.85□□□□□ -1.63
USP48-207ENST00000471752 AMELXQ99217 191 aa4.85□□□□□ -1.63
USP48-207ENST00000471752 PYGO1Q9Y3Y4 419 aa4.85□□□□□ -1.63
USP48-207ENST00000471752 PPBPP02775 128 aa4.84□□□□□ -1.63
USP48-207ENST00000471752 ADCYAP1P18509 176 aa4.84□□□□□ -1.63
USP48-207ENST00000471752 RAB5AP20339 215 aa4.84□□□□□ -1.63
USP48-207ENST00000471752 SMAGPQ0VAQ4 97 aa4.84□□□□□ -1.63
USP48-207ENST00000471752 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.63
USP48-207ENST00000471752 TMEM141Q96I45 108 aa4.84□□□□□ -1.63
USP48-207ENST00000471752 IMMP2LQ96T52 175 aa4.84□□□□□ -1.63
USP48-207ENST00000471752 XAGE1AQ9HD64 81 aa4.84□□□□□ -1.63
USP48-207ENST00000471752 TGIF2-C20orf24A0A0A6YYL0 155 aa4.83□□□□□ -1.64
USP48-207ENST00000471752 H0Y9J4 135 aa4.83□□□□□ -1.64
USP48-207ENST00000471752 M0QXV9 152 aa4.83□□□□□ -1.64
USP48-207ENST00000471752 S100A8P05109 93 aa4.83□□□□□ -1.64
USP48-207ENST00000471752 ATP5L2Q7Z4Y8 100 aa4.83□□□□□ -1.64
USP48-207ENST00000471752 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms