RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 A0A1B0GV50 99 aa6.83□□□□□ -1.32
LSM2-209ENST00000470083 MT1HP80294 61 aa6.83□□□□□ -1.32
LSM2-209ENST00000470083 SMAGPQ0VAQ4 97 aa6.83□□□□□ -1.32
LSM2-209ENST00000470083 KRTAP13-3Q3SY46 172 aa6.83□□□□□ -1.32
LSM2-209ENST00000470083 Q5BKY6 102 aa6.83□□□□□ -1.32
LSM2-209ENST00000470083 FP248Q71RG6 208 aaPredicted RBP6.83□□□□□ -1.32
LSM2-209ENST00000470083 MBD3L1Q8WWY6 194 aa6.83□□□□□ -1.32
LSM2-209ENST00000470083 CYTL1Q9NRR1 136 aa6.83□□□□□ -1.32
LSM2-209ENST00000470083 IGHV3OR16-9A0A0B4J2B5 98 aa6.82□□□□□ -1.32
LSM2-209ENST00000470083 POLR2KP53803 58 aaKnown RBP6.82□□□□□ -1.32
LSM2-209ENST00000470083 IFITM3Q01628 133 aa6.82□□□□□ -1.32
LSM2-209ENST00000470083 LBHQ53QV2 105 aaPredicted RBP6.82□□□□□ -1.32
LSM2-209ENST00000470083 Q6ZUT4 128 aa6.82□□□□□ -1.32
LSM2-209ENST00000470083 KCNRGQ8N5I3 272 aa6.82□□□□□ -1.32
LSM2-209ENST00000470083 C22orf24Q9Y442 160 aa6.82□□□□□ -1.32
LSM2-209ENST00000470083 TRBV30A0A0K0K1B3 111 aa6.81□□□□□ -1.32
LSM2-209ENST00000470083 GNG4P50150 75 aa6.81□□□□□ -1.32
LSM2-209ENST00000470083 LINC00299Q6ZSB3 139 aa6.81□□□□□ -1.32
LSM2-209ENST00000470083 S100ZQ8WXG8 99 aa6.81□□□□□ -1.32
LSM2-209ENST00000470083 IGKV2D-26A0A0A0MRZ7 120 aa6.8□□□□□ -1.32
LSM2-209ENST00000470083 CCL20P78556 96 aa6.8□□□□□ -1.32
LSM2-209ENST00000470083 BIN3Q9NQY0 253 aa6.8□□□□□ -1.32
LSM2-209ENST00000470083 FXYD6-FXYD2A0A087WZ82 144 aa6.79□□□□□ -1.32
LSM2-209ENST00000470083 RAB19A4D1S5 217 aa6.79□□□□□ -1.32
LSM2-209ENST00000470083 FCER1GP30273 86 aa6.79□□□□□ -1.32
LSM2-209ENST00000470083 KIAA0087Q14695 138 aa6.79□□□□□ -1.32
LSM2-209ENST00000470083 KRTAP19-2Q3LHN2 52 aa6.79□□□□□ -1.32
LSM2-209ENST00000470083 NUDT10Q8NFP7 164 aa6.79□□□□□ -1.32
LSM2-209ENST00000470083 FAM213BQ8TBF2 198 aa6.79□□□□□ -1.32
LSM2-209ENST00000470083 NUDT11Q96G61 164 aa6.79□□□□□ -1.32
LSM2-209ENST00000470083 PACRGQ96M98 296 aaPredicted RBP6.79□□□□□ -1.32
LSM2-209ENST00000470083 TIMM21Q9BVV7 248 aa6.79□□□□□ -1.32
LSM2-209ENST00000470083 TRBV20OR9-2A0A075B6H5 130 aa6.78□□□□□ -1.32
LSM2-209ENST00000470083 KRTAP10-6P60371 365 aaPredicted RBP6.78□□□□□ -1.32
LSM2-209ENST00000470083 TP73-AS1Q9UF72 201 aa6.78□□□□□ -1.32
LSM2-209ENST00000470083 C2orf82Q6UX34 121 aa6.77□□□□□ -1.33
LSM2-209ENST00000470083 MRPL55Q7Z7F7 128 aaKnown RBP6.77□□□□□ -1.33
LSM2-209ENST00000470083 KRTAP13-1Q8IUC0 172 aa6.77□□□□□ -1.33
LSM2-209ENST00000470083 UMAD1C9J7I0 102 aa6.76□□□□□ -1.33
LSM2-209ENST00000470083 VCYO14598 125 aa6.76□□□□□ -1.33
LSM2-209ENST00000470083 GIPP09681 153 aaPredicted RBP6.76□□□□□ -1.33
LSM2-209ENST00000470083 MANBALQ9NQG1 85 aa6.76□□□□□ -1.33
LSM2-209ENST00000470083 TMEM238LA0A1B0GVL6 79 aa6.75□□□□□ -1.33
LSM2-209ENST00000470083 SPAG11AQ6PDA7 123 aa6.75□□□□□ -1.33
LSM2-209ENST00000470083 GNG13Q9P2W3 67 aa6.75□□□□□ -1.33
LSM2-209ENST00000470083 ZNF727A8MUV8 499 aa6.74□□□□□ -1.33
LSM2-209ENST00000470083 UBE2AP49459 152 aa6.74□□□□□ -1.33
LSM2-209ENST00000470083 LINC00469Q8N7U9 141 aa6.74□□□□□ -1.33
LSM2-209ENST00000470083 FAM104AQ969W3 186 aa6.74□□□□□ -1.33
LSM2-209ENST00000470083 TMEM18Q96B42 140 aa6.74□□□□□ -1.33
LSM2-209ENST00000470083 ANAPC16Q96DE5 110 aa6.74□□□□□ -1.33
LSM2-209ENST00000470083 KIR2DL4Q99706 377 aa6.74□□□□□ -1.33
LSM2-209ENST00000470083 XAGE1AQ9HD64 81 aa6.74□□□□□ -1.33
LSM2-209ENST00000470083 TGIF2-C20orf24A0A0A6YYL0 155 aa6.73□□□□□ -1.33
LSM2-209ENST00000470083 RPL37AP8A6NKH3 93 aa6.72□□□□□ -1.33
LSM2-209ENST00000470083 IFITM10A6NMD0 228 aa6.72□□□□□ -1.33
LSM2-209ENST00000470083 A0A1B0GVG6 124 aa6.71□□□□□ -1.34
LSM2-209ENST00000470083 PDE6DO43924 150 aa6.71□□□□□ -1.34
LSM2-209ENST00000470083 TNFRSF6BO95407 300 aa6.71□□□□□ -1.34
LSM2-209ENST00000470083 RAB4AP20338 218 aa6.71□□□□□ -1.34
LSM2-209ENST00000470083 SUMO2P61956 95 aaKnown RBP6.71□□□□□ -1.34
LSM2-209ENST00000470083 HBBP68871 147 aa6.71□□□□□ -1.34
LSM2-209ENST00000470083 MRPS36P82909 103 aaKnown RBP6.71□□□□□ -1.34
LSM2-209ENST00000470083 C3orf22Q8N5N4 141 aa6.71□□□□□ -1.34
LSM2-209ENST00000470083 LINC00167Q96N53 147 aa6.71□□□□□ -1.34
LSM2-209ENST00000470083 TMEM191AQ9H0A3 160 aa6.71□□□□□ -1.34
LSM2-209ENST00000470083 SPANXA1Q9NS26 97 aa6.71□□□□□ -1.34
LSM2-209ENST00000470083 NDUFA13Q9P0J0 144 aa6.71□□□□□ -1.34
LSM2-209ENST00000470083 SSPOA2VEC9 5147 aa6.71□□□□□ -1.34
LSM2-209ENST00000470083 K7EN84 100 aa6.7□□□□□ -1.34
LSM2-209ENST00000470083 ARPC5O15511 151 aa6.7□□□□□ -1.34
LSM2-209ENST00000470083 PPP1R17O96001 155 aa6.7□□□□□ -1.34
LSM2-209ENST00000470083 RPL39P62891 51 aaKnown RBP6.7□□□□□ -1.34
LSM2-209ENST00000470083 MED9Q9NWA0 146 aa6.7□□□□□ -1.34
LSM2-209ENST00000470083 AMN1Q8IY45 258 aa6.69□□□□□ -1.34
LSM2-209ENST00000470083 NRACQ8N912 160 aa6.69□□□□□ -1.34
LSM2-209ENST00000470083 USH2AO75445 5202 aa6.68□□□□□ -1.34
LSM2-209ENST00000470083 A8MWL6 223 aa6.68□□□□□ -1.34
LSM2-209ENST00000470083 SMKR1H3BMG3 65 aa6.68□□□□□ -1.34
LSM2-209ENST00000470083 C21orf62-AS1Q17RA5 79 aa6.68□□□□□ -1.34
LSM2-209ENST00000470083 BORCS7Q96B45 105 aa6.68□□□□□ -1.34
LSM2-209ENST00000470083 GAGE10A6NGK3 116 aa6.67□□□□□ -1.34
LSM2-209ENST00000470083 PPP1R2P9O14990 202 aa6.67□□□□□ -1.34
LSM2-209ENST00000470083 LINC01561Q8N1V8 128 aa6.67□□□□□ -1.34
LSM2-209ENST00000470083 OCC1Q8TAD7 63 aa6.67□□□□□ -1.34
LSM2-209ENST00000470083 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
LSM2-209ENST00000470083 A0A1B0GUT8 65 aa6.66□□□□□ -1.34
LSM2-209ENST00000470083 TCAPO15273 167 aa6.66□□□□□ -1.34
LSM2-209ENST00000470083 PRSS2P07478 247 aa6.66□□□□□ -1.34
LSM2-209ENST00000470083 CKS1BP61024 79 aa6.66□□□□□ -1.34
LSM2-209ENST00000470083 RPL32P62910 135 aaKnown RBP6.66□□□□□ -1.34
LSM2-209ENST00000470083 PNRC1Q12796 327 aaPredicted RBP6.66□□□□□ -1.34
LSM2-209ENST00000470083 DAND5Q8N907 189 aa6.66□□□□□ -1.34
LSM2-209ENST00000470083 PRSS47A8MTI9 375 aa6.65□□□□□ -1.34
LSM2-209ENST00000470083 GATCO43716 136 aaKnown RBP6.65□□□□□ -1.34
LSM2-209ENST00000470083 CT83Q5H943 113 aa6.65□□□□□ -1.34
LSM2-209ENST00000470083 M0R2T5 61 aa6.64□□□□□ -1.35
LSM2-209ENST00000470083 PRLHP81277 87 aa6.64□□□□□ -1.35
LSM2-209ENST00000470083 FAM231DQ6ZW35 169 aa6.64□□□□□ -1.35
LSM2-209ENST00000470083 PLEKHB2Q96CS7 222 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms