RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 GNG11P61952 73 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 SELENOWP63302 87 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 SEC11AP67812 179 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 C9orf153Q5TBE3 101 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 C10orf113Q5VZT2 155 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 COMMD6Q7Z4G1 85 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 LSM10Q969L4 123 aaKnown RBP-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 LINC01600Q96MT4 127 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 LINC00472Q9H8W2 130 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 APLNQ9ULZ1 77 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 PCNX1Q96RV3 2341 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 NF1P21359 2839 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 NSD3Q9BZ95 1437 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 MYH8P13535 1937 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 TSC2P49815 1807 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 GNG7O60262 68 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 COX6CP09669 75 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 IGLC1P0CG04 106 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 SNCAP37840 140 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 ATP5EP56381 51 aaPredicted RBP-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 KRTAP19-8Q3LI54 63 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 C5orf38Q86SI9 138 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 FAM223AQ8IWN6 122 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 FAM167A-AS1Q96KT0 104 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 C12orf57Q99622 126 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 VAMP8Q9BV40 100 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 SPANXDQ9BXN6 97 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 LINC00470Q9BZP3 86 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 MANBALQ9NQG1 85 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 SBF2Q86WG5 1849 aa-0.31□□□□□ -2.46
CHMP2B-202ENST00000466696 MAP1AP78559 2803 aaPredicted RBP-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 FAT2Q9NYQ8 4349 aa-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 HERC1Q15751 4861 aa-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 RIMS1Q86UR5 1692 aaKnown RBP-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 UBE2L5PA0A1B0GUS4 154 aa-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 FAM24AA6NFZ4 105 aa-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 H0YGG7 62 aa-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 I3L3M4 83 aa-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 SNAPC5O75971 98 aa-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 AKAIN1P0CW23 69 aa-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 FGF7P21781 194 aa-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 UBE2L3P68036 154 aaKnown RBP-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 CRIPTQ9P021 101 aa-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 LAMC1P11047 1609 aa-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 RAPGEF6Q8TEU7 1601 aa-0.32□□□□□ -2.46
CHMP2B-202ENST00000466696 CEP152O94986 1710 aa-0.33□□□□□ -2.46
CHMP2B-202ENST00000466696 MAGI1Q96QZ7 1491 aaPredicted RBP-0.33□□□□□ -2.46
CHMP2B-202ENST00000466696 LINC00959A0A1B0GUT2 108 aa-0.33□□□□□ -2.46
CHMP2B-202ENST00000466696 NAP1L6A6NFF2 107 aa-0.33□□□□□ -2.46
CHMP2B-202ENST00000466696 SFTA2Q6UW10 78 aa-0.33□□□□□ -2.46
CHMP2B-202ENST00000466696 FAM107BQ9H098 131 aa-0.33□□□□□ -2.46
CHMP2B-202ENST00000466696 EPG5Q9HCE0 2579 aa-0.33□□□□□ -2.46
CHMP2B-202ENST00000466696 BICRAQ9NZM4 1560 aa-0.33□□□□□ -2.46
CHMP2B-202ENST00000466696 PLXNB2O15031 1838 aa-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 ZNF236Q9UL36 1845 aa-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 MXRA5Q9NR99 2828 aa-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 TRAV30A0A087WSZ9 112 aa-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 A0A1B0GU69 56 aa-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 CRYM-AS1A6NIL9 109 aa-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 SAA2P0DJI9 122 aaPredicted RBP-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 BTG2P78543 158 aa-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 DOPEY1Q5JWR5 2465 aa-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 HEPN1Q6WQI6 88 aa-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 SMG6Q86US8 1419 aaKnown RBP-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 SVBPQ8N300 66 aa-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 C1orf54Q8WWF1 131 aa-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 HMGXB3Q12766 1538 aa-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 LRP1BQ9NZR2 4599 aa-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 MYH6P13533 1939 aa-0.34□□□□□ -2.46
CHMP2B-202ENST00000466696 KIAA0556O60303 1618 aa-0.35□□□□□ -2.46
CHMP2B-202ENST00000466696 DOCK2Q92608 1830 aa-0.35□□□□□ -2.47
CHMP2B-202ENST00000466696 FAM223BA6NKX1 122 aa-0.35□□□□□ -2.47
CHMP2B-202ENST00000466696 SPRR2AP35326 72 aa-0.35□□□□□ -2.47
CHMP2B-202ENST00000466696 KRTDAPP60985 99 aa-0.35□□□□□ -2.47
CHMP2B-202ENST00000466696 GNGT1P63211 74 aa-0.35□□□□□ -2.47
CHMP2B-202ENST00000466696 Q0VG73 95 aa-0.35□□□□□ -2.47
CHMP2B-202ENST00000466696 CDC42SE2Q9NRR3 84 aa-0.35□□□□□ -2.47
CHMP2B-202ENST00000466696 PRO1854Q9UHT4 67 aa-0.35□□□□□ -2.47
CHMP2B-202ENST00000466696 KDM5AP29375 1690 aaKnown RBP-0.35□□□□□ -2.47
CHMP2B-202ENST00000466696 TULP4Q9NRJ4 1543 aa-0.35□□□□□ -2.47
CHMP2B-202ENST00000466696 SPG11Q96JI7 2443 aa-0.35□□□□□ -2.47
CHMP2B-202ENST00000466696 TGP01266 2768 aa-0.35□□□□□ -2.47
CHMP2B-202ENST00000466696 C1orf167Q5SNV9 1468 aa-0.35□□□□□ -2.47
CHMP2B-202ENST00000466696 EHBP1L1Q8N3D4 1523 aa-0.36□□□□□ -2.47
CHMP2B-202ENST00000466696 PKHD1P08F94 4074 aa-0.36□□□□□ -2.47
CHMP2B-202ENST00000466696 LOC100130705A0A1B0GUX0 176 aa-0.36□□□□□ -2.47
CHMP2B-202ENST00000466696 H3BQF6 201 aa-0.36□□□□□ -2.47
CHMP2B-202ENST00000466696 CCL22O00626 93 aa-0.36□□□□□ -2.47
CHMP2B-202ENST00000466696 UBE2D3P61077 147 aa-0.36□□□□□ -2.47
CHMP2B-202ENST00000466696 UBE2D2P62837 147 aa-0.36□□□□□ -2.47
CHMP2B-202ENST00000466696 DEFB112Q30KQ8 113 aa-0.36□□□□□ -2.47
CHMP2B-202ENST00000466696 C9orf62Q8N4C0 152 aa-0.36□□□□□ -2.47
CHMP2B-202ENST00000466696 SPRR4Q96PI1 79 aa-0.36□□□□□ -2.47
CHMP2B-202ENST00000466696 PSENENQ9NZ42 101 aa-0.36□□□□□ -2.47
CHMP2B-202ENST00000466696 KMT2CQ8NEZ4 4911 aaKnown RBP-0.36□□□□□ -2.47
CHMP2B-202ENST00000466696 MYOM1P52179 1685 aa-0.37□□□□□ -2.47
CHMP2B-202ENST00000466696 OOSP1A8MZH6 123 aa-0.37□□□□□ -2.47
CHMP2B-202ENST00000466696 H1FX-AS1Q4G0G2 97 aa-0.37□□□□□ -2.47
CHMP2B-202ENST00000466696 C6orf201Q7Z4U5 140 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms