RNA–Protein interactions for RNA: ENST00000468528.5

NXF3-204, Transcript of nuclear RNA export factor 3, humanhuman

TSL 5

Gene NXF3, Length 535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-204ENST00000468528 KRTDAPP60985 99 aa4.81□□□□□ -1.64
NXF3-204ENST00000468528 LINC01561Q8N1V8 128 aa4.81□□□□□ -1.64
NXF3-204ENST00000468528 CHCHD10Q8WYQ3 142 aaPredicted RBP4.81□□□□□ -1.64
NXF3-204ENST00000468528 CHTOPQ9Y3Y2 248 aaKnown RBP4.81□□□□□ -1.64
NXF3-204ENST00000468528 IGKV2D-24A0A075B6R9 120 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 IGLV5-45A0A087WSX0 123 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 IGHV3OR16-9A0A0B4J2B5 98 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 IGKV3OR2-268A0A0C4DH90 116 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 H3BRM9 83 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 PSCAO43653 123 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 DPM2O94777 84 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 APOMO95445 188 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 C3orf79P0CE67 100 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 RNASE13Q5GAN3 156 aaKnown RBP4.8□□□□□ -1.64
NXF3-204ENST00000468528 LINC00242Q5T6M2 205 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 C1orf134Q5TEV5 83 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 LINC01545Q5VT33 79 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 CLPSL2Q6UWE3 100 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 C6orf223Q8N319 242 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 KRTAP1-5Q9BYS1 174 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 Q9HAA7 133 aa4.8□□□□□ -1.64
NXF3-204ENST00000468528 DYNC2H1Q8NCM8 4307 aaKnown RBP4.8□□□□□ -1.64
NXF3-204ENST00000468528 A0A087WZ39 114 aa4.79□□□□□ -1.64
NXF3-204ENST00000468528 COX7A2LO14548 114 aa4.79□□□□□ -1.64
NXF3-204ENST00000468528 XCL1P47992 114 aa4.79□□□□□ -1.64
NXF3-204ENST00000468528 OR10D4PQ8NGN7 298 aa4.79□□□□□ -1.64
NXF3-204ENST00000468528 CHAC1Q9BUX1 264 aa4.79□□□□□ -1.64
NXF3-204ENST00000468528 MRPL35Q9NZE8 188 aaKnown RBP4.79□□□□□ -1.64
NXF3-204ENST00000468528 IGLV4-69A0A075B6H9 119 aa4.78□□□□□ -1.64
NXF3-204ENST00000468528 IGLV10-54A0A075B6I4 117 aa4.78□□□□□ -1.64
NXF3-204ENST00000468528 A0A0J9YXV3 536 aa4.78□□□□□ -1.64
NXF3-204ENST00000468528 GAGE12HA6NDE8 117 aa4.78□□□□□ -1.64
NXF3-204ENST00000468528 C11orf86A6NJI1 115 aa4.78□□□□□ -1.64
NXF3-204ENST00000468528 F8WDY8 70 aa4.78□□□□□ -1.64
NXF3-204ENST00000468528 H0Y8G0 127 aa4.78□□□□□ -1.64
NXF3-204ENST00000468528 M0R2N4 97 aa4.78□□□□□ -1.64
NXF3-204ENST00000468528 IGKCP01834 107 aa4.78□□□□□ -1.64
NXF3-204ENST00000468528 FOXI1Q12951 378 aa4.78□□□□□ -1.64
NXF3-204ENST00000468528 C14orf177Q52M58 125 aa4.78□□□□□ -1.64
NXF3-204ENST00000468528 LINC00469Q8N7U9 141 aa4.78□□□□□ -1.64
NXF3-204ENST00000468528 STARD9Q9P2P6 4700 aa4.78□□□□□ -1.64
NXF3-204ENST00000468528 IGHV1-58A0A0C4DH39 117 aa4.77□□□□□ -1.65
NXF3-204ENST00000468528 HERVK_113P61574 105 aa4.77□□□□□ -1.65
NXF3-204ENST00000468528 TMEM170BQ5T4T1 132 aa4.77□□□□□ -1.65
NXF3-204ENST00000468528 ZC2HC1BQ5TFG8 222 aa4.77□□□□□ -1.65
NXF3-204ENST00000468528 KRTAP26-1Q6PEX3 210 aa4.77□□□□□ -1.65
NXF3-204ENST00000468528 SFTA2Q6UW10 78 aa4.77□□□□□ -1.65
NXF3-204ENST00000468528 Q6ZRN7 208 aaPredicted RBP4.77□□□□□ -1.65
NXF3-204ENST00000468528 CDKN2A-AS1Q9UH64 79 aa4.77□□□□□ -1.65
NXF3-204ENST00000468528 HSBP1L1C9JCN9 74 aa4.76□□□□□ -1.65
NXF3-204ENST00000468528 COX6A2Q02221 97 aa4.76□□□□□ -1.65
NXF3-204ENST00000468528 JOSD1Q15040 202 aaPredicted RBP4.76□□□□□ -1.65
NXF3-204ENST00000468528 LINC00336Q6ZUF6 198 aa4.76□□□□□ -1.65
NXF3-204ENST00000468528 IGHV3-64A0A075B6Q5 118 aa4.75□□□□□ -1.65
NXF3-204ENST00000468528 ZNF22P17026 224 aaPredicted RBP4.75□□□□□ -1.65
NXF3-204ENST00000468528 CXCL5P42830 114 aa4.75□□□□□ -1.65
NXF3-204ENST00000468528 C5orf38Q86SI9 138 aa4.75□□□□□ -1.65
NXF3-204ENST00000468528 GVQW2A0A096LPI5 108 aaPredicted RBP4.74□□□□□ -1.65
NXF3-204ENST00000468528 IGLV5-39A0A0G2JS06 123 aa4.74□□□□□ -1.65
NXF3-204ENST00000468528 TMEM223A0PJW6 202 aa4.74□□□□□ -1.65
NXF3-204ENST00000468528 SMIM1B2RUZ4 78 aa4.74□□□□□ -1.65
NXF3-204ENST00000468528 PRSS2P07478 247 aa4.74□□□□□ -1.65
NXF3-204ENST00000468528 PLECQ15149 4684 aaKnown RBP4.74□□□□□ -1.65
NXF3-204ENST00000468528 C6orf226Q5I0X4 101 aa4.74□□□□□ -1.65
NXF3-204ENST00000468528 Q8IZM0 81 aa4.74□□□□□ -1.65
NXF3-204ENST00000468528 PLEKHB2Q96CS7 222 aa4.74□□□□□ -1.65
NXF3-204ENST00000468528 C2orf48Q96LS8 159 aa4.74□□□□□ -1.65
NXF3-204ENST00000468528 PMCHL2Q9BQD1 86 aa4.74□□□□□ -1.65
NXF3-204ENST00000468528 A0A087WTM6 91 aa4.73□□□□□ -1.65
NXF3-204ENST00000468528 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.73□□□□□ -1.65
NXF3-204ENST00000468528 USP17L23D6RBM5 183 aa4.73□□□□□ -1.65
NXF3-204ENST00000468528 E9PLD3 99 aa4.73□□□□□ -1.65
NXF3-204ENST00000468528 NMUP48645 174 aa4.73□□□□□ -1.65
NXF3-204ENST00000468528 MAPKAPK5-AS1Q8N8E1 139 aa4.73□□□□□ -1.65
NXF3-204ENST00000468528 C15orf56Q8N910 161 aa4.73□□□□□ -1.65
NXF3-204ENST00000468528 NTN5Q8WTR8 489 aaPredicted RBP4.73□□□□□ -1.65
NXF3-204ENST00000468528 ORAOV1Q8WV07 137 aa4.73□□□□□ -1.65
NXF3-204ENST00000468528 PKIGQ9Y2B9 76 aa4.73□□□□□ -1.65
NXF3-204ENST00000468528 hDV102S1A0JD36 115 aa4.72□□□□□ -1.65
NXF3-204ENST00000468528 LRCOL1A6NCL2 159 aa4.72□□□□□ -1.65
NXF3-204ENST00000468528 LINC00587B1AMM8 73 aa4.72□□□□□ -1.65
NXF3-204ENST00000468528 LEPROTO15243 131 aa4.72□□□□□ -1.65
NXF3-204ENST00000468528 RTL8CO15255 209 aa4.72□□□□□ -1.65
NXF3-204ENST00000468528 SPINK8P0C7L1 97 aa4.72□□□□□ -1.65
NXF3-204ENST00000468528 SMIM6P0DI80 62 aa4.72□□□□□ -1.65
NXF3-204ENST00000468528 CKS1BP61024 79 aa4.72□□□□□ -1.65
NXF3-204ENST00000468528 S100A12P80511 92 aa4.72□□□□□ -1.65
NXF3-204ENST00000468528 SPAG11BQ08648 103 aa4.72□□□□□ -1.65
NXF3-204ENST00000468528 PYY3Q5JQD4 70 aa4.72□□□□□ -1.65
NXF3-204ENST00000468528 COX7B2Q8TF08 81 aa4.72□□□□□ -1.65
NXF3-204ENST00000468528 LYSTQ99698 3801 aa4.72□□□□□ -1.65
NXF3-204ENST00000468528 J3QQQ9 107 aa4.71□□□□□ -1.66
NXF3-204ENST00000468528 NDUFA1O15239 70 aa4.71□□□□□ -1.66
NXF3-204ENST00000468528 LGALS3P17931 250 aaKnown RBP4.71□□□□□ -1.66
NXF3-204ENST00000468528 CNBPP62633 177 aaKnown RBP4.71□□□□□ -1.66
NXF3-204ENST00000468528 HERV-K104P63124 156 aa4.71□□□□□ -1.66
NXF3-204ENST00000468528 KIAA0087Q14695 138 aa4.71□□□□□ -1.66
NXF3-204ENST00000468528 Q8N814 137 aa4.71□□□□□ -1.66
NXF3-204ENST00000468528 VAMP8Q9BV40 100 aa4.71□□□□□ -1.66
NXF3-204ENST00000468528 TOMM7Q9P0U1 55 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms