RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 TRBV10-1A0A0K0K1A3 114 aa6.36□□□□□ -1.39
SMARCE1-207ENST00000469334 H3BQ85 93 aa6.36□□□□□ -1.39
SMARCE1-207ENST00000469334 LY6HO94772 140 aa6.36□□□□□ -1.39
SMARCE1-207ENST00000469334 IGLV1-40P01703 118 aa6.36□□□□□ -1.39
SMARCE1-207ENST00000469334 DYNLRB2Q8TF09 96 aa6.36□□□□□ -1.39
SMARCE1-207ENST00000469334 ESRGQ1W209 222 aa6.35□□□□□ -1.39
SMARCE1-207ENST00000469334 C11orf71Q6IPW1 123 aa6.35□□□□□ -1.39
SMARCE1-207ENST00000469334 BAHCC1Q9P281 2608 aa6.35□□□□□ -1.39
SMARCE1-207ENST00000469334 CELSR3Q9NYQ7 3312 aa6.35□□□□□ -1.39
SMARCE1-207ENST00000469334 ZNF561-AS1K7EIQ3 104 aa6.35□□□□□ -1.39
SMARCE1-207ENST00000469334 PMAIP1Q13794 54 aa6.35□□□□□ -1.39
SMARCE1-207ENST00000469334 Q6ZRU5 148 aa6.35□□□□□ -1.39
SMARCE1-207ENST00000469334 Q6ZVQ6 151 aa6.35□□□□□ -1.39
SMARCE1-207ENST00000469334 DOPEY2Q9Y3R5 2298 aa6.35□□□□□ -1.39
SMARCE1-207ENST00000469334 C6orf223Q8N319 242 aa6.34□□□□□ -1.39
SMARCE1-207ENST00000469334 C11orf68Q9H3H3 251 aaKnown RBP6.34□□□□□ -1.39
SMARCE1-207ENST00000469334 PTPRQQ9UMZ3 2332 aa6.34□□□□□ -1.39
SMARCE1-207ENST00000469334 ZFHX2Q9C0A1 2572 aaPredicted RBP6.34□□□□□ -1.39
SMARCE1-207ENST00000469334 KALRNO60229 2985 aa6.34□□□□□ -1.4
SMARCE1-207ENST00000469334 NREPQ16612 68 aa6.34□□□□□ -1.4
SMARCE1-207ENST00000469334 C9orf66Q5T8R8 295 aa6.34□□□□□ -1.4
SMARCE1-207ENST00000469334 C11orf44Q8N8P7 122 aa6.34□□□□□ -1.4
SMARCE1-207ENST00000469334 TMEM254Q8TBM7 123 aa6.34□□□□□ -1.4
SMARCE1-207ENST00000469334 HAMPP81172 84 aa6.33□□□□□ -1.4
SMARCE1-207ENST00000469334 FBXL19-AS1Q494R0 122 aa6.33□□□□□ -1.4
SMARCE1-207ENST00000469334 Q8N3U1 123 aa6.33□□□□□ -1.4
SMARCE1-207ENST00000469334 TOMM7Q9P0U1 55 aa6.33□□□□□ -1.4
SMARCE1-207ENST00000469334 UBE2L6O14933 153 aa6.32□□□□□ -1.4
SMARCE1-207ENST00000469334 LINC01560Q8TB33 94 aa6.32□□□□□ -1.4
SMARCE1-207ENST00000469334 BPESC1Q9GZL8 116 aa6.32□□□□□ -1.4
SMARCE1-207ENST00000469334 PRRC2CQ9Y520 2896 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-207ENST00000469334 CCL21O00585 134 aa6.32□□□□□ -1.4
SMARCE1-207ENST00000469334 PRYO14603 147 aa6.32□□□□□ -1.4
SMARCE1-207ENST00000469334 IGHV4-38-2P0DP08 117 aa6.32□□□□□ -1.4
SMARCE1-207ENST00000469334 HTN1P15515 57 aa6.32□□□□□ -1.4
SMARCE1-207ENST00000469334 Q6ZTI0 123 aa6.32□□□□□ -1.4
SMARCE1-207ENST00000469334 TM2D3Q9BRN9 247 aa6.32□□□□□ -1.4
SMARCE1-207ENST00000469334 RP1L1Q8IWN7 2480 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-207ENST00000469334 CNOT1A5YKK6 2376 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-207ENST00000469334 SPTBN4Q9H254 2564 aa6.31□□□□□ -1.4
SMARCE1-207ENST00000469334 NTM-AS1Q6ZSK4 140 aa6.31□□□□□ -1.4
SMARCE1-207ENST00000469334 MPLKIPQ8TAP9 179 aa6.31□□□□□ -1.4
SMARCE1-207ENST00000469334 A0A087WZ39 114 aa6.31□□□□□ -1.4
SMARCE1-207ENST00000469334 A0A096LNT2 108 aa6.31□□□□□ -1.4
SMARCE1-207ENST00000469334 TMEM89A2RUT3 159 aa6.31□□□□□ -1.4
SMARCE1-207ENST00000469334 FUSP35637 526 aaKnown RBP eCLIP6.31□□□□□ -1.4
SMARCE1-207ENST00000469334 FAM229BQ4G0N7 80 aa6.31□□□□□ -1.4
SMARCE1-207ENST00000469334 RIF1Q5UIP0 2472 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-207ENST00000469334 NANOS2P60321 138 aaKnown RBP6.3□□□□□ -1.4
SMARCE1-207ENST00000469334 ZNF292O60281 2723 aa6.3□□□□□ -1.4
SMARCE1-207ENST00000469334 A6NDX4 124 aa6.29□□□□□ -1.4
SMARCE1-207ENST00000469334 CD164Q04900 197 aa6.29□□□□□ -1.4
SMARCE1-207ENST00000469334 IGHV3OR16-9A0A0B4J2B5 98 aa6.29□□□□□ -1.4
SMARCE1-207ENST00000469334 LMO4P61968 165 aa6.29□□□□□ -1.4
SMARCE1-207ENST00000469334 LINC00575Q6W349 94 aa6.29□□□□□ -1.4
SMARCE1-207ENST00000469334 BPY2O14599 106 aa6.28□□□□□ -1.4
SMARCE1-207ENST00000469334 INSP01308 110 aa6.28□□□□□ -1.4
SMARCE1-207ENST00000469334 PTPRZ1P23471 2315 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1-207ENST00000469334 GVINP1Q7Z2Y8 2422 aa6.28□□□□□ -1.4
SMARCE1-207ENST00000469334 Q1T7F1 81 aa6.28□□□□□ -1.4
SMARCE1-207ENST00000469334 Q6ZTC4 211 aa6.28□□□□□ -1.4
SMARCE1-207ENST00000469334 IL17DQ8TAD2 202 aa6.28□□□□□ -1.4
SMARCE1-207ENST00000469334 CACNA1BQ00975 2339 aa6.27□□□□□ -1.41
SMARCE1-207ENST00000469334 PCNX1Q96RV3 2341 aa6.27□□□□□ -1.41
SMARCE1-207ENST00000469334 GPR179Q6PRD1 2367 aa6.26□□□□□ -1.41
SMARCE1-207ENST00000469334 DEFB131AP59861 70 aa6.26□□□□□ -1.41
SMARCE1-207ENST00000469334 COX17Q14061 63 aa6.26□□□□□ -1.41
SMARCE1-207ENST00000469334 Q8IZM0 81 aa6.26□□□□□ -1.41
SMARCE1-207ENST00000469334 RNASE1P07998 156 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-207ENST00000469334 GNLYP22749 145 aa6.25□□□□□ -1.41
SMARCE1-207ENST00000469334 APC2O95996 2303 aa6.25□□□□□ -1.41
SMARCE1-207ENST00000469334 EP300Q09472 2414 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-207ENST00000469334 LY6EQ16553 131 aa6.25□□□□□ -1.41
SMARCE1-207ENST00000469334 MUC7Q8TAX7 377 aa6.25□□□□□ -1.41
SMARCE1-207ENST00000469334 OCR1Q9BZK8 76 aa6.25□□□□□ -1.41
SMARCE1-207ENST00000469334 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
SMARCE1-207ENST00000469334 H3BUX3 64 aa6.24□□□□□ -1.41
SMARCE1-207ENST00000469334 M0R2N4 97 aa6.24□□□□□ -1.41
SMARCE1-207ENST00000469334 C6orf99Q4VX62 202 aa6.24□□□□□ -1.41
SMARCE1-207ENST00000469334 PIEZO2Q9H5I5 2752 aa6.24□□□□□ -1.41
SMARCE1-207ENST00000469334 IGHV4-31P0DP07 118 aa6.23□□□□□ -1.41
SMARCE1-207ENST00000469334 DAD1P61803 113 aa6.23□□□□□ -1.41
SMARCE1-207ENST00000469334 ZNF843Q8N446 348 aa6.23□□□□□ -1.41
SMARCE1-207ENST00000469334 DMXL2Q8TDJ6 3036 aa6.23□□□□□ -1.41
SMARCE1-207ENST00000469334 TRGV1A0A0A0MS02 117 aa6.23□□□□□ -1.41
SMARCE1-207ENST00000469334 PRM2P04554 102 aa6.23□□□□□ -1.41
SMARCE1-207ENST00000469334 GRNP28799 593 aaKnown RBP6.23□□□□□ -1.41
SMARCE1-207ENST00000469334 DEFB124Q8NES8 71 aa6.22□□□□□ -1.41
SMARCE1-207ENST00000469334 SPATA3Q8NHX4 192 aa6.22□□□□□ -1.41
SMARCE1-207ENST00000469334 SPTBN1Q01082 2364 aaKnown RBP6.22□□□□□ -1.41
SMARCE1-207ENST00000469334 BRD3OSQ6XYD6 125 aa6.22□□□□□ -1.41
SMARCE1-207ENST00000469334 OXLD1Q5BKU9 147 aa6.21□□□□□ -1.42
SMARCE1-207ENST00000469334 BBC3Q96PG8 261 aaPredicted RBP6.21□□□□□ -1.42
SMARCE1-207ENST00000469334 MAP1BP46821 2468 aaKnown RBP6.21□□□□□ -1.42
SMARCE1-207ENST00000469334 MGAQ8IWI9 3026 aa6.21□□□□□ -1.42
SMARCE1-207ENST00000469334 DEFB114Q30KQ6 69 aa6.2□□□□□ -1.42
SMARCE1-207ENST00000469334 IGKV3OR2-268A0A0C4DH90 116 aa6.2□□□□□ -1.42
SMARCE1-207ENST00000469334 LINC00959A0A1B0GUT2 108 aa6.2□□□□□ -1.42
SMARCE1-207ENST00000469334 LYRM9A8MSI8 78 aa6.2□□□□□ -1.42
SMARCE1-207ENST00000469334 IGKV4-1P06312 121 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms