RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 A0A087WYN8 130 aa10.42□□□□□ -0.74
GTF3C2-209ENST00000470115 COX6A2Q02221 97 aa10.42□□□□□ -0.74
GTF3C2-209ENST00000470115 SPACA4Q8TDM5 124 aa10.42□□□□□ -0.74
GTF3C2-209ENST00000470115 RPL39P62891 51 aaKnown RBP10.41□□□□□ -0.74
GTF3C2-209ENST00000470115 ORMDL2Q53FV1 153 aa10.41□□□□□ -0.74
GTF3C2-209ENST00000470115 RNASE13Q5GAN3 156 aaKnown RBP10.41□□□□□ -0.74
GTF3C2-209ENST00000470115 CD164L2Q6UWJ8 174 aa10.41□□□□□ -0.74
GTF3C2-209ENST00000470115 FA2HQ7L5A8 372 aa10.41□□□□□ -0.74
GTF3C2-209ENST00000470115 LINC00526Q96FQ7 95 aa10.41□□□□□ -0.74
GTF3C2-209ENST00000470115 UBE2D4Q9Y2X8 147 aa10.41□□□□□ -0.74
GTF3C2-209ENST00000470115 IGHV1-58A0A0C4DH39 117 aa10.4□□□□□ -0.74
GTF3C2-209ENST00000470115 COLCA2A8K830 154 aa10.4□□□□□ -0.74
GTF3C2-209ENST00000470115 HNRNPA3P51991 378 aaKnown RBP10.4□□□□□ -0.74
GTF3C2-209ENST00000470115 CSDC2Q9Y534 153 aaKnown RBP10.4□□□□□ -0.74
GTF3C2-209ENST00000470115 C1orf196B1AJZ1 125 aa10.39□□□□□ -0.75
GTF3C2-209ENST00000470115 TRGC2P03986 189 aa10.39□□□□□ -0.75
GTF3C2-209ENST00000470115 IGKV2-24A0A0C4DH68 120 aa10.38□□□□□ -0.75
GTF3C2-209ENST00000470115 K7EMI3 77 aa10.38□□□□□ -0.75
GTF3C2-209ENST00000470115 MAJINQ3KP22 176 aa10.38□□□□□ -0.75
GTF3C2-209ENST00000470115 C18orf32Q8TCD1 76 aa10.38□□□□□ -0.75
GTF3C2-209ENST00000470115 TIMM21Q9BVV7 248 aa10.38□□□□□ -0.75
GTF3C2-209ENST00000470115 PLAC8Q9NZF1 115 aa10.38□□□□□ -0.75
GTF3C2-209ENST00000470115 TRAV13-1A0A0B4J241 112 aa10.37□□□□□ -0.75
GTF3C2-209ENST00000470115 Q6ZUT4 128 aa10.37□□□□□ -0.75
GTF3C2-209ENST00000470115 CYSLTR1Q9Y271 337 aa10.37□□□□□ -0.75
GTF3C2-209ENST00000470115 ZNF561-AS1K7EIQ3 104 aa10.36□□□□□ -0.75
GTF3C2-209ENST00000470115 OXTP01178 125 aa10.36□□□□□ -0.75
GTF3C2-209ENST00000470115 G0S2P27469 103 aa10.36□□□□□ -0.75
GTF3C2-209ENST00000470115 C2orf66Q6UXQ4 117 aa10.36□□□□□ -0.75
GTF3C2-209ENST00000470115 SPANXA1Q9NS26 97 aa10.36□□□□□ -0.75
GTF3C2-209ENST00000470115 A0A096LNI7 61 aa10.35□□□□□ -0.75
GTF3C2-209ENST00000470115 COX7A2LO14548 114 aa10.35□□□□□ -0.75
GTF3C2-209ENST00000470115 MALP21145 153 aa10.35□□□□□ -0.75
GTF3C2-209ENST00000470115 CARD19Q96LW7 228 aa10.35□□□□□ -0.75
GTF3C2-209ENST00000470115 RAB5BP61020 215 aa10.34□□□□□ -0.75
GTF3C2-209ENST00000470115 SYCNQ0VAF6 134 aa10.34□□□□□ -0.75
GTF3C2-209ENST00000470115 STPG4Q8N801 248 aa10.34□□□□□ -0.75
GTF3C2-209ENST00000470115 FAM104AQ969W3 186 aa10.34□□□□□ -0.75
GTF3C2-209ENST00000470115 OPRPNQ99935 248 aaPredicted RBP10.34□□□□□ -0.75
GTF3C2-209ENST00000470115 LINC00614P0C842 121 aa10.33□□□□□ -0.76
GTF3C2-209ENST00000470115 C5orf38Q86SI9 138 aa10.33□□□□□ -0.76
GTF3C2-209ENST00000470115 BAGE3Q86Y29 109 aa10.33□□□□□ -0.76
GTF3C2-209ENST00000470115 IGLV4-69A0A075B6H9 119 aa10.32□□□□□ -0.76
GTF3C2-209ENST00000470115 Q6ZN92 141 aa10.31□□□□□ -0.76
GTF3C2-209ENST00000470115 C7orf33Q8WU49 177 aa10.31□□□□□ -0.76
GTF3C2-209ENST00000470115 LINC01546A6NGU7 62 aa10.3□□□□□ -0.76
GTF3C2-209ENST00000470115 PMCHL1Q16048 86 aa10.3□□□□□ -0.76
GTF3C2-209ENST00000470115 Q6ZRU5 148 aa10.3□□□□□ -0.76
GTF3C2-209ENST00000470115 TOMM6Q96B49 74 aa10.3□□□□□ -0.76
GTF3C2-209ENST00000470115 URB1-AS1Q96HZ7 61 aa10.3□□□□□ -0.76
GTF3C2-209ENST00000470115 TMEM141Q96I45 108 aa10.3□□□□□ -0.76
GTF3C2-209ENST00000470115 SCGB3A1Q96QR1 104 aa10.3□□□□□ -0.76
GTF3C2-209ENST00000470115 LINC00474Q9P2X8 69 aa10.3□□□□□ -0.76
GTF3C2-209ENST00000470115 PKIGQ9Y2B9 76 aa10.3□□□□□ -0.76
GTF3C2-209ENST00000470115 PYGO1Q9Y3Y4 419 aa10.3□□□□□ -0.76
GTF3C2-209ENST00000470115 IGLV4-3A0A075B6K6 122 aa10.29□□□□□ -0.76
GTF3C2-209ENST00000470115 IFITM10A6NMD0 228 aa10.29□□□□□ -0.76
GTF3C2-209ENST00000470115 MRPS36P82909 103 aaKnown RBP10.29□□□□□ -0.76
GTF3C2-209ENST00000470115 APOMO95445 188 aa10.28□□□□□ -0.76
GTF3C2-209ENST00000470115 HBDP02042 147 aa10.28□□□□□ -0.76
GTF3C2-209ENST00000470115 TEX43Q6ZNM6 134 aa10.28□□□□□ -0.76
GTF3C2-209ENST00000470115 C2orf48Q96LS8 159 aa10.28□□□□□ -0.76
GTF3C2-209ENST00000470115 CAMK2N2Q96S95 79 aa10.28□□□□□ -0.76
GTF3C2-209ENST00000470115 C2orf88Q9BSF0 95 aa10.28□□□□□ -0.76
GTF3C2-209ENST00000470115 VCX2Q9H322 139 aa10.28□□□□□ -0.76
GTF3C2-209ENST00000470115 LOC107984640A0A0U1RRK4 108 aa10.27□□□□□ -0.77
GTF3C2-209ENST00000470115 LINC01549A6NIU2 74 aa10.27□□□□□ -0.77
GTF3C2-209ENST00000470115 HSBP1O75506 76 aa10.27□□□□□ -0.77
GTF3C2-209ENST00000470115 PAPPA-AS1Q5QFB9 102 aa10.27□□□□□ -0.77
GTF3C2-209ENST00000470115 ERASQ7Z444 233 aa10.27□□□□□ -0.77
GTF3C2-209ENST00000470115 CHCHD1Q96BP2 118 aaKnown RBP10.27□□□□□ -0.77
GTF3C2-209ENST00000470115 IGHV3OR16-9A0A0B4J2B5 98 aa10.26□□□□□ -0.77
GTF3C2-209ENST00000470115 IGIPA6NJ69 53 aa10.26□□□□□ -0.77
GTF3C2-209ENST00000470115 PTTG1IPP53801 180 aa10.26□□□□□ -0.77
GTF3C2-209ENST00000470115 SPAG11BQ08648 103 aa10.26□□□□□ -0.77
GTF3C2-209ENST00000470115 GAGE2BQ13066 116 aa10.26□□□□□ -0.77
GTF3C2-209ENST00000470115 ZC2HC1BQ5TFG8 222 aa10.26□□□□□ -0.77
GTF3C2-209ENST00000470115 TIMM17AQ99595 171 aa10.26□□□□□ -0.77
GTF3C2-209ENST00000470115 OR10D4PQ8NGN7 298 aa10.25□□□□□ -0.77
GTF3C2-209ENST00000470115 A0A0J9YXV3 536 aa10.24□□□□□ -0.77
GTF3C2-209ENST00000470115 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.24□□□□□ -0.77
GTF3C2-209ENST00000470115 SERF1AO75920 110 aa10.24□□□□□ -0.77
GTF3C2-209ENST00000470115 NPSP0C0P6 89 aa10.24□□□□□ -0.77
GTF3C2-209ENST00000470115 PRR3P79522 188 aaKnown RBP10.24□□□□□ -0.77
GTF3C2-209ENST00000470115 ORAOV1Q8WV07 137 aa10.24□□□□□ -0.77
GTF3C2-209ENST00000470115 HMCN2Q8NDA2 5059 aa10.24□□□□□ -0.77
GTF3C2-209ENST00000470115 A0A096LNJ9 63 aa10.23□□□□□ -0.77
GTF3C2-209ENST00000470115 HIST1H2BKO60814 126 aa10.23□□□□□ -0.77
GTF3C2-209ENST00000470115 HIST1H2BJP06899 126 aa10.23□□□□□ -0.77
GTF3C2-209ENST00000470115 HIST1H2BOP23527 126 aa10.23□□□□□ -0.77
GTF3C2-209ENST00000470115 HIST1H2BBP33778 126 aa10.23□□□□□ -0.77
GTF3C2-209ENST00000470115 NDUFA6P56556 154 aa10.23□□□□□ -0.77
GTF3C2-209ENST00000470115 HIST1H2BDP58876 126 aa10.23□□□□□ -0.77
GTF3C2-209ENST00000470115 HIST1H2BCP62807 126 aa10.23□□□□□ -0.77
GTF3C2-209ENST00000470115 HIST2H2BEQ16778 126 aa10.23□□□□□ -0.77
GTF3C2-209ENST00000470115 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.23□□□□□ -0.77
GTF3C2-209ENST00000470115 SERTAD4-AS1Q5TG53 156 aa10.23□□□□□ -0.77
GTF3C2-209ENST00000470115 FAM19A2Q8N3H0 131 aa10.23□□□□□ -0.77
GTF3C2-209ENST00000470115 HIST1H2BHQ93079 126 aa10.23□□□□□ -0.77
GTF3C2-209ENST00000470115 HIST1H2BNQ99877 126 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms