RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 FAM231DQ6ZW35 169 aa5.57□□□□□ -1.52
CPSF4-211ENST00000471455 OCC1Q8TAD7 63 aa5.57□□□□□ -1.52
CPSF4-211ENST00000471455 TMEM18Q96B42 140 aa5.57□□□□□ -1.52
CPSF4-211ENST00000471455 IMMP2LQ96T52 175 aa5.57□□□□□ -1.52
CPSF4-211ENST00000471455 KIR2DL4Q99706 377 aa5.57□□□□□ -1.52
CPSF4-211ENST00000471455 A0A1B0GUT8 65 aa5.56□□□□□ -1.52
CPSF4-211ENST00000471455 TMEM250H0YL14 139 aa5.56□□□□□ -1.52
CPSF4-211ENST00000471455 IGLV7-43P04211 117 aa5.56□□□□□ -1.52
CPSF4-211ENST00000471455 OR10D4PQ8NGN7 298 aa5.56□□□□□ -1.52
CPSF4-211ENST00000471455 TMEM191AQ9H0A3 160 aa5.56□□□□□ -1.52
CPSF4-211ENST00000471455 A0A087WZ39 114 aa5.55□□□□□ -1.52
CPSF4-211ENST00000471455 TRAV13-1A0A0B4J241 112 aa5.55□□□□□ -1.52
CPSF4-211ENST00000471455 H0Y9J4 135 aa5.55□□□□□ -1.52
CPSF4-211ENST00000471455 PPP1R2P9O14990 202 aa5.55□□□□□ -1.52
CPSF4-211ENST00000471455 NDUFA1O15239 70 aa5.55□□□□□ -1.52
CPSF4-211ENST00000471455 TCAPO15273 167 aa5.55□□□□□ -1.52
CPSF4-211ENST00000471455 RPL13AP40429 203 aaKnown RBP5.55□□□□□ -1.52
CPSF4-211ENST00000471455 UBE2D1P51668 147 aa5.55□□□□□ -1.52
CPSF4-211ENST00000471455 POLR2KP53803 58 aaKnown RBP5.55□□□□□ -1.52
CPSF4-211ENST00000471455 PHF5AQ7RTV0 110 aaKnown RBP5.55□□□□□ -1.52
CPSF4-211ENST00000471455 PRR26Q8N8Z3 221 aa5.55□□□□□ -1.52
CPSF4-211ENST00000471455 MRPL35Q9NZE8 188 aaKnown RBP5.55□□□□□ -1.52
CPSF4-211ENST00000471455 C5orf38Q86SI9 138 aa5.54□□□□□ -1.52
CPSF4-211ENST00000471455 SLC51BQ86UW2 128 aa5.54□□□□□ -1.52
CPSF4-211ENST00000471455 TIMM21Q9BVV7 248 aa5.54□□□□□ -1.52
CPSF4-211ENST00000471455 UBE2D4Q9Y2X8 147 aa5.54□□□□□ -1.52
CPSF4-211ENST00000471455 HIGD1CA8MV81 97 aa5.53□□□□□ -1.52
CPSF4-211ENST00000471455 RAB4AP20338 218 aa5.53□□□□□ -1.52
CPSF4-211ENST00000471455 SUMO2P61956 95 aaKnown RBP5.53□□□□□ -1.52
CPSF4-211ENST00000471455 BLOC1S1P78537 153 aa5.53□□□□□ -1.52
CPSF4-211ENST00000471455 RIGQ13278 110 aa5.53□□□□□ -1.52
CPSF4-211ENST00000471455 TMEM241Q24JQ0 296 aa5.53□□□□□ -1.52
CPSF4-211ENST00000471455 ORAOV1Q8WV07 137 aa5.53□□□□□ -1.52
CPSF4-211ENST00000471455 OPRPNQ99935 248 aaPredicted RBP5.53□□□□□ -1.52
CPSF4-211ENST00000471455 TLX1NBP0CAT3 122 aa5.52□□□□□ -1.53
CPSF4-211ENST00000471455 UBE2BP63146 152 aa5.52□□□□□ -1.53
CPSF4-211ENST00000471455 PRR4Q16378 134 aa5.52□□□□□ -1.53
CPSF4-211ENST00000471455 RNASE13Q5GAN3 156 aaKnown RBP5.52□□□□□ -1.53
CPSF4-211ENST00000471455 Q6ZUT4 128 aa5.52□□□□□ -1.53
CPSF4-211ENST00000471455 AMN1Q8IY45 258 aa5.52□□□□□ -1.53
CPSF4-211ENST00000471455 CEBPGP53567 150 aa5.51□□□□□ -1.53
CPSF4-211ENST00000471455 FAM19A5Q7Z5A7 132 aaPredicted RBP5.51□□□□□ -1.53
CPSF4-211ENST00000471455 SPANXA1Q9NS26 97 aa5.51□□□□□ -1.53
CPSF4-211ENST00000471455 LPAP08519 4548 aa5.5□□□□□ -1.53
CPSF4-211ENST00000471455 TGIF2-C20orf24A0A0A6YYL0 155 aa5.5□□□□□ -1.53
CPSF4-211ENST00000471455 M0QXV9 152 aa5.5□□□□□ -1.53
CPSF4-211ENST00000471455 HBBP68871 147 aa5.5□□□□□ -1.53
CPSF4-211ENST00000471455 NRACQ8N912 160 aa5.5□□□□□ -1.53
CPSF4-211ENST00000471455 SMIM7Q9BQ49 75 aa5.5□□□□□ -1.53
CPSF4-211ENST00000471455 C20orf78Q9BR46 151 aa5.5□□□□□ -1.53
CPSF4-211ENST00000471455 SMDT1Q9H4I9 107 aa5.5□□□□□ -1.53
CPSF4-211ENST00000471455 OSTCQ9NRP0 149 aa5.5□□□□□ -1.53
CPSF4-211ENST00000471455 CARHSP1Q9Y2V2 147 aaKnown RBP5.5□□□□□ -1.53
CPSF4-211ENST00000471455 LINC00862A6NCI5 91 aa5.49□□□□□ -1.53
CPSF4-211ENST00000471455 IFITM10A6NMD0 228 aa5.49□□□□□ -1.53
CPSF4-211ENST00000471455 SMKR1H3BMG3 65 aa5.49□□□□□ -1.53
CPSF4-211ENST00000471455 RPL32P62910 135 aaKnown RBP5.49□□□□□ -1.53
CPSF4-211ENST00000471455 GAGE2EQ4V326 116 aa5.49□□□□□ -1.53
CPSF4-211ENST00000471455 LINC01551Q86U37 167 aa5.49□□□□□ -1.53
CPSF4-211ENST00000471455 GAGE2DQ9UEU5 116 aa5.49□□□□□ -1.53
CPSF4-211ENST00000471455 NAT8BQ9UHF3 227 aa5.49□□□□□ -1.53
CPSF4-211ENST00000471455 IGHV3OR16-9A0A0B4J2B5 98 aa5.48□□□□□ -1.53
CPSF4-211ENST00000471455 TRBV30A0A0K0K1B3 111 aa5.48□□□□□ -1.53
CPSF4-211ENST00000471455 A0A1B0GW15 77 aa5.48□□□□□ -1.53
CPSF4-211ENST00000471455 FAM168BA1KXE4 195 aa5.48□□□□□ -1.53
CPSF4-211ENST00000471455 ZNF727A8MUV8 499 aa5.48□□□□□ -1.53
CPSF4-211ENST00000471455 MRPS36P82909 103 aaKnown RBP5.48□□□□□ -1.53
CPSF4-211ENST00000471455 TCTE3Q8IZS6 198 aa5.48□□□□□ -1.53
CPSF4-211ENST00000471455 PACRGQ96M98 296 aaPredicted RBP5.48□□□□□ -1.53
CPSF4-211ENST00000471455 C6orf48Q9UBA6 75 aa5.48□□□□□ -1.53
CPSF4-211ENST00000471455 S100A8P05109 93 aa5.47□□□□□ -1.53
CPSF4-211ENST00000471455 KRTAP1-4P0C5Y4 121 aa5.47□□□□□ -1.53
CPSF4-211ENST00000471455 CKS2P33552 79 aa5.47□□□□□ -1.53
CPSF4-211ENST00000471455 FAM104BQ5XKR9 115 aa5.47□□□□□ -1.53
CPSF4-211ENST00000471455 UNQ6190/PRO20217Q6UXQ8 127 aa5.47□□□□□ -1.53
CPSF4-211ENST00000471455 EIF5A2Q9GZV4 153 aaKnown RBP5.47□□□□□ -1.53
CPSF4-211ENST00000471455 TRBV24-1A0A075B6N3 115 aa5.46□□□□□ -1.54
CPSF4-211ENST00000471455 NDUFC2-KCTD14E9PQ53 114 aa5.46□□□□□ -1.54
CPSF4-211ENST00000471455 NUPR1O60356 82 aa5.46□□□□□ -1.54
CPSF4-211ENST00000471455 IFI27P40305 119 aaPredicted RBP5.46□□□□□ -1.54
CPSF4-211ENST00000471455 MRPL51Q4U2R6 128 aaKnown RBP5.46□□□□□ -1.54
CPSF4-211ENST00000471455 C10orf25Q5T742 122 aa5.46□□□□□ -1.54
CPSF4-211ENST00000471455 SMIM2Q9BVW6 85 aa5.46□□□□□ -1.54
CPSF4-211ENST00000471455 F8W036 122 aa5.45□□□□□ -1.54
CPSF4-211ENST00000471455 ZNF861PO60384 105 aa5.45□□□□□ -1.54
CPSF4-211ENST00000471455 RAB5AP20339 215 aa5.45□□□□□ -1.54
CPSF4-211ENST00000471455 RPL39P62891 51 aaKnown RBP5.45□□□□□ -1.54
CPSF4-211ENST00000471455 LBHQ53QV2 105 aaPredicted RBP5.45□□□□□ -1.54
CPSF4-211ENST00000471455 KRTAP11-1Q8IUC1 163 aa5.45□□□□□ -1.54
CPSF4-211ENST00000471455 V9GYV3 84 aa5.45□□□□□ -1.54
CPSF4-211ENST00000471455 TNFRSF6BO95407 300 aa5.44□□□□□ -1.54
CPSF4-211ENST00000471455 PPBPP02775 128 aa5.44□□□□□ -1.54
CPSF4-211ENST00000471455 PRSS2P07478 247 aa5.44□□□□□ -1.54
CPSF4-211ENST00000471455 FAM74A3Q4VXF1 159 aa5.44□□□□□ -1.54
CPSF4-211ENST00000471455 ALKAL2Q6UX46 152 aa5.44□□□□□ -1.54
CPSF4-211ENST00000471455 LINC01561Q8N1V8 128 aa5.44□□□□□ -1.54
CPSF4-211ENST00000471455 C2orf88Q9BSF0 95 aa5.44□□□□□ -1.54
CPSF4-211ENST00000471455 MUC2Q02817 5179 aa5.43□□□□□ -1.54
CPSF4-211ENST00000471455 RPL28P46779 137 aaKnown RBP5.43□□□□□ -1.54
CPSF4-211ENST00000471455 CKS1BP61024 79 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms