RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ASXL3Q9C0F0 2248 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 HECTD1Q9ULT8 2610 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 KNL1Q8NG31 2342 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 PLXNB1O43157 2135 aa3.47□□□□□ -1.85
SF3B1-207ENST00000468925 IGF2RP11717 2491 aa3.47□□□□□ -1.85
SF3B1-207ENST00000468925 MALRD1Q5VYJ5 2156 aa3.47□□□□□ -1.85
SF3B1-207ENST00000468925 IGHV3-72A0A0B4J1Y9 119 aa3.47□□□□□ -1.85
SF3B1-207ENST00000468925 TRBV7-4A0A0J9YYF1 115 aa3.47□□□□□ -1.85
SF3B1-207ENST00000468925 H3BUA1 57 aa3.47□□□□□ -1.85
SF3B1-207ENST00000468925 CCL21O00585 134 aa3.47□□□□□ -1.85
SF3B1-207ENST00000468925 UBE2L6O14933 153 aa3.47□□□□□ -1.85
SF3B1-207ENST00000468925 FUSP35637 526 aaKnown RBP eCLIP3.47□□□□□ -1.85
SF3B1-207ENST00000468925 HILS1P60008 231 aa3.47□□□□□ -1.85
SF3B1-207ENST00000468925 Q6ZS52 159 aa3.47□□□□□ -1.85
SF3B1-207ENST00000468925 MUC7Q8TAX7 377 aa3.47□□□□□ -1.85
SF3B1-207ENST00000468925 LINC01560Q8TB33 94 aa3.47□□□□□ -1.85
SF3B1-207ENST00000468925 TMEM254Q8TBM7 123 aa3.47□□□□□ -1.85
SF3B1-207ENST00000468925 ZNF625Q96I27 306 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-207ENST00000468925 OPRPNQ99935 248 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-207ENST00000468925 DEFB127Q9H1M4 99 aa3.47□□□□□ -1.85
SF3B1-207ENST00000468925 A0A087WZ39 114 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 A0A1B0GW54 56 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 CLPSL1A2RUU4 121 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 LY6G6DO95868 133 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 APELAP0DMC3 54 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 DEFB114Q30KQ6 69 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 C9orf66Q5T8R8 295 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 KTN1-AS1Q86SY8 53 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 MIR7-3HGQ8N6C7 128 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 Q8N6K4 173 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 PRR26Q8N8Z3 221 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 FAM218AQ96MZ4 157 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 TM2D3Q9BRN9 247 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 SND1-IT1Q9HBX3 110 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 RETNQ9HD89 108 aa3.46□□□□□ -1.86
SF3B1-207ENST00000468925 IGSF10Q6WRI0 2623 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 TEX15Q9BXT5 2789 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 IGHV1OR15-1A0A075B7D0 117 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 IGHV3-16A0A0C4DH30 117 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 EPOPA6NHQ4 379 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 LECT2O14960 151 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 GNRH2O43555 120 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 NDUFB1O75438 58 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 LINC01547P58512 204 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-207ENST00000468925 KRTAP10-11P60412 298 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 RPL36AP83881 106 aaKnown RBP3.45□□□□□ -1.86
SF3B1-207ENST00000468925 C9orf106Q8NAJ2 232 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 SMIM11BQ8TCY0 68 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 RPL36ALQ969Q0 106 aaKnown RBP3.45□□□□□ -1.86
SF3B1-207ENST00000468925 USMG5Q96IX5 58 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 CYP4F30PQ9H0H9 118 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 MAP6D1Q9H9H5 199 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 Q9HAA7 133 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 DNAJC13O75165 2243 aa3.45□□□□□ -1.86
SF3B1-207ENST00000468925 OTOGLQ3ZCN5 2332 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 ODF3BA8MYP8 253 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 SMIM1B2RUZ4 78 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 E7EQL1 145 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 K7EMT4 169 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 NCR3O14931 201 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 IGHV4-38-2P0DP08 117 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 GNLYP22749 145 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 UBE2AP49459 152 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 NREPQ16612 68 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 PRR9Q5T870 116 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 Q6ZSV7 163 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 DEFB119Q8N690 84 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 CDKN2A-AS1Q9UH64 79 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 SVILO95425 2214 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 ABCA1O95477 2261 aa3.44□□□□□ -1.86
SF3B1-207ENST00000468925 KALRNO60229 2985 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 PIEZO2Q9H5I5 2752 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 A0A087WYN8 130 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 IGHV7-81A0A0B4J1V7 117 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 TRBV10-1A0A0K0K1A3 114 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 TRBV6-4A0A1B0GX49 114 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 FAM74A4Q5TZK3 123 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 SOSTDC1Q6X4U4 206 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 ATP11AUNQ6ZP68 121 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 Q6ZQT0 140 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 Q6ZVQ6 151 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 PHF5AQ7RTV0 110 aaKnown RBP3.43□□□□□ -1.86
SF3B1-207ENST00000468925 C6orf223Q8N319 242 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 Q8N814 137 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 RMI2Q96E14 147 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 LINC00467Q9BRT7 94 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 LIMD2Q9BT23 127 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 CHCHD7Q9BUK0 85 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 ESM1Q9NQ30 184 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 LINC00474Q9P2X8 69 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 CFAP46Q8IYW2 2715 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 CACNA1EQ15878 2313 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 DMXL2Q8TDJ6 3036 aa3.43□□□□□ -1.86
SF3B1-207ENST00000468925 CNOT1A5YKK6 2376 aaKnown RBP3.43□□□□□ -1.86
SF3B1-207ENST00000468925 MYO9AB2RTY4 2548 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 hDV103S1A0JD37 113 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 IGKV2-29A2NJV5 120 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-207ENST00000468925 DNAJC9-AS1A6NH13 148 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 K7EQD1 137 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 BPY2O14599 106 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms