RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 RMI2Q96E14 147 aa7.4□□□□□ -1.22
VCP-204ENST00000466100 IGHV3OR16-9A0A0B4J2B5 98 aa7.39□□□□□ -1.23
VCP-204ENST00000466100 A0A0J9YXV3 536 aa7.39□□□□□ -1.23
VCP-204ENST00000466100 PRSS1P07477 247 aa7.39□□□□□ -1.23
VCP-204ENST00000466100 C3orf79P0CE67 100 aa7.39□□□□□ -1.23
VCP-204ENST00000466100 IGLC3P0DOY3 106 aa7.39□□□□□ -1.23
VCP-204ENST00000466100 XCL1P47992 114 aa7.39□□□□□ -1.23
VCP-204ENST00000466100 COX6A2Q02221 97 aa7.39□□□□□ -1.23
VCP-204ENST00000466100 CD164L2Q6UWJ8 174 aa7.39□□□□□ -1.23
VCP-204ENST00000466100 IGLV5-45A0A087WSX0 123 aa7.38□□□□□ -1.23
VCP-204ENST00000466100 TINCRA0A1B0GVN0 87 aa7.38□□□□□ -1.23
VCP-204ENST00000466100 GAGE12HA6NDE8 117 aa7.38□□□□□ -1.23
VCP-204ENST00000466100 SYS1-DBNDD2H3BUS1 97 aa7.38□□□□□ -1.23
VCP-204ENST00000466100 S100A2P29034 98 aa7.38□□□□□ -1.23
VCP-204ENST00000466100 TM2D2Q9BX73 214 aa7.38□□□□□ -1.23
VCP-204ENST00000466100 MAP1LC3CQ9BXW4 147 aa7.38□□□□□ -1.23
VCP-204ENST00000466100 COX11Q9Y6N1 276 aa7.38□□□□□ -1.23
VCP-204ENST00000466100 F8VRH5 84 aa7.37□□□□□ -1.23
VCP-204ENST00000466100 MRPL35Q9NZE8 188 aaKnown RBP7.37□□□□□ -1.23
VCP-204ENST00000466100 CHTOPQ9Y3Y2 248 aaKnown RBP7.37□□□□□ -1.23
VCP-204ENST00000466100 DYNC1H1Q14204 4646 aaKnown RBP7.37□□□□□ -1.23
VCP-204ENST00000466100 LRCOL1A6NCL2 159 aa7.36□□□□□ -1.23
VCP-204ENST00000466100 C11orf86A6NJI1 115 aa7.36□□□□□ -1.23
VCP-204ENST00000466100 H0Y8G0 127 aa7.36□□□□□ -1.23
VCP-204ENST00000466100 HERVK_113P63121 156 aa7.36□□□□□ -1.23
VCP-204ENST00000466100 SEC11AP67812 179 aa7.36□□□□□ -1.23
VCP-204ENST00000466100 WFDC2Q14508 124 aa7.36□□□□□ -1.23
VCP-204ENST00000466100 LINC01545Q5VT33 79 aa7.36□□□□□ -1.23
VCP-204ENST00000466100 PET117Q6UWS5 81 aa7.36□□□□□ -1.23
VCP-204ENST00000466100 CHAC1Q9BUX1 264 aa7.36□□□□□ -1.23
VCP-204ENST00000466100 A0A087WZ39 114 aa7.35□□□□□ -1.23
VCP-204ENST00000466100 ZNF22P17026 224 aaPredicted RBP7.35□□□□□ -1.23
VCP-204ENST00000466100 KRTDAPP60985 99 aa7.35□□□□□ -1.23
VCP-204ENST00000466100 C15orf56Q8N910 161 aa7.35□□□□□ -1.23
VCP-204ENST00000466100 CDKN2A-AS1Q9UH64 79 aa7.35□□□□□ -1.23
VCP-204ENST00000466100 DNAH8Q96JB1 4490 aa7.35□□□□□ -1.23
VCP-204ENST00000466100 COX7A2LO14548 114 aa7.34□□□□□ -1.23
VCP-204ENST00000466100 PSCAO43653 123 aa7.34□□□□□ -1.23
VCP-204ENST00000466100 C5orf38Q86SI9 138 aa7.34□□□□□ -1.23
VCP-204ENST00000466100 PMCHL2Q9BQD1 86 aa7.34□□□□□ -1.23
VCP-204ENST00000466100 GEMIN7Q9H840 131 aaKnown RBP7.34□□□□□ -1.23
VCP-204ENST00000466100 USP17L23D6RBM5 183 aa7.33□□□□□ -1.24
VCP-204ENST00000466100 DPM2O94777 84 aa7.33□□□□□ -1.24
VCP-204ENST00000466100 PLNP26678 52 aa7.33□□□□□ -1.24
VCP-204ENST00000466100 TNP2Q05952 138 aa7.33□□□□□ -1.24
VCP-204ENST00000466100 LINC01561Q8N1V8 128 aa7.33□□□□□ -1.24
VCP-204ENST00000466100 LINC00469Q8N7U9 141 aa7.33□□□□□ -1.24
VCP-204ENST00000466100 OR10D4PQ8NGN7 298 aa7.33□□□□□ -1.24
VCP-204ENST00000466100 LRP1BQ9NZR2 4599 aa7.33□□□□□ -1.24
VCP-204ENST00000466100 A0A087WTM6 91 aa7.32□□□□□ -1.24
VCP-204ENST00000466100 SMIM1B2RUZ4 78 aa7.32□□□□□ -1.24
VCP-204ENST00000466100 LECT2O14960 151 aa7.32□□□□□ -1.24
VCP-204ENST00000466100 IGHV3-64A0A075B6Q5 118 aa7.31□□□□□ -1.24
VCP-204ENST00000466100 GVQW2A0A096LPI5 108 aaPredicted RBP7.31□□□□□ -1.24
VCP-204ENST00000466100 IGHV1-58A0A0C4DH39 117 aa7.31□□□□□ -1.24
VCP-204ENST00000466100 IGLV5-39A0A0G2JS06 123 aa7.31□□□□□ -1.24
VCP-204ENST00000466100 IGKCP01834 107 aa7.31□□□□□ -1.24
VCP-204ENST00000466100 TMEM223A0PJW6 202 aa7.3□□□□□ -1.24
VCP-204ENST00000466100 LINC00336Q6ZUF6 198 aa7.3□□□□□ -1.24
VCP-204ENST00000466100 C20orf202A1L168 122 aa7.29□□□□□ -1.24
VCP-204ENST00000466100 H3BRM9 83 aa7.29□□□□□ -1.24
VCP-204ENST00000466100 APOMO95445 188 aa7.29□□□□□ -1.24
VCP-204ENST00000466100 SPINK8P0C7L1 97 aa7.29□□□□□ -1.24
VCP-204ENST00000466100 MALP21145 153 aa7.29□□□□□ -1.24
VCP-204ENST00000466100 KIAA0087Q14695 138 aa7.29□□□□□ -1.24
VCP-204ENST00000466100 TMEM170BQ5T4T1 132 aa7.29□□□□□ -1.24
VCP-204ENST00000466100 CFAP161Q6P656 301 aa7.29□□□□□ -1.24
VCP-204ENST00000466100 ORAOV1Q8WV07 137 aa7.29□□□□□ -1.24
VCP-204ENST00000466100 HIGD2BQ4VC39 106 aa7.28□□□□□ -1.24
VCP-204ENST00000466100 Q8N814 137 aa7.28□□□□□ -1.24
VCP-204ENST00000466100 EPPK1P58107 5090 aaKnown RBP7.28□□□□□ -1.24
VCP-204ENST00000466100 A0A1B0GVY2 172 aa7.27□□□□□ -1.25
VCP-204ENST00000466100 SLPIP03973 132 aa7.27□□□□□ -1.25
VCP-204ENST00000466100 SPAG11BQ08648 103 aa7.27□□□□□ -1.25
VCP-204ENST00000466100 C14orf177Q52M58 125 aa7.27□□□□□ -1.25
VCP-204ENST00000466100 NTN5Q8WTR8 489 aaPredicted RBP7.27□□□□□ -1.25
VCP-204ENST00000466100 LINC00526Q96FQ7 95 aa7.27□□□□□ -1.25
VCP-204ENST00000466100 APOBP04114 4563 aaKnown RBP7.26□□□□□ -1.25
VCP-204ENST00000466100 hDV102S1A0JD36 115 aa7.26□□□□□ -1.25
VCP-204ENST00000466100 AKR1D1P51857 326 aa7.26□□□□□ -1.25
VCP-204ENST00000466100 JOSD1Q15040 202 aaPredicted RBP7.26□□□□□ -1.25
VCP-204ENST00000466100 Q8IZM0 81 aa7.26□□□□□ -1.25
VCP-204ENST00000466100 ATOH7Q8N100 152 aa7.26□□□□□ -1.25
VCP-204ENST00000466100 TSPEAR-AS2P59090 65 aa7.25□□□□□ -1.25
VCP-204ENST00000466100 KRTAP10-2P60368 255 aa7.25□□□□□ -1.25
VCP-204ENST00000466100 CNBPP62633 177 aaKnown RBP7.25□□□□□ -1.25
VCP-204ENST00000466100 PYY3Q5JQD4 70 aa7.25□□□□□ -1.25
VCP-204ENST00000466100 COX7B2Q8TF08 81 aa7.25□□□□□ -1.25
VCP-204ENST00000466100 C2orf48Q96LS8 159 aa7.25□□□□□ -1.25
VCP-204ENST00000466100 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.24□□□□□ -1.25
VCP-204ENST00000466100 LOC105371267A0A1B0GV96 52 aa7.24□□□□□ -1.25
VCP-204ENST00000466100 E9PLD3 99 aa7.24□□□□□ -1.25
VCP-204ENST00000466100 ZNF561-AS1K7EIQ3 104 aa7.24□□□□□ -1.25
VCP-204ENST00000466100 SCGB1D1O95968 90 aa7.24□□□□□ -1.25
VCP-204ENST00000466100 STPG4Q8N801 248 aa7.24□□□□□ -1.25
VCP-204ENST00000466100 F8WDY8 70 aa7.23□□□□□ -1.25
VCP-204ENST00000466100 EREGO14944 169 aa7.23□□□□□ -1.25
VCP-204ENST00000466100 LEPROTO15243 131 aa7.23□□□□□ -1.25
VCP-204ENST00000466100 HERVK_113P61574 105 aa7.23□□□□□ -1.25
VCP-204ENST00000466100 MAJINQ3KP22 176 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms