RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 PSORS1C2Q9UIG4 136 aa8.17□□□□□ -1.1
CPSF4-210ENST00000469897 D6R8Y8 96 aa8.16□□□□□ -1.1
CPSF4-210ENST00000469897 RPL32P62910 135 aaKnown RBP8.16□□□□□ -1.1
CPSF4-210ENST00000469897 RNF151Q2KHN1 245 aa8.16□□□□□ -1.1
CPSF4-210ENST00000469897 ORAOV1Q8WV07 137 aa8.16□□□□□ -1.1
CPSF4-210ENST00000469897 IGHV3OR16-9A0A0B4J2B5 98 aa8.15□□□□□ -1.1
CPSF4-210ENST00000469897 MT-ND6P03923 174 aa8.15□□□□□ -1.1
CPSF4-210ENST00000469897 OR10D4PQ8NGN7 298 aa8.15□□□□□ -1.1
CPSF4-210ENST00000469897 SMIM2Q9BVW6 85 aa8.15□□□□□ -1.1
CPSF4-210ENST00000469897 F8W036 122 aa8.14□□□□□ -1.11
CPSF4-210ENST00000469897 NPYP01303 97 aa8.14□□□□□ -1.11
CPSF4-210ENST00000469897 C1orf137Q5JT78 98 aa8.14□□□□□ -1.11
CPSF4-210ENST00000469897 C10orf25Q5T742 122 aa8.14□□□□□ -1.11
CPSF4-210ENST00000469897 UNQ6190/PRO20217Q6UXQ8 127 aa8.14□□□□□ -1.11
CPSF4-210ENST00000469897 SPANXA1Q9NS26 97 aa8.14□□□□□ -1.11
CPSF4-210ENST00000469897 MRPL35Q9NZE8 188 aaKnown RBP8.14□□□□□ -1.11
CPSF4-210ENST00000469897 A0A1B0GXF2 115 aa8.13□□□□□ -1.11
CPSF4-210ENST00000469897 S100A8P05109 93 aa8.13□□□□□ -1.11
CPSF4-210ENST00000469897 HBBP68871 147 aa8.13□□□□□ -1.11
CPSF4-210ENST00000469897 MRPS36P82909 103 aaKnown RBP8.13□□□□□ -1.11
CPSF4-210ENST00000469897 IMMP2LQ96T52 175 aa8.13□□□□□ -1.11
CPSF4-210ENST00000469897 FAM168BA1KXE4 195 aa8.12□□□□□ -1.11
CPSF4-210ENST00000469897 IFITM10A6NMD0 228 aa8.12□□□□□ -1.11
CPSF4-210ENST00000469897 PPBPP02775 128 aa8.12□□□□□ -1.11
CPSF4-210ENST00000469897 RAB5AP20339 215 aa8.12□□□□□ -1.11
CPSF4-210ENST00000469897 TMEM136Q6ZRR5 245 aa8.12□□□□□ -1.11
CPSF4-210ENST00000469897 SMDT1Q9H4I9 107 aa8.12□□□□□ -1.11
CPSF4-210ENST00000469897 RNF213Q63HN8 5207 aa8.11□□□□□ -1.11
CPSF4-210ENST00000469897 LRP2P98164 4655 aa8.11□□□□□ -1.11
CPSF4-210ENST00000469897 A0A087WZ39 114 aa8.11□□□□□ -1.11
CPSF4-210ENST00000469897 F8WDY8 70 aa8.11□□□□□ -1.11
CPSF4-210ENST00000469897 NDUFA1O15239 70 aa8.11□□□□□ -1.11
CPSF4-210ENST00000469897 KRTAP11-1Q8IUC1 163 aa8.11□□□□□ -1.11
CPSF4-210ENST00000469897 C6orf48Q9UBA6 75 aa8.11□□□□□ -1.11
CPSF4-210ENST00000469897 GAGE2EQ4V326 116 aa8.1□□□□□ -1.11
CPSF4-210ENST00000469897 ORMDL3Q8N138 153 aa8.1□□□□□ -1.11
CPSF4-210ENST00000469897 PRELID3AQ96N28 172 aa8.1□□□□□ -1.11
CPSF4-210ENST00000469897 GAGE2DQ9UEU5 116 aa8.1□□□□□ -1.11
CPSF4-210ENST00000469897 LOC389332A0A1B0GUA5 103 aa8.09□□□□□ -1.11
CPSF4-210ENST00000469897 IGLV7-43P04211 117 aa8.09□□□□□ -1.11
CPSF4-210ENST00000469897 IFI27P40305 119 aaPredicted RBP8.09□□□□□ -1.11
CPSF4-210ENST00000469897 KIAA0087Q14695 138 aa8.09□□□□□ -1.11
CPSF4-210ENST00000469897 LINC00242Q5T6M2 205 aa8.09□□□□□ -1.11
CPSF4-210ENST00000469897 TGIF2-C20orf24A0A0A6YYL0 155 aa8.08□□□□□ -1.12
CPSF4-210ENST00000469897 TLX1NBP0CAT3 122 aa8.08□□□□□ -1.12
CPSF4-210ENST00000469897 FAM19A5Q7Z5A7 132 aaPredicted RBP8.08□□□□□ -1.12
CPSF4-210ENST00000469897 PYGO1Q9Y3Y4 419 aa8.08□□□□□ -1.12
CPSF4-210ENST00000469897 IGLV4-3A0A075B6K6 122 aa8.07□□□□□ -1.12
CPSF4-210ENST00000469897 ZC2HC1BQ5TFG8 222 aa8.07□□□□□ -1.12
CPSF4-210ENST00000469897 C2orf82Q6UX34 121 aa8.07□□□□□ -1.12
CPSF4-210ENST00000469897 KRTAP7-1Q8IUC3 87 aa8.07□□□□□ -1.12
CPSF4-210ENST00000469897 PRR26Q8N8Z3 221 aa8.07□□□□□ -1.12
CPSF4-210ENST00000469897 PRSS47A8MTI9 375 aa8.06□□□□□ -1.12
CPSF4-210ENST00000469897 IFITM2Q01629 132 aa8.06□□□□□ -1.12
CPSF4-210ENST00000469897 ATP5L2Q7Z4Y8 100 aa8.06□□□□□ -1.12
CPSF4-210ENST00000469897 DIRC1Q969H9 104 aa8.06□□□□□ -1.12
CPSF4-210ENST00000469897 TMEM141Q96I45 108 aa8.06□□□□□ -1.12
CPSF4-210ENST00000469897 TEX43Q6ZNM6 134 aa8.05□□□□□ -1.12
CPSF4-210ENST00000469897 UBE2D1P51668 147 aa8.04□□□□□ -1.12
CPSF4-210ENST00000469897 TRBV30A0A0K0K1B3 111 aa8.03□□□□□ -1.12
CPSF4-210ENST00000469897 NDUFC2-KCTD14E9PQ53 114 aa8.03□□□□□ -1.12
CPSF4-210ENST00000469897 H0Y9J4 135 aa8.03□□□□□ -1.12
CPSF4-210ENST00000469897 UBE2BP63146 152 aa8.03□□□□□ -1.12
CPSF4-210ENST00000469897 C9orf129Q5T035 196 aaKnown RBP8.03□□□□□ -1.12
CPSF4-210ENST00000469897 C2orf66Q6UXQ4 117 aa8.03□□□□□ -1.12
CPSF4-210ENST00000469897 Q8N8P6 123 aa8.03□□□□□ -1.12
CPSF4-210ENST00000469897 PACRGQ96M98 296 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-210ENST00000469897 VCX2Q9H322 139 aa8.03□□□□□ -1.12
CPSF4-210ENST00000469897 MAP1LC3AQ9H492 121 aa8.03□□□□□ -1.12
CPSF4-210ENST00000469897 M0QXV9 152 aa8.02□□□□□ -1.13
CPSF4-210ENST00000469897 C2orf88Q9BSF0 95 aa8.02□□□□□ -1.13
CPSF4-210ENST00000469897 CYSLTR1Q9Y271 337 aa8.02□□□□□ -1.13
CPSF4-210ENST00000469897 LAMTOR2Q9Y2Q5 125 aa8.02□□□□□ -1.13
CPSF4-210ENST00000469897 MT-ND4LP03901 98 aa8.01□□□□□ -1.13
CPSF4-210ENST00000469897 C6orf226Q5I0X4 101 aa8.01□□□□□ -1.13
CPSF4-210ENST00000469897 Q6ZN92 141 aa8.01□□□□□ -1.13
CPSF4-210ENST00000469897 LINC01561Q8N1V8 128 aa8.01□□□□□ -1.13
CPSF4-210ENST00000469897 AMELXQ99217 191 aa8.01□□□□□ -1.13
CPSF4-210ENST00000469897 TOMM7Q9P0U1 55 aa8.01□□□□□ -1.13
CPSF4-210ENST00000469897 PRSS2P07478 247 aa8□□□□□ -1.13
CPSF4-210ENST00000469897 CKS1BP61024 79 aa8□□□□□ -1.13
CPSF4-210ENST00000469897 LINC00173Q6ZV60 143 aa8□□□□□ -1.13
CPSF4-210ENST00000469897 LINC00469Q8N7U9 141 aa8□□□□□ -1.13
CPSF4-210ENST00000469897 ANAPC16Q96DE5 110 aa8□□□□□ -1.13
CPSF4-210ENST00000469897 IGIPA6NJ69 53 aa7.99□□□□□ -1.13
CPSF4-210ENST00000469897 ORMDL2Q53FV1 153 aa7.99□□□□□ -1.13
CPSF4-210ENST00000469897 KRTAP1-4P0C5Y4 121 aa7.98□□□□□ -1.13
CPSF4-210ENST00000469897 PNRC1Q12796 327 aaPredicted RBP7.98□□□□□ -1.13
CPSF4-210ENST00000469897 ALKBH7Q9BT30 221 aaPredicted RBP7.98□□□□□ -1.13
CPSF4-210ENST00000469897 C22orf24Q9Y442 160 aa7.98□□□□□ -1.13
CPSF4-210ENST00000469897 IGLV1-50A0A075B6I6 118 aa7.97□□□□□ -1.13
CPSF4-210ENST00000469897 FAM19A3Q7Z5A8 133 aa7.97□□□□□ -1.13
CPSF4-210ENST00000469897 XAGE1AQ9HD64 81 aa7.97□□□□□ -1.13
CPSF4-210ENST00000469897 CDKN2A-AS1Q9UH64 79 aa7.97□□□□□ -1.13
CPSF4-210ENST00000469897 LPAP08519 4548 aa7.97□□□□□ -1.13
CPSF4-210ENST00000469897 NPSP0C0P6 89 aa7.96□□□□□ -1.14
CPSF4-210ENST00000469897 Q8IZM0 81 aa7.96□□□□□ -1.14
CPSF4-210ENST00000469897 CTDSP1Q9GZU7 261 aa7.96□□□□□ -1.14
CPSF4-210ENST00000469897 NXT2Q9NPJ8 142 aaKnown RBP7.96□□□□□ -1.14
CPSF4-210ENST00000469897 K7EMI3 77 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 324.2 ms