RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 C11orf86A6NJI1 115 aa12.79□□□□□ -0.36
PSPC1-203ENST00000471658 F8VRH5 84 aa12.79□□□□□ -0.36
PSPC1-203ENST00000471658 IGLC3P0DOY3 106 aa12.79□□□□□ -0.36
PSPC1-203ENST00000471658 LINC01545Q5VT33 79 aa12.79□□□□□ -0.36
PSPC1-203ENST00000471658 TINCRA0A1B0GVN0 87 aa12.78□□□□□ -0.36
PSPC1-203ENST00000471658 FOXI1Q12951 378 aa12.78□□□□□ -0.36
PSPC1-203ENST00000471658 C5orf38Q86SI9 138 aa12.77□□□□□ -0.36
PSPC1-203ENST00000471658 MAPKAPK5-AS1Q8N8E1 139 aa12.77□□□□□ -0.36
PSPC1-203ENST00000471658 CHAC1Q9BUX1 264 aa12.77□□□□□ -0.36
PSPC1-203ENST00000471658 IGHV3OR16-9A0A0B4J2B5 98 aa12.77□□□□□ -0.37
PSPC1-203ENST00000471658 CD164L2Q6UWJ8 174 aa12.77□□□□□ -0.37
PSPC1-203ENST00000471658 NFE4Q86UQ8 179 aa12.77□□□□□ -0.37
PSPC1-203ENST00000471658 GEMIN7Q9H840 131 aaKnown RBP12.77□□□□□ -0.37
PSPC1-203ENST00000471658 CDKN2A-AS1Q9UH64 79 aa12.77□□□□□ -0.37
PSPC1-203ENST00000471658 Q6ZRN7 208 aaPredicted RBP12.76□□□□□ -0.37
PSPC1-203ENST00000471658 C6orf223Q8N319 242 aa12.76□□□□□ -0.37
PSPC1-203ENST00000471658 HERVK_113P63121 156 aa12.75□□□□□ -0.37
PSPC1-203ENST00000471658 RMI2Q96E14 147 aa12.75□□□□□ -0.37
PSPC1-203ENST00000471658 LOC105371267A0A1B0GV96 52 aa12.74□□□□□ -0.37
PSPC1-203ENST00000471658 DPM2O94777 84 aa12.74□□□□□ -0.37
PSPC1-203ENST00000471658 ZNF22P17026 224 aaPredicted RBP12.74□□□□□ -0.37
PSPC1-203ENST00000471658 SEC11AP67812 179 aa12.74□□□□□ -0.37
PSPC1-203ENST00000471658 LINC00469Q8N7U9 141 aa12.74□□□□□ -0.37
PSPC1-203ENST00000471658 IGKCP01834 107 aa12.73□□□□□ -0.37
PSPC1-203ENST00000471658 AKR1D1P51857 326 aa12.73□□□□□ -0.37
PSPC1-203ENST00000471658 C1orf134Q5TEV5 83 aa12.73□□□□□ -0.37
PSPC1-203ENST00000471658 ATOH7Q8N100 152 aa12.73□□□□□ -0.37
PSPC1-203ENST00000471658 SCGB1D1O95968 90 aa12.73□□□□□ -0.37
PSPC1-203ENST00000471658 TMEM170BQ5T4T1 132 aa12.73□□□□□ -0.37
PSPC1-203ENST00000471658 TM2D2Q9BX73 214 aa12.73□□□□□ -0.37
PSPC1-203ENST00000471658 DNAH17Q9UFH2 4485 aa12.72□□□□□ -0.37
PSPC1-203ENST00000471658 IGLV5-45A0A087WSX0 123 aa12.72□□□□□ -0.37
PSPC1-203ENST00000471658 C20orf202A1L168 122 aa12.72□□□□□ -0.37
PSPC1-203ENST00000471658 COX7A2LO14548 114 aa12.72□□□□□ -0.37
PSPC1-203ENST00000471658 PLNP26678 52 aa12.71□□□□□ -0.37
PSPC1-203ENST00000471658 PSCAO43653 123 aa12.7□□□□□ -0.38
PSPC1-203ENST00000471658 COX11Q9Y6N1 276 aa12.7□□□□□ -0.38
PSPC1-203ENST00000471658 A0A087WZ39 114 aa12.7□□□□□ -0.38
PSPC1-203ENST00000471658 LECT2O14960 151 aa12.7□□□□□ -0.38
PSPC1-203ENST00000471658 SPINK8P0C7L1 97 aa12.7□□□□□ -0.38
PSPC1-203ENST00000471658 WFDC2Q14508 124 aa12.7□□□□□ -0.38
PSPC1-203ENST00000471658 JOSD1Q15040 202 aaPredicted RBP12.7□□□□□ -0.38
PSPC1-203ENST00000471658 PYY3Q5JQD4 70 aa12.69□□□□□ -0.38
PSPC1-203ENST00000471658 IGHV3-64A0A075B6Q5 118 aa12.68□□□□□ -0.38
PSPC1-203ENST00000471658 MALP21145 153 aa12.68□□□□□ -0.38
PSPC1-203ENST00000471658 RYR3Q15413 4870 aa12.68□□□□□ -0.38
PSPC1-203ENST00000471658 RTL8CO15255 209 aa12.67□□□□□ -0.38
PSPC1-203ENST00000471658 STPG4Q8N801 248 aa12.67□□□□□ -0.38
PSPC1-203ENST00000471658 TMEM223A0PJW6 202 aa12.66□□□□□ -0.38
PSPC1-203ENST00000471658 SMIM1B2RUZ4 78 aa12.66□□□□□ -0.38
PSPC1-203ENST00000471658 MAJINQ3KP22 176 aa12.66□□□□□ -0.38
PSPC1-203ENST00000471658 USP17L23D6RBM5 183 aa12.66□□□□□ -0.38
PSPC1-203ENST00000471658 H3BRM9 83 aa12.66□□□□□ -0.38
PSPC1-203ENST00000471658 C15orf56Q8N910 161 aa12.66□□□□□ -0.38
PSPC1-203ENST00000471658 FRAS1Q86XX4 4008 aa12.65□□□□□ -0.38
PSPC1-203ENST00000471658 hDV102S1A0JD36 115 aa12.65□□□□□ -0.38
PSPC1-203ENST00000471658 LRCOL1A6NCL2 159 aa12.65□□□□□ -0.38
PSPC1-203ENST00000471658 CDPF1Q6NVV7 123 aa12.65□□□□□ -0.38
PSPC1-203ENST00000471658 HIGD2BQ4VC39 106 aa12.64□□□□□ -0.39
PSPC1-203ENST00000471658 LINC00526Q96FQ7 95 aa12.64□□□□□ -0.39
PSPC1-203ENST00000471658 LINC01561Q8N1V8 128 aa12.63□□□□□ -0.39
PSPC1-203ENST00000471658 ORAOV1Q8WV07 137 aa12.63□□□□□ -0.39
PSPC1-203ENST00000471658 IGHV1-58A0A0C4DH39 117 aa12.62□□□□□ -0.39
PSPC1-203ENST00000471658 TNP2Q05952 138 aa12.62□□□□□ -0.39
PSPC1-203ENST00000471658 TOMM7Q9P0U1 55 aa12.62□□□□□ -0.39
PSPC1-203ENST00000471658 IGLV5-39A0A0G2JS06 123 aa12.61□□□□□ -0.39
PSPC1-203ENST00000471658 APOMO95445 188 aa12.61□□□□□ -0.39
PSPC1-203ENST00000471658 ANKRD39Q53RE8 183 aa12.61□□□□□ -0.39
PSPC1-203ENST00000471658 FAT2Q9NYQ8 4349 aa12.6□□□□□ -0.39
PSPC1-203ENST00000471658 KIAA0087Q14695 138 aa12.6□□□□□ -0.39
PSPC1-203ENST00000471658 CFAP161Q6P656 301 aa12.6□□□□□ -0.39
PSPC1-203ENST00000471658 A0A087WTM6 91 aa12.59□□□□□ -0.39
PSPC1-203ENST00000471658 IGKV2D-26A0A0A0MRZ7 120 aa12.59□□□□□ -0.39
PSPC1-203ENST00000471658 SPAG11BQ08648 103 aa12.59□□□□□ -0.39
PSPC1-203ENST00000471658 DNAH11Q96DT5 4516 aa12.58□□□□□ -0.4
PSPC1-203ENST00000471658 TSPEAR-AS2P59090 65 aa12.58□□□□□ -0.4
PSPC1-203ENST00000471658 HERVK_113P61574 105 aa12.58□□□□□ -0.4
PSPC1-203ENST00000471658 COX7B2Q8TF08 81 aa12.58□□□□□ -0.4
PSPC1-203ENST00000471658 GVQW2A0A096LPI5 108 aaPredicted RBP12.57□□□□□ -0.4
PSPC1-203ENST00000471658 E9PLD3 99 aa12.57□□□□□ -0.4
PSPC1-203ENST00000471658 LEPROTO15243 131 aa12.56□□□□□ -0.4
PSPC1-203ENST00000471658 ZNF561-AS1K7EIQ3 104 aa12.55□□□□□ -0.4
PSPC1-203ENST00000471658 SLPIP03973 132 aa12.55□□□□□ -0.4
PSPC1-203ENST00000471658 C2orf82Q6UX34 121 aa12.55□□□□□ -0.4
PSPC1-203ENST00000471658 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.55□□□□□ -0.4
PSPC1-203ENST00000471658 PRSS2P07478 247 aa12.55□□□□□ -0.4
PSPC1-203ENST00000471658 C6orf226Q5I0X4 101 aa12.55□□□□□ -0.4
PSPC1-203ENST00000471658 Q8IZM0 81 aa12.55□□□□□ -0.4
PSPC1-203ENST00000471658 NTN5Q8WTR8 489 aaPredicted RBP12.55□□□□□ -0.4
PSPC1-203ENST00000471658 TTTY13Q9BZ97 58 aa12.55□□□□□ -0.4
PSPC1-203ENST00000471658 HSBP1L1C9JCN9 74 aa12.54□□□□□ -0.4
PSPC1-203ENST00000471658 FUSP35637 526 aaKnown RBP eCLIP12.54□□□□□ -0.4
PSPC1-203ENST00000471658 Q8N814 137 aa12.54□□□□□ -0.4
PSPC1-203ENST00000471658 PAM16Q9Y3D7 125 aa12.54□□□□□ -0.4
PSPC1-203ENST00000471658 J3QQQ9 107 aa12.53□□□□□ -0.4
PSPC1-203ENST00000471658 NMUP48645 174 aa12.52□□□□□ -0.4
PSPC1-203ENST00000471658 C10orf25Q5T742 122 aa12.52□□□□□ -0.4
PSPC1-203ENST00000471658 UNQ6190/PRO20217Q6UXQ8 127 aa12.52□□□□□ -0.4
PSPC1-203ENST00000471658 PLEKHB2Q96CS7 222 aa12.52□□□□□ -0.4
PSPC1-203ENST00000471658 VAMP8Q9BV40 100 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms