RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 Q6ZUT4 128 aa5.76□□□□□ -1.49
HDAC3-203ENST00000467533 SMIM15Q7Z3B0 74 aa5.76□□□□□ -1.49
HDAC3-203ENST00000467533 RNASE7Q9H1E1 156 aaKnown RBP5.76□□□□□ -1.49
HDAC3-203ENST00000467533 UBE2D4Q9Y2X8 147 aa5.76□□□□□ -1.49
HDAC3-203ENST00000467533 RPL35P42766 123 aaKnown RBP5.75□□□□□ -1.49
HDAC3-203ENST00000467533 UBE2AP49459 152 aa5.75□□□□□ -1.49
HDAC3-203ENST00000467533 SMAGPQ0VAQ4 97 aa5.75□□□□□ -1.49
HDAC3-203ENST00000467533 FAM210AQ96ND0 272 aa5.75□□□□□ -1.49
HDAC3-203ENST00000467533 ST20Q9HBF5 79 aa5.75□□□□□ -1.49
HDAC3-203ENST00000467533 TRBV6-5A0A0K0K1A5 114 aa5.74□□□□□ -1.49
HDAC3-203ENST00000467533 TRBV30A0A0K0K1B3 111 aa5.74□□□□□ -1.49
HDAC3-203ENST00000467533 CENPWQ5EE01 88 aa5.74□□□□□ -1.49
HDAC3-203ENST00000467533 PACRGQ96M98 296 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-203ENST00000467533 CSDC2Q9Y534 153 aaKnown RBP5.74□□□□□ -1.49
HDAC3-203ENST00000467533 A0A1B0GV50 99 aa5.73□□□□□ -1.49
HDAC3-203ENST00000467533 FCER1GP30273 86 aa5.73□□□□□ -1.49
HDAC3-203ENST00000467533 FOXA3P55318 350 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-203ENST00000467533 IFITM2Q01629 132 aa5.73□□□□□ -1.49
HDAC3-203ENST00000467533 SPAG11AQ6PDA7 123 aa5.73□□□□□ -1.49
HDAC3-203ENST00000467533 ALKAL2Q6UX46 152 aa5.73□□□□□ -1.49
HDAC3-203ENST00000467533 MRPL55Q7Z7F7 128 aaKnown RBP5.73□□□□□ -1.49
HDAC3-203ENST00000467533 C3orf22Q8N5N4 141 aa5.73□□□□□ -1.49
HDAC3-203ENST00000467533 LINC00469Q8N7U9 141 aa5.73□□□□□ -1.49
HDAC3-203ENST00000467533 CNFNQ9BYD5 112 aa5.73□□□□□ -1.49
HDAC3-203ENST00000467533 C2orf82Q6UX34 121 aa5.72□□□□□ -1.49
HDAC3-203ENST00000467533 DAND5Q8N907 189 aa5.72□□□□□ -1.49
HDAC3-203ENST00000467533 IGHV3OR16-9A0A0B4J2B5 98 aa5.71□□□□□ -1.5
HDAC3-203ENST00000467533 RAB19A4D1S5 217 aa5.71□□□□□ -1.5
HDAC3-203ENST00000467533 RPL37AP8A6NKH3 93 aa5.71□□□□□ -1.5
HDAC3-203ENST00000467533 BLOC1S1P78537 153 aa5.71□□□□□ -1.5
HDAC3-203ENST00000467533 C4orf48Q5BLP8 95 aa5.71□□□□□ -1.5
HDAC3-203ENST00000467533 MBD3L1Q8WWY6 194 aa5.71□□□□□ -1.5
HDAC3-203ENST00000467533 XAGE1AQ9HD64 81 aa5.71□□□□□ -1.5
HDAC3-203ENST00000467533 TRBV27A0A0K0K1C4 114 aa5.7□□□□□ -1.5
HDAC3-203ENST00000467533 H2AFB1P0C5Y9 115 aa5.7□□□□□ -1.5
HDAC3-203ENST00000467533 RAB14P61106 215 aa5.7□□□□□ -1.5
HDAC3-203ENST00000467533 KIAA0087Q14695 138 aa5.7□□□□□ -1.5
HDAC3-203ENST00000467533 XP32Q5T750 250 aa5.7□□□□□ -1.5
HDAC3-203ENST00000467533 KRTAP13-1Q8IUC0 172 aa5.7□□□□□ -1.5
HDAC3-203ENST00000467533 FAM213BQ8TBF2 198 aa5.7□□□□□ -1.5
HDAC3-203ENST00000467533 TP73-AS1Q9UF72 201 aa5.7□□□□□ -1.5
HDAC3-203ENST00000467533 TGIF2-C20orf24A0A0A6YYL0 155 aa5.69□□□□□ -1.5
HDAC3-203ENST00000467533 ZNF727A8MUV8 499 aa5.69□□□□□ -1.5
HDAC3-203ENST00000467533 TEX46H3BTG2 121 aa5.69□□□□□ -1.5
HDAC3-203ENST00000467533 TNFRSF6BO95407 300 aa5.69□□□□□ -1.5
HDAC3-203ENST00000467533 GNG4P50150 75 aa5.69□□□□□ -1.5
HDAC3-203ENST00000467533 POLR2KP53803 58 aaKnown RBP5.69□□□□□ -1.5
HDAC3-203ENST00000467533 SFT2D1Q8WV19 159 aa5.69□□□□□ -1.5
HDAC3-203ENST00000467533 NDUFA12Q9UI09 145 aa5.69□□□□□ -1.5
HDAC3-203ENST00000467533 GAGE10A6NGK3 116 aa5.68□□□□□ -1.5
HDAC3-203ENST00000467533 CLLU1Q5K131 121 aa5.68□□□□□ -1.5
HDAC3-203ENST00000467533 C11orf52Q96A22 123 aa5.68□□□□□ -1.5
HDAC3-203ENST00000467533 TMEM18Q96B42 140 aa5.68□□□□□ -1.5
HDAC3-203ENST00000467533 SMIM12Q96EX1 92 aa5.68□□□□□ -1.5
HDAC3-203ENST00000467533 LINC00167Q96N53 147 aa5.68□□□□□ -1.5
HDAC3-203ENST00000467533 IGLV8-61A0A075B6I0 122 aa5.67□□□□□ -1.5
HDAC3-203ENST00000467533 IFITM10A6NMD0 228 aa5.67□□□□□ -1.5
HDAC3-203ENST00000467533 TIMM21Q9BVV7 248 aa5.67□□□□□ -1.5
HDAC3-203ENST00000467533 BIN3Q9NQY0 253 aa5.67□□□□□ -1.5
HDAC3-203ENST00000467533 VCYO14598 125 aa5.66□□□□□ -1.5
HDAC3-203ENST00000467533 CCL20P78556 96 aa5.66□□□□□ -1.5
HDAC3-203ENST00000467533 PRLHP81277 87 aa5.66□□□□□ -1.5
HDAC3-203ENST00000467533 NUDT10Q8NFP7 164 aa5.66□□□□□ -1.5
HDAC3-203ENST00000467533 NUDT11Q96G61 164 aa5.66□□□□□ -1.5
HDAC3-203ENST00000467533 KIR2DL4Q99706 377 aa5.66□□□□□ -1.5
HDAC3-203ENST00000467533 TAGLN2P37802 199 aaKnown RBP5.65□□□□□ -1.5
HDAC3-203ENST00000467533 HBBP68871 147 aa5.65□□□□□ -1.5
HDAC3-203ENST00000467533 PNRC1Q12796 327 aaPredicted RBP5.65□□□□□ -1.5
HDAC3-203ENST00000467533 MED9Q9NWA0 146 aa5.65□□□□□ -1.5
HDAC3-203ENST00000467533 PRSS2P07478 247 aa5.64□□□□□ -1.51
HDAC3-203ENST00000467533 CKS1BP61024 79 aa5.64□□□□□ -1.51
HDAC3-203ENST00000467533 RPL32P62910 135 aaKnown RBP5.64□□□□□ -1.51
HDAC3-203ENST00000467533 PCOTHQ58A44 107 aa5.64□□□□□ -1.51
HDAC3-203ENST00000467533 COX6B2Q6YFQ2 88 aa5.64□□□□□ -1.51
HDAC3-203ENST00000467533 MANBALQ9NQG1 85 aa5.64□□□□□ -1.51
HDAC3-203ENST00000467533 SSPOA2VEC9 5147 aa5.64□□□□□ -1.51
HDAC3-203ENST00000467533 TRBV20OR9-2A0A075B6H5 130 aa5.63□□□□□ -1.51
HDAC3-203ENST00000467533 LINC00862A6NCI5 91 aa5.63□□□□□ -1.51
HDAC3-203ENST00000467533 RPL39P62891 51 aaKnown RBP5.63□□□□□ -1.51
HDAC3-203ENST00000467533 FAM19A2Q8N3H0 131 aa5.63□□□□□ -1.51
HDAC3-203ENST00000467533 Q8NBF4 154 aa5.63□□□□□ -1.51
HDAC3-203ENST00000467533 TOMM7Q9P0U1 55 aa5.63□□□□□ -1.51
HDAC3-203ENST00000467533 GNG13Q9P2W3 67 aa5.63□□□□□ -1.51
HDAC3-203ENST00000467533 IGKV2-28A0A075B6P5 120 aa5.62□□□□□ -1.51
HDAC3-203ENST00000467533 SMKR1H3BMG3 65 aa5.62□□□□□ -1.51
HDAC3-203ENST00000467533 IGKV2D-28P01615 120 aa5.62□□□□□ -1.51
HDAC3-203ENST00000467533 SUMO2P61956 95 aaKnown RBP5.62□□□□□ -1.51
HDAC3-203ENST00000467533 FAM19A1Q7Z5A9 133 aa5.62□□□□□ -1.51
HDAC3-203ENST00000467533 NKAPP1Q8N9T2 125 aa5.62□□□□□ -1.51
HDAC3-203ENST00000467533 BORCS7Q96B45 105 aa5.62□□□□□ -1.51
HDAC3-203ENST00000467533 EIF5A2Q9GZV4 153 aaKnown RBP5.62□□□□□ -1.51
HDAC3-203ENST00000467533 USH2AO75445 5202 aa5.61□□□□□ -1.51
HDAC3-203ENST00000467533 FCGBPQ9Y6R7 5405 aaPredicted RBP5.61□□□□□ -1.51
HDAC3-203ENST00000467533 PDE6DO43924 150 aa5.61□□□□□ -1.51
HDAC3-203ENST00000467533 SPINK1P00995 79 aa5.61□□□□□ -1.51
HDAC3-203ENST00000467533 PEA15Q15121 130 aa5.61□□□□□ -1.51
HDAC3-203ENST00000467533 NDUFA5Q16718 116 aa5.61□□□□□ -1.51
HDAC3-203ENST00000467533 FAM104AQ969W3 186 aa5.61□□□□□ -1.51
HDAC3-203ENST00000467533 PLEKHB2Q96CS7 222 aa5.61□□□□□ -1.51
HDAC3-203ENST00000467533 SPANXA1Q9NS26 97 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms