RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 OR10D4PQ8NGN7 298 aa6.84□□□□□ -1.31
COL4A3-204ENST00000469504 CAMK2N2Q96S95 79 aa6.84□□□□□ -1.31
COL4A3-204ENST00000469504 TNXBP22105 4242 aa6.83□□□□□ -1.32
COL4A3-204ENST00000469504 TRAV13-1A0A0B4J241 112 aa6.83□□□□□ -1.32
COL4A3-204ENST00000469504 A0A0J9YXV3 536 aa6.83□□□□□ -1.32
COL4A3-204ENST00000469504 SMKR1H3BMG3 65 aa6.83□□□□□ -1.32
COL4A3-204ENST00000469504 PPBPP02775 128 aa6.83□□□□□ -1.32
COL4A3-204ENST00000469504 CKS2P33552 79 aa6.83□□□□□ -1.32
COL4A3-204ENST00000469504 LINC00526Q96FQ7 95 aa6.83□□□□□ -1.32
COL4A3-204ENST00000469504 SPANXA1Q9NS26 97 aa6.83□□□□□ -1.32
COL4A3-204ENST00000469504 MRPS36P82909 103 aaKnown RBP6.82□□□□□ -1.32
COL4A3-204ENST00000469504 GAGE2BQ13066 116 aa6.82□□□□□ -1.32
COL4A3-204ENST00000469504 UBR4Q5T4S7 5183 aa6.81□□□□□ -1.32
COL4A3-204ENST00000469504 TNFRSF6BO95407 300 aa6.81□□□□□ -1.32
COL4A3-204ENST00000469504 HBBP68871 147 aa6.81□□□□□ -1.32
COL4A3-204ENST00000469504 SPAG11BQ08648 103 aa6.81□□□□□ -1.32
COL4A3-204ENST00000469504 SRSF9Q13242 221 aaKnown RBP eCLIP6.81□□□□□ -1.32
COL4A3-204ENST00000469504 Q6ZUT4 128 aa6.81□□□□□ -1.32
COL4A3-204ENST00000469504 SMIM2Q9BVW6 85 aa6.81□□□□□ -1.32
COL4A3-204ENST00000469504 MRPL35Q9NZE8 188 aaKnown RBP6.81□□□□□ -1.32
COL4A3-204ENST00000469504 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.8□□□□□ -1.32
COL4A3-204ENST00000469504 ATP5L2Q7Z4Y8 100 aa6.8□□□□□ -1.32
COL4A3-204ENST00000469504 IMMP2LQ96T52 175 aa6.8□□□□□ -1.32
COL4A3-204ENST00000469504 IGHV3OR16-9A0A0B4J2B5 98 aa6.79□□□□□ -1.32
COL4A3-204ENST00000469504 A0A1B0GXF2 115 aa6.79□□□□□ -1.32
COL4A3-204ENST00000469504 D6R8Y8 96 aa6.79□□□□□ -1.32
COL4A3-204ENST00000469504 KRTAP10-8P60410 259 aa6.79□□□□□ -1.32
COL4A3-204ENST00000469504 RNASE13Q5GAN3 156 aaKnown RBP6.79□□□□□ -1.32
COL4A3-204ENST00000469504 C5orf38Q86SI9 138 aa6.79□□□□□ -1.32
COL4A3-204ENST00000469504 A0A1W2PNN7 141 aa6.78□□□□□ -1.32
COL4A3-204ENST00000469504 C9JQL5 133 aa6.78□□□□□ -1.32
COL4A3-204ENST00000469504 NDUFA1O15239 70 aa6.78□□□□□ -1.32
COL4A3-204ENST00000469504 TLX1NBP0CAT3 122 aa6.78□□□□□ -1.32
COL4A3-204ENST00000469504 RAB5AP20339 215 aa6.78□□□□□ -1.32
COL4A3-204ENST00000469504 RPL18AQ02543 176 aaKnown RBP6.78□□□□□ -1.32
COL4A3-204ENST00000469504 C9orf116Q5BN46 136 aaPredicted RBP6.78□□□□□ -1.32
COL4A3-204ENST00000469504 ORMDL3Q8N138 153 aa6.78□□□□□ -1.32
COL4A3-204ENST00000469504 LAMTOR2Q9Y2Q5 125 aa6.78□□□□□ -1.32
COL4A3-204ENST00000469504 PYGO1Q9Y3Y4 419 aa6.78□□□□□ -1.32
COL4A3-204ENST00000469504 IFITM10A6NMD0 228 aa6.77□□□□□ -1.33
COL4A3-204ENST00000469504 IFI27P40305 119 aaPredicted RBP6.77□□□□□ -1.33
COL4A3-204ENST00000469504 RPL39P62891 51 aaKnown RBP6.77□□□□□ -1.33
COL4A3-204ENST00000469504 MRPL54Q6P161 138 aaKnown RBP6.77□□□□□ -1.33
COL4A3-204ENST00000469504 ORAOV1Q8WV07 137 aa6.77□□□□□ -1.33
COL4A3-204ENST00000469504 TGIF2-C20orf24A0A0A6YYL0 155 aa6.76□□□□□ -1.33
COL4A3-204ENST00000469504 PRSS47A8MTI9 375 aa6.76□□□□□ -1.33
COL4A3-204ENST00000469504 EIF4EBP3O60516 100 aaPredicted RBP6.76□□□□□ -1.33
COL4A3-204ENST00000469504 MT-ND6P03923 174 aa6.76□□□□□ -1.33
COL4A3-204ENST00000469504 TMEM136Q6ZRR5 245 aa6.76□□□□□ -1.33
COL4A3-204ENST00000469504 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
COL4A3-204ENST00000469504 PSORS1C2Q9UIG4 136 aa6.76□□□□□ -1.33
COL4A3-204ENST00000469504 A0A087WZ39 114 aa6.75□□□□□ -1.33
COL4A3-204ENST00000469504 NPYP01303 97 aa6.75□□□□□ -1.33
COL4A3-204ENST00000469504 NPSP0C0P6 89 aa6.75□□□□□ -1.33
COL4A3-204ENST00000469504 SRSF3P84103 164 aaKnown RBP6.75□□□□□ -1.33
COL4A3-204ENST00000469504 PNRC1Q12796 327 aaPredicted RBP6.75□□□□□ -1.33
COL4A3-204ENST00000469504 LINC01561Q8N1V8 128 aa6.75□□□□□ -1.33
COL4A3-204ENST00000469504 FAM104AQ969W3 186 aa6.75□□□□□ -1.33
COL4A3-204ENST00000469504 LRP2P98164 4655 aa6.74□□□□□ -1.33
COL4A3-204ENST00000469504 TRBV30A0A0K0K1B3 111 aa6.74□□□□□ -1.33
COL4A3-204ENST00000469504 K7EMI3 77 aa6.74□□□□□ -1.33
COL4A3-204ENST00000469504 C1orf137Q5JT78 98 aa6.74□□□□□ -1.33
COL4A3-204ENST00000469504 TMEM141Q96I45 108 aa6.74□□□□□ -1.33
COL4A3-204ENST00000469504 PRELID3AQ96N28 172 aa6.74□□□□□ -1.33
COL4A3-204ENST00000469504 OPRPNQ99935 248 aaPredicted RBP6.74□□□□□ -1.33
COL4A3-204ENST00000469504 Q6ZN92 141 aa6.73□□□□□ -1.33
COL4A3-204ENST00000469504 TEX43Q6ZNM6 134 aa6.73□□□□□ -1.33
COL4A3-204ENST00000469504 DIRC1Q969H9 104 aa6.73□□□□□ -1.33
COL4A3-204ENST00000469504 ANAPC16Q96DE5 110 aa6.73□□□□□ -1.33
COL4A3-204ENST00000469504 C2orf88Q9BSF0 95 aa6.73□□□□□ -1.33
COL4A3-204ENST00000469504 MAP1LC3AQ9H492 121 aa6.73□□□□□ -1.33
COL4A3-204ENST00000469504 IGLV4-3A0A075B6K6 122 aa6.72□□□□□ -1.33
COL4A3-204ENST00000469504 G0S2P27469 103 aa6.72□□□□□ -1.33
COL4A3-204ENST00000469504 LINC00242Q5T6M2 205 aa6.72□□□□□ -1.33
COL4A3-204ENST00000469504 PHF5AQ7RTV0 110 aaKnown RBP6.72□□□□□ -1.33
COL4A3-204ENST00000469504 C6orf48Q9UBA6 75 aa6.72□□□□□ -1.33
COL4A3-204ENST00000469504 MT-ND4LP03901 98 aa6.71□□□□□ -1.34
COL4A3-204ENST00000469504 IGLV7-43P04211 117 aa6.71□□□□□ -1.34
COL4A3-204ENST00000469504 KIAA0087Q14695 138 aa6.71□□□□□ -1.34
COL4A3-204ENST00000469504 ODF1Q14990 250 aa6.71□□□□□ -1.34
COL4A3-204ENST00000469504 ORMDL2Q53FV1 153 aa6.71□□□□□ -1.34
COL4A3-204ENST00000469504 UNQ6190/PRO20217Q6UXQ8 127 aa6.71□□□□□ -1.34
COL4A3-204ENST00000469504 PACRGQ96M98 296 aaPredicted RBP6.71□□□□□ -1.34
COL4A3-204ENST00000469504 CYSLTR1Q9Y271 337 aa6.71□□□□□ -1.34
COL4A3-204ENST00000469504 A0A1B0GVG6 124 aa6.7□□□□□ -1.34
COL4A3-204ENST00000469504 NDUFC2-KCTD14E9PQ53 114 aa6.7□□□□□ -1.34
COL4A3-204ENST00000469504 UBE2D1P51668 147 aa6.7□□□□□ -1.34
COL4A3-204ENST00000469504 SEC11AP67812 179 aa6.7□□□□□ -1.34
COL4A3-204ENST00000469504 PAPPA-AS1Q5QFB9 102 aa6.7□□□□□ -1.34
COL4A3-204ENST00000469504 C10orf25Q5T742 122 aa6.7□□□□□ -1.34
COL4A3-204ENST00000469504 Q8N8P6 123 aa6.7□□□□□ -1.34
COL4A3-204ENST00000469504 GAGE2EQ4V326 116 aa6.69□□□□□ -1.34
COL4A3-204ENST00000469504 C2orf66Q6UXQ4 117 aa6.69□□□□□ -1.34
COL4A3-204ENST00000469504 FAM19A3Q7Z5A8 133 aa6.69□□□□□ -1.34
COL4A3-204ENST00000469504 AMELXQ99217 191 aa6.69□□□□□ -1.34
COL4A3-204ENST00000469504 VCX2Q9H322 139 aa6.69□□□□□ -1.34
COL4A3-204ENST00000469504 NXT2Q9NPJ8 142 aaKnown RBP6.69□□□□□ -1.34
COL4A3-204ENST00000469504 GAGE2DQ9UEU5 116 aa6.69□□□□□ -1.34
COL4A3-204ENST00000469504 H0Y9J4 135 aa6.68□□□□□ -1.34
COL4A3-204ENST00000469504 M0QXV9 152 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms