RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 DNAH5Q8TE73 4624 aa11.3□□□□□ -0.6
VARS2-204ENST00000467717 S100A6P06703 90 aa11.29□□□□□ -0.6
VARS2-204ENST00000467717 PRSS1P07477 247 aa11.29□□□□□ -0.6
VARS2-204ENST00000467717 FABP4P15090 132 aa11.29□□□□□ -0.6
VARS2-204ENST00000467717 FAM19A3Q7Z5A8 133 aa11.29□□□□□ -0.6
VARS2-204ENST00000467717 SEC11AP67812 179 aa11.28□□□□□ -0.6
VARS2-204ENST00000467717 PACRGQ96M98 296 aaPredicted RBP11.28□□□□□ -0.6
VARS2-204ENST00000467717 HECTD4Q9Y4D8 3996 aa11.28□□□□□ -0.6
VARS2-204ENST00000467717 PKD1P98161 4303 aa11.27□□□□□ -0.61
VARS2-204ENST00000467717 IGHV3OR16-9A0A0B4J2B5 98 aa11.27□□□□□ -0.61
VARS2-204ENST00000467717 COX7A2LO14548 114 aa11.27□□□□□ -0.61
VARS2-204ENST00000467717 EREGO14944 169 aa11.27□□□□□ -0.61
VARS2-204ENST00000467717 LECT2O14960 151 aa11.27□□□□□ -0.61
VARS2-204ENST00000467717 TRAV12-1A0A0B4J245 112 aa11.26□□□□□ -0.61
VARS2-204ENST00000467717 A0A0J9YXV3 536 aa11.26□□□□□ -0.61
VARS2-204ENST00000467717 USP17L23D6RBM5 183 aa11.26□□□□□ -0.61
VARS2-204ENST00000467717 HERVK_113P63121 156 aa11.26□□□□□ -0.61
VARS2-204ENST00000467717 COX6A2Q02221 97 aa11.26□□□□□ -0.61
VARS2-204ENST00000467717 WFDC2Q14508 124 aa11.26□□□□□ -0.61
VARS2-204ENST00000467717 TINCRA0A1B0GVN0 87 aa11.25□□□□□ -0.61
VARS2-204ENST00000467717 MALP21145 153 aa11.25□□□□□ -0.61
VARS2-204ENST00000467717 CFAP161Q6P656 301 aa11.25□□□□□ -0.61
VARS2-204ENST00000467717 C5orf38Q86SI9 138 aa11.25□□□□□ -0.61
VARS2-204ENST00000467717 GEMIN7Q9H840 131 aaKnown RBP11.25□□□□□ -0.61
VARS2-204ENST00000467717 DYNC1H1Q14204 4646 aaKnown RBP11.24□□□□□ -0.61
VARS2-204ENST00000467717 KIAA1109Q2LD37 5005 aa11.24□□□□□ -0.61
VARS2-204ENST00000467717 C14orf177Q52M58 125 aa11.24□□□□□ -0.61
VARS2-204ENST00000467717 MAP1LC3CQ9BXW4 147 aa11.24□□□□□ -0.61
VARS2-204ENST00000467717 A0A087WZ39 114 aa11.23□□□□□ -0.61
VARS2-204ENST00000467717 Q8N814 137 aa11.23□□□□□ -0.61
VARS2-204ENST00000467717 CHTOPQ9Y3Y2 248 aaKnown RBP11.23□□□□□ -0.61
VARS2-204ENST00000467717 IGHV1-58A0A0C4DH39 117 aa11.22□□□□□ -0.61
VARS2-204ENST00000467717 H0Y8G0 127 aa11.22□□□□□ -0.61
VARS2-204ENST00000467717 IGLC3P0DOY3 106 aa11.22□□□□□ -0.61
VARS2-204ENST00000467717 HIST3H2BBQ8N257 126 aa11.22□□□□□ -0.61
VARS2-204ENST00000467717 C15orf56Q8N910 161 aa11.22□□□□□ -0.61
VARS2-204ENST00000467717 PKHD1P08F94 4074 aa11.22□□□□□ -0.61
VARS2-204ENST00000467717 IGLV4-69A0A075B6H9 119 aa11.21□□□□□ -0.61
VARS2-204ENST00000467717 APOMO95445 188 aa11.21□□□□□ -0.61
VARS2-204ENST00000467717 S100A2P29034 98 aa11.21□□□□□ -0.61
VARS2-204ENST00000467717 SNRPEP62304 92 aaKnown RBP11.21□□□□□ -0.61
VARS2-204ENST00000467717 LINC01561Q8N1V8 128 aa11.21□□□□□ -0.61
VARS2-204ENST00000467717 LINC00469Q8N7U9 141 aa11.21□□□□□ -0.61
VARS2-204ENST00000467717 CHAC1Q9BUX1 264 aa11.21□□□□□ -0.61
VARS2-204ENST00000467717 CDKN2A-AS1Q9UH64 79 aa11.21□□□□□ -0.61
VARS2-204ENST00000467717 LRP1BQ9NZR2 4599 aa11.2□□□□□ -0.62
VARS2-204ENST00000467717 IGLV5-45A0A087WSX0 123 aa11.2□□□□□ -0.62
VARS2-204ENST00000467717 A0A1B0GVY2 172 aa11.2□□□□□ -0.62
VARS2-204ENST00000467717 F8VRH5 84 aa11.2□□□□□ -0.62
VARS2-204ENST00000467717 ODF1Q14990 250 aa11.2□□□□□ -0.62
VARS2-204ENST00000467717 MRPL35Q9NZE8 188 aaKnown RBP11.2□□□□□ -0.62
VARS2-204ENST00000467717 GVQW2A0A096LPI5 108 aaPredicted RBP11.19□□□□□ -0.62
VARS2-204ENST00000467717 hDV102S1A0JD36 115 aa11.19□□□□□ -0.62
VARS2-204ENST00000467717 C5orf52A6NGY3 159 aa11.19□□□□□ -0.62
VARS2-204ENST00000467717 IGHV3-64A0A075B6Q5 118 aa11.18□□□□□ -0.62
VARS2-204ENST00000467717 C11orf86A6NJI1 115 aa11.18□□□□□ -0.62
VARS2-204ENST00000467717 H3BRM9 83 aa11.18□□□□□ -0.62
VARS2-204ENST00000467717 SYS1-DBNDD2H3BUS1 97 aa11.18□□□□□ -0.62
VARS2-204ENST00000467717 SPATA12Q7Z6I5 190 aa11.18□□□□□ -0.62
VARS2-204ENST00000467717 NTN5Q8WTR8 489 aaPredicted RBP11.18□□□□□ -0.62
VARS2-204ENST00000467717 HIST1H2BLQ99880 126 aa11.18□□□□□ -0.62
VARS2-204ENST00000467717 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.17□□□□□ -0.62
VARS2-204ENST00000467717 HIGD2BQ4VC39 106 aa11.17□□□□□ -0.62
VARS2-204ENST00000467717 OR10D4PQ8NGN7 298 aa11.17□□□□□ -0.62
VARS2-204ENST00000467717 PGPEP1Q9NXJ5 209 aa11.17□□□□□ -0.62
VARS2-204ENST00000467717 ZNF561-AS1K7EIQ3 104 aa11.16□□□□□ -0.62
VARS2-204ENST00000467717 ZNF22P17026 224 aaPredicted RBP11.16□□□□□ -0.62
VARS2-204ENST00000467717 KRTAP10-2P60368 255 aa11.16□□□□□ -0.62
VARS2-204ENST00000467717 PET117Q6UWS5 81 aa11.16□□□□□ -0.62
VARS2-204ENST00000467717 ORAOV1Q8WV07 137 aa11.16□□□□□ -0.62
VARS2-204ENST00000467717 C3orf79P0CE67 100 aa11.15□□□□□ -0.62
VARS2-204ENST00000467717 KRTDAPP60985 99 aa11.15□□□□□ -0.62
VARS2-204ENST00000467717 SPAG11BQ08648 103 aa11.15□□□□□ -0.62
VARS2-204ENST00000467717 CDPF1Q6NVV7 123 aa11.15□□□□□ -0.62
VARS2-204ENST00000467717 IGLV5-52A0A0A0MRZ9 124 aa11.14□□□□□ -0.63
VARS2-204ENST00000467717 PLNP26678 52 aa11.14□□□□□ -0.63
VARS2-204ENST00000467717 TMEM170BQ5T4T1 132 aa11.14□□□□□ -0.63
VARS2-204ENST00000467717 PMCHL2Q9BQD1 86 aa11.14□□□□□ -0.63
VARS2-204ENST00000467717 TMA7Q9Y2S6 64 aaKnown RBP11.14□□□□□ -0.63
VARS2-204ENST00000467717 DNAH8Q96JB1 4490 aa11.13□□□□□ -0.63
VARS2-204ENST00000467717 SMIM1B2RUZ4 78 aa11.13□□□□□ -0.63
VARS2-204ENST00000467717 DPM2O94777 84 aa11.13□□□□□ -0.63
VARS2-204ENST00000467717 SPINK8P0C7L1 97 aa11.13□□□□□ -0.63
VARS2-204ENST00000467717 CNBPP62633 177 aaKnown RBP11.13□□□□□ -0.63
VARS2-204ENST00000467717 LINC00526Q96FQ7 95 aa11.13□□□□□ -0.63
VARS2-204ENST00000467717 FUSP35637 526 aaKnown RBP eCLIP11.12□□□□□ -0.63
VARS2-204ENST00000467717 LINC01545Q5VT33 79 aa11.12□□□□□ -0.63
VARS2-204ENST00000467717 C2orf48Q96LS8 159 aa11.12□□□□□ -0.63
VARS2-204ENST00000467717 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.11□□□□□ -0.63
VARS2-204ENST00000467717 IGKCP01834 107 aa11.11□□□□□ -0.63
VARS2-204ENST00000467717 SLPIP03973 132 aa11.11□□□□□ -0.63
VARS2-204ENST00000467717 KIAA0087Q14695 138 aa11.11□□□□□ -0.63
VARS2-204ENST00000467717 C20orf202A1L168 122 aa11.1□□□□□ -0.63
VARS2-204ENST00000467717 PRSS2P07478 247 aa11.1□□□□□ -0.63
VARS2-204ENST00000467717 Q8IZM0 81 aa11.1□□□□□ -0.63
VARS2-204ENST00000467717 TOMM7Q9P0U1 55 aa11.1□□□□□ -0.63
VARS2-204ENST00000467717 IGLV5-39A0A0G2JS06 123 aa11.09□□□□□ -0.63
VARS2-204ENST00000467717 TMEM223A0PJW6 202 aa11.09□□□□□ -0.63
VARS2-204ENST00000467717 F8WDY8 70 aa11.09□□□□□ -0.63
VARS2-204ENST00000467717 C6orf226Q5I0X4 101 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms