RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PPP1R1AQ13522 171 aa1.41□□□□□ -2.18
XRN1-206ENST00000467077 TMEM128Q5BJH2 165 aa1.41□□□□□ -2.18
XRN1-206ENST00000467077 TMEM14EPQ6UXP3 125 aa1.41□□□□□ -2.18
XRN1-206ENST00000467077 GOLT1AQ6ZVE7 132 aa1.41□□□□□ -2.18
XRN1-206ENST00000467077 MIR17HGQ75NE6 70 aa1.41□□□□□ -2.18
XRN1-206ENST00000467077 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.41□□□□□ -2.18
XRN1-206ENST00000467077 SMIM4Q8WVI0 70 aa1.41□□□□□ -2.18
XRN1-206ENST00000467077 GGACTQ9BVM4 153 aa1.41□□□□□ -2.18
XRN1-206ENST00000467077 GSKIPQ9P0R6 139 aa1.41□□□□□ -2.18
XRN1-206ENST00000467077 LENEPQ9Y5L5 61 aa1.41□□□□□ -2.18
XRN1-206ENST00000467077 R4GN34 69 aa1.41□□□□□ -2.18
XRN1-206ENST00000467077 TRAV1-1A0A0B4J248 108 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 LOC389332A0A1B0GUA5 103 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 FAM24AA6NFZ4 105 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 CST7O76096 145 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 RNASE3P12724 160 aaKnown RBP1.4□□□□□ -2.19
XRN1-206ENST00000467077 FGF7P21781 194 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 ZNF80P51504 273 aaPredicted RBP1.4□□□□□ -2.19
XRN1-206ENST00000467077 TAS2R30P59541 319 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 UBE2D3P61077 147 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 PKIAP61925 76 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 UBE2D2P62837 147 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 UBE2L3P68036 154 aaKnown RBP1.4□□□□□ -2.19
XRN1-206ENST00000467077 IAH1Q2TAA2 248 aaPredicted RBP1.4□□□□□ -2.19
XRN1-206ENST00000467077 C1orf137Q5JT78 98 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 FAM74A1Q5RGS3 127 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 KRTAP26-1Q6PEX3 210 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 FER1L6-AS1Q8NA97 138 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 MCFD2Q8NI22 146 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 CMTM2Q8TAZ6 248 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 DIRC1Q969H9 104 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 PTH2Q96A98 100 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 DIRAS2Q96HU8 199 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 FAM167A-AS1Q96KT0 104 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 Q9H521 79 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 VCX3AQ9NNX9 186 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 UQCC1Q9NVA1 299 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 LINC00474Q9P2X8 69 aa1.4□□□□□ -2.19
XRN1-206ENST00000467077 ZNF706Q9Y5V0 76 aaPredicted RBP1.4□□□□□ -2.19
XRN1-206ENST00000467077 TRBV10-1A0A0K0K1A3 114 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 C9orf170A2RU37 121 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 H3BQ85 93 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 M0R381 172 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 GZMBP10144 247 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 LGALS3P17931 250 aaKnown RBP1.39□□□□□ -2.19
XRN1-206ENST00000467077 S100A11P31949 105 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 FAUP35544 74 aaKnown RBP1.39□□□□□ -2.19
XRN1-206ENST00000467077 RAB2AP61019 212 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 GNG5P63218 68 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 HBG1P69891 147 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 HBG2P69892 147 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 KHDC3LQ587J8 217 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 PDZD11Q5EBL8 140 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 FAM19A1Q7Z5A9 133 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 SUN5Q8TC36 379 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 SLC25A21Q9BQT8 299 aaPredicted RBP1.39□□□□□ -2.19
XRN1-206ENST00000467077 DERL1Q9BUN8 251 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 NPCDR1Q9BY65 106 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 MIXL1Q9H2W2 232 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 LYRM2Q9NU23 88 aaPredicted RBP1.39□□□□□ -2.19
XRN1-206ENST00000467077 OR5AC2Q9NZP5 309 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 RSL24D1Q9UHA3 163 aaKnown RBP1.39□□□□□ -2.19
XRN1-206ENST00000467077 PKIGQ9Y2B9 76 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 LSM5Q9Y4Y9 91 aaKnown RBP1.39□□□□□ -2.19
XRN1-206ENST00000467077 PHLDA3Q9Y5J5 127 aa1.39□□□□□ -2.19
XRN1-206ENST00000467077 TRBV25-1A0A075B6N4 114 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 IGHV1-24A0A0C4DH33 117 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 IGKV3OR2-268A0A0C4DH90 116 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 TRBV6-1A0A0K0K1D8 114 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 GRIFINA4D1Z8 144 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 FAM25EA8MYX2 175 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 B4DEV8 164 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 H3BVH4 76 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 UBE2L6O14933 153 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 ARMS2P0C7Q2 107 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 CRYGAP11844 174 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 TPT1P13693 172 aaKnown RBP1.38□□□□□ -2.19
XRN1-206ENST00000467077 PVALBP20472 110 aaPredicted RBP1.38□□□□□ -2.19
XRN1-206ENST00000467077 SULT1A1P50225 295 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 SULT1A2P50226 295 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 AP3S2P59780 193 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 RAB4BP61018 213 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 EIF5AP63241 154 aaKnown RBP1.38□□□□□ -2.19
XRN1-206ENST00000467077 ZNF56Q15929 161 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 TMEM241Q24JQ0 296 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 PYDC2Q56P42 97 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 TMEM97Q5BJF2 176 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 AMMECR1LQ6DCA0 310 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 PHF5AQ7RTV0 110 aaKnown RBP1.38□□□□□ -2.19
XRN1-206ENST00000467077 STX12Q86Y82 276 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 AMN1Q8IY45 258 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 TOMM5Q8N4H5 51 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 SFRP2Q96HF1 295 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 CARD19Q96LW7 228 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 OTORQ9NRC9 128 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 IL36BQ9NZH7 164 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 RBM12B-AS1Q9P1G2 102 aa1.38□□□□□ -2.19
XRN1-206ENST00000467077 A0A087WXM4 84 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 TMSB15BA0A087X1C1 80 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 GVQW2A0A096LPI5 108 aaPredicted RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms