RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ORMDL3Q8N138 153 aa12.78□□□□□ -0.36
PDLIM4-205ENST00000463615 LINC01600Q96MT4 127 aa12.78□□□□□ -0.36
PDLIM4-205ENST00000463615 TNXBP22105 4242 aa12.78□□□□□ -0.36
PDLIM4-205ENST00000463615 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.77□□□□□ -0.37
PDLIM4-205ENST00000463615 SPAG11BQ08648 103 aa12.76□□□□□ -0.37
PDLIM4-205ENST00000463615 PNRC1Q12796 327 aaPredicted RBP12.76□□□□□ -0.37
PDLIM4-205ENST00000463615 SPINK6Q6UWN8 80 aa12.76□□□□□ -0.37
PDLIM4-205ENST00000463615 Q6ZRP5 223 aa12.76□□□□□ -0.37
PDLIM4-205ENST00000463615 TMEM136Q6ZRR5 245 aa12.76□□□□□ -0.37
PDLIM4-205ENST00000463615 PYGO1Q9Y3Y4 419 aa12.76□□□□□ -0.37
PDLIM4-205ENST00000463615 GAGE2BQ13066 116 aa12.75□□□□□ -0.37
PDLIM4-205ENST00000463615 SRSF9Q13242 221 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDLIM4-205ENST00000463615 PRELID3AQ96N28 172 aa12.75□□□□□ -0.37
PDLIM4-205ENST00000463615 LAMTOR2Q9Y2Q5 125 aa12.75□□□□□ -0.37
PDLIM4-205ENST00000463615 OPRPNQ99935 248 aaPredicted RBP12.74□□□□□ -0.37
PDLIM4-205ENST00000463615 MRPL35Q9NZE8 188 aaKnown RBP12.74□□□□□ -0.37
PDLIM4-205ENST00000463615 A0A1W2PNN7 141 aa12.73□□□□□ -0.37
PDLIM4-205ENST00000463615 IFITM10A6NMD0 228 aa12.72□□□□□ -0.37
PDLIM4-205ENST00000463615 RAB5AP20339 215 aa12.72□□□□□ -0.37
PDLIM4-205ENST00000463615 ANAPC16Q96DE5 110 aa12.72□□□□□ -0.37
PDLIM4-205ENST00000463615 IFI27P40305 119 aaPredicted RBP12.71□□□□□ -0.37
PDLIM4-205ENST00000463615 ORAOV1Q8WV07 137 aa12.71□□□□□ -0.37
PDLIM4-205ENST00000463615 MT-ND4LP03901 98 aa12.7□□□□□ -0.38
PDLIM4-205ENST00000463615 C9orf116Q5BN46 136 aaPredicted RBP12.7□□□□□ -0.38
PDLIM4-205ENST00000463615 UBR4Q5T4S7 5183 aa12.7□□□□□ -0.38
PDLIM4-205ENST00000463615 IGLV4-3A0A075B6K6 122 aa12.69□□□□□ -0.38
PDLIM4-205ENST00000463615 A0A087WZ39 114 aa12.69□□□□□ -0.38
PDLIM4-205ENST00000463615 A0A0J9YXV3 536 aa12.69□□□□□ -0.38
PDLIM4-205ENST00000463615 TLX1NBP0CAT3 122 aa12.69□□□□□ -0.38
PDLIM4-205ENST00000463615 REG3GQ6UW15 175 aa12.69□□□□□ -0.38
PDLIM4-205ENST00000463615 IMMP2LQ96T52 175 aa12.69□□□□□ -0.38
PDLIM4-205ENST00000463615 NDUFA1O15239 70 aa12.68□□□□□ -0.38
PDLIM4-205ENST00000463615 RPL18AQ02543 176 aaKnown RBP12.68□□□□□ -0.38
PDLIM4-205ENST00000463615 LINC00242Q5T6M2 205 aa12.68□□□□□ -0.38
PDLIM4-205ENST00000463615 TGIF2-C20orf24A0A0A6YYL0 155 aa12.67□□□□□ -0.38
PDLIM4-205ENST00000463615 KRTAP10-8P60410 259 aa12.67□□□□□ -0.38
PDLIM4-205ENST00000463615 RAB14P61106 215 aa12.67□□□□□ -0.38
PDLIM4-205ENST00000463615 KIAA0087Q14695 138 aa12.67□□□□□ -0.38
PDLIM4-205ENST00000463615 TMEM141Q96I45 108 aa12.67□□□□□ -0.38
PDLIM4-205ENST00000463615 MAP1LC3AQ9H492 121 aa12.67□□□□□ -0.38
PDLIM4-205ENST00000463615 K7EMI3 77 aa12.66□□□□□ -0.38
PDLIM4-205ENST00000463615 NPSP0C0P6 89 aa12.66□□□□□ -0.38
PDLIM4-205ENST00000463615 LINC01561Q8N1V8 128 aa12.66□□□□□ -0.38
PDLIM4-205ENST00000463615 Q8N8P6 123 aa12.66□□□□□ -0.38
PDLIM4-205ENST00000463615 C10orf25Q5T742 122 aa12.65□□□□□ -0.38
PDLIM4-205ENST00000463615 UBE2D1P51668 147 aa12.64□□□□□ -0.39
PDLIM4-205ENST00000463615 C6orf48Q9UBA6 75 aa12.64□□□□□ -0.39
PDLIM4-205ENST00000463615 PSORS1C2Q9UIG4 136 aa12.64□□□□□ -0.39
PDLIM4-205ENST00000463615 C2orf66Q6UXQ4 117 aa12.63□□□□□ -0.39
PDLIM4-205ENST00000463615 UNQ6190/PRO20217Q6UXQ8 127 aa12.63□□□□□ -0.39
PDLIM4-205ENST00000463615 TEX43Q6ZNM6 134 aa12.63□□□□□ -0.39
PDLIM4-205ENST00000463615 AMELXQ99217 191 aa12.63□□□□□ -0.39
PDLIM4-205ENST00000463615 CYSLTR1Q9Y271 337 aa12.63□□□□□ -0.39
PDLIM4-205ENST00000463615 LOC389332A0A1B0GUA5 103 aa12.62□□□□□ -0.39
PDLIM4-205ENST00000463615 ORMDL2Q53FV1 153 aa12.62□□□□□ -0.39
PDLIM4-205ENST00000463615 CLLU1Q5K131 121 aa12.62□□□□□ -0.39
PDLIM4-205ENST00000463615 TRBV30A0A0K0K1B3 111 aa12.61□□□□□ -0.39
PDLIM4-205ENST00000463615 LINC00173Q6ZV60 143 aa12.61□□□□□ -0.39
PDLIM4-205ENST00000463615 PHF5AQ7RTV0 110 aaKnown RBP12.61□□□□□ -0.39
PDLIM4-205ENST00000463615 FAM19A3Q7Z5A8 133 aa12.61□□□□□ -0.39
PDLIM4-205ENST00000463615 MT-ND6P03923 174 aa12.6□□□□□ -0.39
PDLIM4-205ENST00000463615 C2orf88Q9BSF0 95 aa12.6□□□□□ -0.39
PDLIM4-205ENST00000463615 NXT2Q9NPJ8 142 aaKnown RBP12.6□□□□□ -0.39
PDLIM4-205ENST00000463615 IGIPA6NJ69 53 aa12.59□□□□□ -0.39
PDLIM4-205ENST00000463615 Q6ZN92 141 aa12.59□□□□□ -0.39
PDLIM4-205ENST00000463615 VCX2Q9H322 139 aa12.57□□□□□ -0.4
PDLIM4-205ENST00000463615 G0S2P27469 103 aa12.56□□□□□ -0.4
PDLIM4-205ENST00000463615 C1orf137Q5JT78 98 aa12.56□□□□□ -0.4
PDLIM4-205ENST00000463615 UQCC3Q6UW78 93 aa12.56□□□□□ -0.4
PDLIM4-205ENST00000463615 CTDSP1Q9GZU7 261 aa12.56□□□□□ -0.4
PDLIM4-205ENST00000463615 LRP2P98164 4655 aa12.55□□□□□ -0.4
PDLIM4-205ENST00000463615 TRAV9-1A0A075B6T8 112 aa12.55□□□□□ -0.4
PDLIM4-205ENST00000463615 FAM168BA1KXE4 195 aa12.55□□□□□ -0.4
PDLIM4-205ENST00000463615 NDUFC2-KCTD14E9PQ53 114 aa12.55□□□□□ -0.4
PDLIM4-205ENST00000463615 KRTAP7-1Q8IUC3 87 aa12.55□□□□□ -0.4
PDLIM4-205ENST00000463615 ADCYAP1P18509 176 aa12.54□□□□□ -0.4
PDLIM4-205ENST00000463615 GAGE2EQ4V326 116 aa12.54□□□□□ -0.4
PDLIM4-205ENST00000463615 PAPPA-AS1Q5QFB9 102 aa12.54□□□□□ -0.4
PDLIM4-205ENST00000463615 ZC2HC1BQ5TFG8 222 aa12.54□□□□□ -0.4
PDLIM4-205ENST00000463615 C2orf82Q6UX34 121 aa12.54□□□□□ -0.4
PDLIM4-205ENST00000463615 TIMM17AQ99595 171 aa12.54□□□□□ -0.4
PDLIM4-205ENST00000463615 GAGE2DQ9UEU5 116 aa12.54□□□□□ -0.4
PDLIM4-205ENST00000463615 IGLV7-43P04211 117 aa12.53□□□□□ -0.4
PDLIM4-205ENST00000463615 SEC11AP67812 179 aa12.53□□□□□ -0.4
PDLIM4-205ENST00000463615 PACRGQ96M98 296 aaPredicted RBP12.53□□□□□ -0.4
PDLIM4-205ENST00000463615 TMEM218A2RU14 115 aa12.52□□□□□ -0.41
PDLIM4-205ENST00000463615 ODF1Q14990 250 aa12.52□□□□□ -0.41
PDLIM4-205ENST00000463615 KRTAP11-1Q8IUC1 163 aa12.52□□□□□ -0.41
PDLIM4-205ENST00000463615 Q8IZM0 81 aa12.52□□□□□ -0.41
PDLIM4-205ENST00000463615 TOMM6Q96B49 74 aa12.52□□□□□ -0.41
PDLIM4-205ENST00000463615 HERVK_113P63121 156 aa12.51□□□□□ -0.41
PDLIM4-205ENST00000463615 C9orf129Q5T035 196 aaKnown RBP12.5□□□□□ -0.41
PDLIM4-205ENST00000463615 FAM19A5Q7Z5A7 132 aaPredicted RBP12.5□□□□□ -0.41
PDLIM4-205ENST00000463615 DIRC1Q969H9 104 aa12.5□□□□□ -0.41
PDLIM4-205ENST00000463615 LINC01546A6NGU7 62 aa12.48□□□□□ -0.41
PDLIM4-205ENST00000463615 LINC01549A6NIU2 74 aa12.48□□□□□ -0.41
PDLIM4-205ENST00000463615 M0QXV9 152 aa12.48□□□□□ -0.41
PDLIM4-205ENST00000463615 PRSS2P07478 247 aa12.48□□□□□ -0.41
PDLIM4-205ENST00000463615 ERASQ7Z444 233 aa12.48□□□□□ -0.41
PDLIM4-205ENST00000463615 CKS1BP61024 79 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms