RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 SCO1O75880 301 aa7.77□□□□□ -1.17
SHROOM3-202ENST00000466541 LINC00614P0C842 121 aa7.77□□□□□ -1.17
SHROOM3-202ENST00000466541 CNBPP62633 177 aaKnown RBP7.77□□□□□ -1.17
SHROOM3-202ENST00000466541 COX6A2Q02221 97 aa7.77□□□□□ -1.17
SHROOM3-202ENST00000466541 LINC00173Q6ZV60 143 aa7.77□□□□□ -1.17
SHROOM3-202ENST00000466541 IGLV4-69A0A075B6H9 119 aa7.76□□□□□ -1.17
SHROOM3-202ENST00000466541 LINC01546A6NGU7 62 aa7.76□□□□□ -1.17
SHROOM3-202ENST00000466541 APOMO95445 188 aa7.76□□□□□ -1.17
SHROOM3-202ENST00000466541 UBE2D1P51668 147 aa7.76□□□□□ -1.17
SHROOM3-202ENST00000466541 NDUFA6P56556 154 aa7.76□□□□□ -1.17
SHROOM3-202ENST00000466541 PAPPA-AS1Q5QFB9 102 aa7.76□□□□□ -1.17
SHROOM3-202ENST00000466541 LINC00242Q5T6M2 205 aa7.76□□□□□ -1.17
SHROOM3-202ENST00000466541 ERASQ7Z444 233 aa7.76□□□□□ -1.17
SHROOM3-202ENST00000466541 ORAOV1Q8WV07 137 aa7.76□□□□□ -1.17
SHROOM3-202ENST00000466541 URB1-AS1Q96HZ7 61 aa7.76□□□□□ -1.17
SHROOM3-202ENST00000466541 AMELXQ99217 191 aa7.76□□□□□ -1.17
SHROOM3-202ENST00000466541 TIMM17AQ99595 171 aa7.76□□□□□ -1.17
SHROOM3-202ENST00000466541 HSPG2P98160 4391 aa7.76□□□□□ -1.17
SHROOM3-202ENST00000466541 IGHV3OR16-9A0A0B4J2B5 98 aa7.75□□□□□ -1.17
SHROOM3-202ENST00000466541 TRGC2P03986 189 aa7.75□□□□□ -1.17
SHROOM3-202ENST00000466541 RAB5BP61020 215 aa7.75□□□□□ -1.17
SHROOM3-202ENST00000466541 SPAG11BQ08648 103 aa7.75□□□□□ -1.17
SHROOM3-202ENST00000466541 KRTAP4-5Q9BYR2 181 aa7.75□□□□□ -1.17
SHROOM3-202ENST00000466541 IGKV2-24A0A0C4DH68 120 aa7.74□□□□□ -1.17
SHROOM3-202ENST00000466541 A0A0J9YXV3 536 aa7.74□□□□□ -1.17
SHROOM3-202ENST00000466541 SYCNQ0VAF6 134 aa7.74□□□□□ -1.17
SHROOM3-202ENST00000466541 SDIM1Q6ZPB5 146 aa7.74□□□□□ -1.17
SHROOM3-202ENST00000466541 Q6ZSA8 131 aa7.74□□□□□ -1.17
SHROOM3-202ENST00000466541 SCXQ7RTU7 201 aa7.74□□□□□ -1.17
SHROOM3-202ENST00000466541 BAGE3Q86Y29 109 aa7.74□□□□□ -1.17
SHROOM3-202ENST00000466541 Q8N1X5 172 aa7.74□□□□□ -1.17
SHROOM3-202ENST00000466541 CARD19Q96LW7 228 aa7.74□□□□□ -1.17
SHROOM3-202ENST00000466541 CAMK2N2Q96S95 79 aa7.74□□□□□ -1.17
SHROOM3-202ENST00000466541 CHAC1Q9BUX1 264 aa7.74□□□□□ -1.17
SHROOM3-202ENST00000466541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.74□□□□□ -1.17
SHROOM3-202ENST00000466541 COLCA2A8K830 154 aa7.73□□□□□ -1.17
SHROOM3-202ENST00000466541 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.73□□□□□ -1.17
SHROOM3-202ENST00000466541 PANO1I0J062 215 aa7.73□□□□□ -1.17
SHROOM3-202ENST00000466541 HBDP02042 147 aa7.73□□□□□ -1.17
SHROOM3-202ENST00000466541 NPSP0C0P6 89 aa7.73□□□□□ -1.17
SHROOM3-202ENST00000466541 CHTF8P0CG12 524 aa7.73□□□□□ -1.17
SHROOM3-202ENST00000466541 GEMIN7Q9H840 131 aaKnown RBP7.73□□□□□ -1.17
SHROOM3-202ENST00000466541 EPM2AB3EWF7 344 aa7.72□□□□□ -1.17
SHROOM3-202ENST00000466541 Q6ZRU5 148 aa7.72□□□□□ -1.17
SHROOM3-202ENST00000466541 CIRBP-AS1Q8TBR5 109 aa7.72□□□□□ -1.17
SHROOM3-202ENST00000466541 CST9LQ9H4G1 147 aa7.72□□□□□ -1.17
SHROOM3-202ENST00000466541 DNAH8Q96JB1 4490 aa7.71□□□□□ -1.17
SHROOM3-202ENST00000466541 A0A087WZ39 114 aa7.71□□□□□ -1.18
SHROOM3-202ENST00000466541 A0A096LNJ9 63 aa7.71□□□□□ -1.18
SHROOM3-202ENST00000466541 LINC01549A6NIU2 74 aa7.71□□□□□ -1.18
SHROOM3-202ENST00000466541 PMVKQ15126 192 aa7.71□□□□□ -1.18
SHROOM3-202ENST00000466541 Q5VSD8 79 aa7.71□□□□□ -1.18
SHROOM3-202ENST00000466541 OR10D4PQ8NGN7 298 aa7.71□□□□□ -1.18
SHROOM3-202ENST00000466541 TOMM7Q9P0U1 55 aa7.71□□□□□ -1.18
SHROOM3-202ENST00000466541 SRRM2Q9UQ35 2752 aaKnown RBP7.7□□□□□ -1.18
SHROOM3-202ENST00000466541 FAM229AH3BQW9 127 aa7.7□□□□□ -1.18
SHROOM3-202ENST00000466541 HERVK_113P63121 156 aa7.7□□□□□ -1.18
SHROOM3-202ENST00000466541 SEC11AP67812 179 aa7.7□□□□□ -1.18
SHROOM3-202ENST00000466541 MAJINQ3KP22 176 aa7.7□□□□□ -1.18
SHROOM3-202ENST00000466541 LINC00469Q8N7U9 141 aa7.7□□□□□ -1.18
SHROOM3-202ENST00000466541 CDKN2A-AS1Q9UH64 79 aa7.7□□□□□ -1.18
SHROOM3-202ENST00000466541 PRSS2P07478 247 aa7.69□□□□□ -1.18
SHROOM3-202ENST00000466541 GAGE2BQ13066 116 aa7.69□□□□□ -1.18
SHROOM3-202ENST00000466541 UNQ6190/PRO20217Q6UXQ8 127 aa7.69□□□□□ -1.18
SHROOM3-202ENST00000466541 LINC00528Q8N1L1 170 aa7.69□□□□□ -1.18
SHROOM3-202ENST00000466541 FAM19A2Q8N3H0 131 aa7.69□□□□□ -1.18
SHROOM3-202ENST00000466541 CHCHD1Q96BP2 118 aaKnown RBP7.69□□□□□ -1.18
SHROOM3-202ENST00000466541 C2orf48Q96LS8 159 aa7.69□□□□□ -1.18
SHROOM3-202ENST00000466541 PACRGQ96M98 296 aaPredicted RBP7.69□□□□□ -1.18
SHROOM3-202ENST00000466541 A0A096LNI7 61 aa7.68□□□□□ -1.18
SHROOM3-202ENST00000466541 NDUFA1O15239 70 aa7.68□□□□□ -1.18
SHROOM3-202ENST00000466541 HSBP1O75506 76 aa7.68□□□□□ -1.18
SHROOM3-202ENST00000466541 RPL18AQ02543 176 aaKnown RBP7.68□□□□□ -1.18
SHROOM3-202ENST00000466541 PDZD11Q5EBL8 140 aa7.68□□□□□ -1.18
SHROOM3-202ENST00000466541 C10orf25Q5T742 122 aa7.68□□□□□ -1.18
SHROOM3-202ENST00000466541 C2orf82Q6UX34 121 aa7.68□□□□□ -1.18
SHROOM3-202ENST00000466541 ABCA13Q86UQ4 5058 aa7.67□□□□□ -1.18
SHROOM3-202ENST00000466541 PCLOQ9Y6V0 5065 aa7.67□□□□□ -1.18
SHROOM3-202ENST00000466541 TINCRA0A1B0GVN0 87 aa7.67□□□□□ -1.18
SHROOM3-202ENST00000466541 SERF1AO75920 110 aa7.67□□□□□ -1.18
SHROOM3-202ENST00000466541 ATP5LO75964 103 aa7.67□□□□□ -1.18
SHROOM3-202ENST00000466541 FAM19A3Q7Z5A8 133 aa7.67□□□□□ -1.18
SHROOM3-202ENST00000466541 SPACA4Q8TDM5 124 aa7.67□□□□□ -1.18
SHROOM3-202ENST00000466541 A0A087WYN8 130 aa7.66□□□□□ -1.18
SHROOM3-202ENST00000466541 LOC107984640A0A0U1RRK4 108 aa7.66□□□□□ -1.18
SHROOM3-202ENST00000466541 H0Y8G0 127 aa7.66□□□□□ -1.18
SHROOM3-202ENST00000466541 SPINK8P0C7L1 97 aa7.66□□□□□ -1.18
SHROOM3-202ENST00000466541 KIAA0087Q14695 138 aa7.66□□□□□ -1.18
SHROOM3-202ENST00000466541 C6orf226Q5I0X4 101 aa7.66□□□□□ -1.18
SHROOM3-202ENST00000466541 STPG4Q8N801 248 aa7.66□□□□□ -1.18
SHROOM3-202ENST00000466541 CKS1BP61024 79 aa7.65□□□□□ -1.18
SHROOM3-202ENST00000466541 LINC01561Q8N1V8 128 aa7.65□□□□□ -1.18
SHROOM3-202ENST00000466541 IFI27L1Q96BM0 104 aa7.65□□□□□ -1.18
SHROOM3-202ENST00000466541 NUPR1O60356 82 aa7.64□□□□□ -1.19
SHROOM3-202ENST00000466541 C9orf116Q5BN46 136 aaPredicted RBP7.64□□□□□ -1.19
SHROOM3-202ENST00000466541 MRPL35Q9NZE8 188 aaKnown RBP7.64□□□□□ -1.19
SHROOM3-202ENST00000466541 C6orf48Q9UBA6 75 aa7.64□□□□□ -1.19
SHROOM3-202ENST00000466541 PKIGQ9Y2B9 76 aa7.64□□□□□ -1.19
SHROOM3-202ENST00000466541 FAT1Q14517 4588 aa7.64□□□□□ -1.19
SHROOM3-202ENST00000466541 SMIM1B2RUZ4 78 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms