RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 TOMM6Q96B49 74 aa4.51□□□□□ -1.69
UBXN4-205ENST00000467065 KRTAP1-5Q9BYS1 174 aa4.51□□□□□ -1.69
UBXN4-205ENST00000467065 Q9HAA7 133 aa4.51□□□□□ -1.69
UBXN4-205ENST00000467065 Q9UF83 564 aa4.51□□□□□ -1.69
UBXN4-205ENST00000467065 PYGO1Q9Y3Y4 419 aa4.51□□□□□ -1.69
UBXN4-205ENST00000467065 H0Y8G0 127 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 H3BRM9 83 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 HIST1H2BKO60814 126 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 SERF1AO75920 110 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 APOMO95445 188 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 HIST1H2BJP06899 126 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 HIST1H2BOP23527 126 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 HIST1H2BBP33778 126 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 HIST1H2BDP58876 126 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 HIST1H2BCP62807 126 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 HIST2H2BEQ16778 126 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.5□□□□□ -1.69
UBXN4-205ENST00000467065 NTM-AS1Q6ZSK4 140 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 C6orf223Q8N319 242 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 HIST1H2BHQ93079 126 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 PACRGQ96M98 296 aaPredicted RBP4.5□□□□□ -1.69
UBXN4-205ENST00000467065 TIMM17AQ99595 171 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 HIST1H2BNQ99877 126 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 HIST1H2BMQ99879 126 aa4.5□□□□□ -1.69
UBXN4-205ENST00000467065 PCLOQ9Y6V0 5065 aa4.49□□□□□ -1.69
UBXN4-205ENST00000467065 DNAH5Q8TE73 4624 aa4.49□□□□□ -1.69
UBXN4-205ENST00000467065 TRAV13-1A0A0B4J241 112 aa4.49□□□□□ -1.69
UBXN4-205ENST00000467065 IBA57-AS1B1ANH7 110 aa4.49□□□□□ -1.69
UBXN4-205ENST00000467065 LINC00694P0DN24 101 aa4.49□□□□□ -1.69
UBXN4-205ENST00000467065 ESDP10768 282 aa4.49□□□□□ -1.69
UBXN4-205ENST00000467065 MRPS36P82909 103 aaKnown RBP4.49□□□□□ -1.69
UBXN4-205ENST00000467065 PMVKQ15126 192 aa4.49□□□□□ -1.69
UBXN4-205ENST00000467065 C14orf177Q52M58 125 aa4.49□□□□□ -1.69
UBXN4-205ENST00000467065 MPV17L2Q567V2 206 aa4.49□□□□□ -1.69
UBXN4-205ENST00000467065 LINC00469Q8N7U9 141 aa4.49□□□□□ -1.69
UBXN4-205ENST00000467065 Q8N976 141 aa4.49□□□□□ -1.69
UBXN4-205ENST00000467065 IFI27L1Q96BM0 104 aa4.49□□□□□ -1.69
UBXN4-205ENST00000467065 CDC42SE2Q9NRR3 84 aa4.49□□□□□ -1.69
UBXN4-205ENST00000467065 LRP1BQ9NZR2 4599 aa4.49□□□□□ -1.69
UBXN4-205ENST00000467065 HSPG2P98160 4391 aa4.48□□□□□ -1.69
UBXN4-205ENST00000467065 PCP4L1A6NKN8 68 aa4.48□□□□□ -1.69
UBXN4-205ENST00000467065 PRSS2P07478 247 aa4.48□□□□□ -1.69
UBXN4-205ENST00000467065 RPL39P62891 51 aaKnown RBP4.48□□□□□ -1.69
UBXN4-205ENST00000467065 HERVK_113P63121 156 aa4.48□□□□□ -1.69
UBXN4-205ENST00000467065 PMCHL1Q16048 86 aa4.48□□□□□ -1.69
UBXN4-205ENST00000467065 FAM19A2Q8N3H0 131 aa4.48□□□□□ -1.69
UBXN4-205ENST00000467065 UBE2D4Q9Y2X8 147 aa4.48□□□□□ -1.69
UBXN4-205ENST00000467065 ABCA13Q86UQ4 5058 aa4.47□□□□□ -1.69
UBXN4-205ENST00000467065 APOBP04114 4563 aaKnown RBP4.47□□□□□ -1.69
UBXN4-205ENST00000467065 LINC01546A6NGU7 62 aa4.47□□□□□ -1.69
UBXN4-205ENST00000467065 C16orf90A8MZG2 172 aa4.47□□□□□ -1.69
UBXN4-205ENST00000467065 HSBP1L1C9JCN9 74 aa4.47□□□□□ -1.69
UBXN4-205ENST00000467065 TSTD3H0UI37 97 aa4.47□□□□□ -1.69
UBXN4-205ENST00000467065 ZNF561-AS1K7EIQ3 104 aa4.47□□□□□ -1.69
UBXN4-205ENST00000467065 XCL1P47992 114 aa4.47□□□□□ -1.69
UBXN4-205ENST00000467065 HERVK_113P61574 105 aa4.47□□□□□ -1.69
UBXN4-205ENST00000467065 PDZD11Q5EBL8 140 aa4.47□□□□□ -1.69
UBXN4-205ENST00000467065 CLPSL2Q6UWE3 100 aa4.47□□□□□ -1.69
UBXN4-205ENST00000467065 HIST3H2BBQ8N257 126 aa4.47□□□□□ -1.69
UBXN4-205ENST00000467065 CHTOPQ9Y3Y2 248 aaKnown RBP4.47□□□□□ -1.69
UBXN4-205ENST00000467065 IGLV4-60A0A075B6I1 120 aa4.46□□□□□ -1.7
UBXN4-205ENST00000467065 IGLV10-54A0A075B6I4 117 aa4.46□□□□□ -1.7
UBXN4-205ENST00000467065 LINC00959A0A1B0GUT2 108 aa4.46□□□□□ -1.7
UBXN4-205ENST00000467065 LINC00587B1AMM8 73 aa4.46□□□□□ -1.7
UBXN4-205ENST00000467065 COX7A2LO14548 114 aa4.46□□□□□ -1.7
UBXN4-205ENST00000467065 EIF4EBP3O60516 100 aaPredicted RBP4.46□□□□□ -1.7
UBXN4-205ENST00000467065 PLNP26678 52 aa4.46□□□□□ -1.7
UBXN4-205ENST00000467065 KRTDAPP60985 99 aa4.46□□□□□ -1.7
UBXN4-205ENST00000467065 JOSD1Q15040 202 aaPredicted RBP4.46□□□□□ -1.7
UBXN4-205ENST00000467065 CD164L2Q6UWJ8 174 aa4.46□□□□□ -1.7
UBXN4-205ENST00000467065 CST9LQ9H4G1 147 aa4.46□□□□□ -1.7
UBXN4-205ENST00000467065 PKIGQ9Y2B9 76 aa4.46□□□□□ -1.7
UBXN4-205ENST00000467065 IGLV4-3A0A075B6K6 122 aa4.45□□□□□ -1.7
UBXN4-205ENST00000467065 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.45□□□□□ -1.7
UBXN4-205ENST00000467065 GAGE12HA6NDE8 117 aa4.45□□□□□ -1.7
UBXN4-205ENST00000467065 IGIPA6NJ69 53 aa4.45□□□□□ -1.7
UBXN4-205ENST00000467065 CKS1BP61024 79 aa4.45□□□□□ -1.7
UBXN4-205ENST00000467065 RNASE13Q5GAN3 156 aaKnown RBP4.45□□□□□ -1.7
UBXN4-205ENST00000467065 C6orf226Q5I0X4 101 aa4.45□□□□□ -1.7
UBXN4-205ENST00000467065 PYY3Q5JQD4 70 aa4.45□□□□□ -1.7
UBXN4-205ENST00000467065 TMEM170BQ5T4T1 132 aa4.45□□□□□ -1.7
UBXN4-205ENST00000467065 SPATA12Q7Z6I5 190 aa4.45□□□□□ -1.7
UBXN4-205ENST00000467065 CHCHD10Q8WYQ3 142 aaPredicted RBP4.45□□□□□ -1.7
UBXN4-205ENST00000467065 TRAV12-1A0A0B4J245 112 aa4.44□□□□□ -1.7
UBXN4-205ENST00000467065 TINCRA0A1B0GVN0 87 aa4.44□□□□□ -1.7
UBXN4-205ENST00000467065 SCGB1D1O95968 90 aa4.44□□□□□ -1.7
UBXN4-205ENST00000467065 KRTAP10-2P60368 255 aa4.44□□□□□ -1.7
UBXN4-205ENST00000467065 PET117Q6UWS5 81 aa4.44□□□□□ -1.7
UBXN4-205ENST00000467065 Q6ZRN7 208 aaPredicted RBP4.44□□□□□ -1.7
UBXN4-205ENST00000467065 Q6ZUT4 128 aa4.44□□□□□ -1.7
UBXN4-205ENST00000467065 BAALCQ8WXS3 180 aa4.44□□□□□ -1.7
UBXN4-205ENST00000467065 DPH3Q96FX2 82 aa4.44□□□□□ -1.7
UBXN4-205ENST00000467065 OPRPNQ99935 248 aaPredicted RBP4.44□□□□□ -1.7
UBXN4-205ENST00000467065 PRR34Q9NV39 138 aa4.44□□□□□ -1.7
UBXN4-205ENST00000467065 IGHV1-58A0A0C4DH39 117 aa4.43□□□□□ -1.7
UBXN4-205ENST00000467065 DPM2O94777 84 aa4.43□□□□□ -1.7
UBXN4-205ENST00000467065 FUSP35637 526 aaKnown RBP eCLIP4.43□□□□□ -1.7
UBXN4-205ENST00000467065 SFTA2Q6UW10 78 aa4.43□□□□□ -1.7
UBXN4-205ENST00000467065 ENHOQ6UWT2 76 aa4.43□□□□□ -1.7
UBXN4-205ENST00000467065 HIST1H2BLQ99880 126 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms