RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 SDHAF1A6NFY7 115 aa3.34□□□□□ -1.87
CXXC4-202ENST00000466963 S100A8P05109 93 aa3.34□□□□□ -1.87
CXXC4-202ENST00000466963 FAM19A3Q7Z5A8 133 aa3.34□□□□□ -1.87
CXXC4-202ENST00000466963 IGKV2D-26A0A0A0MRZ7 120 aa3.34□□□□□ -1.88
CXXC4-202ENST00000466963 C5orf52A6NGY3 159 aa3.34□□□□□ -1.88
CXXC4-202ENST00000466963 A8MWL6 223 aa3.34□□□□□ -1.88
CXXC4-202ENST00000466963 POLR2KP53803 58 aaKnown RBP3.34□□□□□ -1.88
CXXC4-202ENST00000466963 PYGO1Q9Y3Y4 419 aa3.34□□□□□ -1.88
CXXC4-202ENST00000466963 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.33□□□□□ -1.88
CXXC4-202ENST00000466963 UPK1BO75841 260 aa3.33□□□□□ -1.88
CXXC4-202ENST00000466963 SPINK1P00995 79 aa3.33□□□□□ -1.88
CXXC4-202ENST00000466963 XCL1P47992 114 aa3.33□□□□□ -1.88
CXXC4-202ENST00000466963 H2BFSP57053 126 aa3.33□□□□□ -1.88
CXXC4-202ENST00000466963 HBBP68871 147 aa3.33□□□□□ -1.88
CXXC4-202ENST00000466963 PAPPA-AS1Q5QFB9 102 aa3.33□□□□□ -1.88
CXXC4-202ENST00000466963 CST9LP1Q5W188 147 aa3.33□□□□□ -1.88
CXXC4-202ENST00000466963 TMEM191AQ9H0A3 160 aa3.33□□□□□ -1.88
CXXC4-202ENST00000466963 PHF5AQ7RTV0 110 aaKnown RBP3.33□□□□□ -1.88
CXXC4-202ENST00000466963 GNG4P50150 75 aa3.33□□□□□ -1.88
CXXC4-202ENST00000466963 LYZL1Q6UWQ5 148 aa3.33□□□□□ -1.88
CXXC4-202ENST00000466963 TMUB2Q71RG4 321 aa3.33□□□□□ -1.88
CXXC4-202ENST00000466963 GATD1Q8NB37 220 aa3.33□□□□□ -1.88
CXXC4-202ENST00000466963 TMSB15BA0A087X1C1 80 aa3.32□□□□□ -1.88
CXXC4-202ENST00000466963 PPBPP02775 128 aa3.32□□□□□ -1.88
CXXC4-202ENST00000466963 FCER1GP30273 86 aa3.32□□□□□ -1.88
CXXC4-202ENST00000466963 LRRC37A5PQ49AS3 106 aa3.32□□□□□ -1.88
CXXC4-202ENST00000466963 SMIM3Q9BZL3 60 aa3.32□□□□□ -1.88
CXXC4-202ENST00000466963 ALG5Q9Y673 324 aa3.32□□□□□ -1.88
CXXC4-202ENST00000466963 CFC1P0CG37 223 aa3.31□□□□□ -1.88
CXXC4-202ENST00000466963 BCL2P10415 239 aa3.31□□□□□ -1.88
CXXC4-202ENST00000466963 ZNF726P1Q15940 193 aa3.31□□□□□ -1.88
CXXC4-202ENST00000466963 Q6ZN92 141 aa3.31□□□□□ -1.88
CXXC4-202ENST00000466963 Q8IZM0 81 aa3.31□□□□□ -1.88
CXXC4-202ENST00000466963 KCNRGQ8N5I3 272 aa3.31□□□□□ -1.88
CXXC4-202ENST00000466963 ORAOV1Q8WV07 137 aa3.31□□□□□ -1.88
CXXC4-202ENST00000466963 LAMTOR2Q9Y2Q5 125 aa3.31□□□□□ -1.88
CXXC4-202ENST00000466963 IGHV3OR16-9A0A0B4J2B5 98 aa3.31□□□□□ -1.88
CXXC4-202ENST00000466963 MUC21A0A0G2JKD1 596 aa3.31□□□□□ -1.88
CXXC4-202ENST00000466963 RPL35P42766 123 aaKnown RBP3.31□□□□□ -1.88
CXXC4-202ENST00000466963 TWIST1Q15672 202 aa3.31□□□□□ -1.88
CXXC4-202ENST00000466963 PPDPFQ9H3Y8 114 aa3.31□□□□□ -1.88
CXXC4-202ENST00000466963 UBE2D4Q9Y2X8 147 aa3.31□□□□□ -1.88
CXXC4-202ENST00000466963 RIGQ13278 110 aa3.3□□□□□ -1.88
CXXC4-202ENST00000466963 PAGE4O60829 102 aa3.3□□□□□ -1.88
CXXC4-202ENST00000466963 DAND5Q8N907 189 aa3.3□□□□□ -1.88
CXXC4-202ENST00000466963 SLC25A20O43772 301 aa3.3□□□□□ -1.88
CXXC4-202ENST00000466963 FA2HQ7L5A8 372 aa3.3□□□□□ -1.88
CXXC4-202ENST00000466963 AMN1Q8IY45 258 aa3.3□□□□□ -1.88
CXXC4-202ENST00000466963 C2orf88Q9BSF0 95 aa3.3□□□□□ -1.88
CXXC4-202ENST00000466963 TRBV24-1A0A075B6N3 115 aa3.29□□□□□ -1.88
CXXC4-202ENST00000466963 HMSDA8MTL9 139 aa3.29□□□□□ -1.88
CXXC4-202ENST00000466963 ZNF727A8MUV8 499 aa3.29□□□□□ -1.88
CXXC4-202ENST00000466963 TMEM250H0YL14 139 aa3.29□□□□□ -1.88
CXXC4-202ENST00000466963 PRSS2P07478 247 aa3.29□□□□□ -1.88
CXXC4-202ENST00000466963 KRTAP13-3Q3SY46 172 aa3.29□□□□□ -1.88
CXXC4-202ENST00000466963 SSBP3-AS1Q7Z2R9 100 aa3.29□□□□□ -1.88
CXXC4-202ENST00000466963 MRPL55Q7Z7F7 128 aaKnown RBP3.29□□□□□ -1.88
CXXC4-202ENST00000466963 KRTAP13-1Q8IUC0 172 aa3.29□□□□□ -1.88
CXXC4-202ENST00000466963 CTDSP1Q9GZU7 261 aa3.29□□□□□ -1.88
CXXC4-202ENST00000466963 SRSF3P84103 164 aaKnown RBP3.29□□□□□ -1.88
CXXC4-202ENST00000466963 CENPWQ5EE01 88 aa3.29□□□□□ -1.88
CXXC4-202ENST00000466963 ANAPC16Q96DE5 110 aa3.29□□□□□ -1.88
CXXC4-202ENST00000466963 PRSS47A8MTI9 375 aa3.28□□□□□ -1.88
CXXC4-202ENST00000466963 CBY1Q9Y3M2 126 aa3.28□□□□□ -1.88
CXXC4-202ENST00000466963 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.28□□□□□ -1.88
CXXC4-202ENST00000466963 A0A1B0GUT8 65 aa3.28□□□□□ -1.88
CXXC4-202ENST00000466963 IGKV2-29A2NJV5 120 aaPredicted RBP3.28□□□□□ -1.88
CXXC4-202ENST00000466963 SUMO2P61956 95 aaKnown RBP3.28□□□□□ -1.88
CXXC4-202ENST00000466963 C6orf48Q9UBA6 75 aa3.28□□□□□ -1.88
CXXC4-202ENST00000466963 RPL24P83731 157 aaKnown RBP3.28□□□□□ -1.88
CXXC4-202ENST00000466963 KRTAP19-1Q8IUB9 90 aa3.28□□□□□ -1.88
CXXC4-202ENST00000466963 C22orf24Q9Y442 160 aa3.28□□□□□ -1.88
CXXC4-202ENST00000466963 F8W036 122 aa3.27□□□□□ -1.89
CXXC4-202ENST00000466963 UBE2AP49459 152 aa3.27□□□□□ -1.89
CXXC4-202ENST00000466963 RPL7L1Q6DKI1 246 aaKnown RBP3.27□□□□□ -1.89
CXXC4-202ENST00000466963 TMEM242Q9NWH2 141 aa3.27□□□□□ -1.89
CXXC4-202ENST00000466963 GATCO43716 136 aaKnown RBP3.27□□□□□ -1.89
CXXC4-202ENST00000466963 IFI27P40305 119 aaPredicted RBP3.27□□□□□ -1.89
CXXC4-202ENST00000466963 HERVK_113P63121 156 aa3.27□□□□□ -1.89
CXXC4-202ENST00000466963 COX17Q14061 63 aa3.27□□□□□ -1.89
CXXC4-202ENST00000466963 KIAA0087Q14695 138 aa3.27□□□□□ -1.89
CXXC4-202ENST00000466963 FAM19A5Q7Z5A7 132 aaPredicted RBP3.27□□□□□ -1.89
CXXC4-202ENST00000466963 SFT2D1Q8WV19 159 aa3.27□□□□□ -1.89
CXXC4-202ENST00000466963 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
CXXC4-202ENST00000466963 IGKV3OR2-268A0A0C4DH90 116 aa3.26□□□□□ -1.89
CXXC4-202ENST00000466963 F8VRH5 84 aa3.26□□□□□ -1.89
CXXC4-202ENST00000466963 CKS1BP61024 79 aa3.26□□□□□ -1.89
CXXC4-202ENST00000466963 NUDT10Q8NFP7 164 aa3.26□□□□□ -1.89
CXXC4-202ENST00000466963 NUDT11Q96G61 164 aa3.26□□□□□ -1.89
CXXC4-202ENST00000466963 OSTCQ9NRP0 149 aa3.26□□□□□ -1.89
CXXC4-202ENST00000466963 S100A12P80511 92 aa3.26□□□□□ -1.89
CXXC4-202ENST00000466963 FAM74A3Q4VXF1 159 aa3.26□□□□□ -1.89
CXXC4-202ENST00000466963 PDZD11Q5EBL8 140 aa3.26□□□□□ -1.89
CXXC4-202ENST00000466963 NRACQ8N912 160 aa3.26□□□□□ -1.89
CXXC4-202ENST00000466963 KANTRA0A1W2PQU2 76 aa3.26□□□□□ -1.89
CXXC4-202ENST00000466963 IFITM10A6NMD0 228 aa3.25□□□□□ -1.89
CXXC4-202ENST00000466963 NKAPP1Q8N9T2 125 aa3.25□□□□□ -1.89
CXXC4-202ENST00000466963 RAB4AP20338 218 aa3.24□□□□□ -1.89
CXXC4-202ENST00000466963 LIMD2Q9BT23 127 aa3.24□□□□□ -1.89
CXXC4-202ENST00000466963 TPPP3Q9BW30 176 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms