RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 UFSP1Q6NVU6 142 aa10.17□□□□□ -0.78
SND1-203ENST00000463020 PRSS1P07477 247 aa10.16□□□□□ -0.78
SND1-203ENST00000463020 SUMO2P61956 95 aaKnown RBP10.16□□□□□ -0.78
SND1-203ENST00000463020 IGKV2D-24A0A075B6R9 120 aa10.15□□□□□ -0.78
SND1-203ENST00000463020 KLK12Q9UKR0 248 aa10.15□□□□□ -0.78
SND1-203ENST00000463020 LINC01549A6NIU2 74 aa10.14□□□□□ -0.79
SND1-203ENST00000463020 RPL37AP61513 92 aaKnown RBP10.14□□□□□ -0.79
SND1-203ENST00000463020 RPL32P62910 135 aaKnown RBP10.14□□□□□ -0.79
SND1-203ENST00000463020 PTH2Q96A98 100 aa10.14□□□□□ -0.79
SND1-203ENST00000463020 F5H697 171 aa10.13□□□□□ -0.79
SND1-203ENST00000463020 PANO1I0J062 215 aa10.13□□□□□ -0.79
SND1-203ENST00000463020 TCAPO15273 167 aa10.13□□□□□ -0.79
SND1-203ENST00000463020 CIDEAO60543 219 aa10.13□□□□□ -0.79
SND1-203ENST00000463020 COX8AP10176 69 aa10.13□□□□□ -0.79
SND1-203ENST00000463020 KIF25-AS1Q9Y6Z4 181 aa10.13□□□□□ -0.79
SND1-203ENST00000463020 UBE2WQ96B02 151 aa10.12□□□□□ -0.79
SND1-203ENST00000463020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.11□□□□□ -0.79
SND1-203ENST00000463020 DPM2O94777 84 aa10.11□□□□□ -0.79
SND1-203ENST00000463020 ZFP2Q6ZN57 461 aa10.11□□□□□ -0.79
SND1-203ENST00000463020 RPL39LQ96EH5 51 aaKnown RBP10.11□□□□□ -0.79
SND1-203ENST00000463020 SCGB3A1Q96QR1 104 aa10.11□□□□□ -0.79
SND1-203ENST00000463020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.11□□□□□ -0.79
SND1-203ENST00000463020 VCYO14598 125 aa10.1□□□□□ -0.79
SND1-203ENST00000463020 IGKCP01834 107 aa10.1□□□□□ -0.79
SND1-203ENST00000463020 HINT1P49773 126 aaPredicted RBP10.1□□□□□ -0.79
SND1-203ENST00000463020 ODF1Q14990 250 aa10.1□□□□□ -0.79
SND1-203ENST00000463020 SUMO4Q6EEV6 95 aa10.1□□□□□ -0.79
SND1-203ENST00000463020 TOMM6Q96B49 74 aa10.1□□□□□ -0.79
SND1-203ENST00000463020 COX11Q9Y6N1 276 aa10.1□□□□□ -0.79
SND1-203ENST00000463020 A0A087WX48 190 aa10.09□□□□□ -0.79
SND1-203ENST00000463020 TRAV12-1A0A0B4J245 112 aa10.09□□□□□ -0.79
SND1-203ENST00000463020 A0A087WWL8 130 aa10.08□□□□□ -0.8
SND1-203ENST00000463020 TRBV6-5A0A0K0K1A5 114 aa10.08□□□□□ -0.8
SND1-203ENST00000463020 H7C1H1 209 aa10.08□□□□□ -0.8
SND1-203ENST00000463020 DLEU1O43261 78 aa10.08□□□□□ -0.8
SND1-203ENST00000463020 PLNP26678 52 aa10.08□□□□□ -0.8
SND1-203ENST00000463020 ZNF56Q15929 161 aa10.08□□□□□ -0.8
SND1-203ENST00000463020 ANKRD39Q53RE8 183 aa10.08□□□□□ -0.8
SND1-203ENST00000463020 ENHOQ6UWT2 76 aa10.08□□□□□ -0.8
SND1-203ENST00000463020 RMI2Q96E14 147 aa10.08□□□□□ -0.8
SND1-203ENST00000463020 KIR2DL4Q99706 377 aa10.08□□□□□ -0.8
SND1-203ENST00000463020 A8MWV9 139 aa10.07□□□□□ -0.8
SND1-203ENST00000463020 PIK3CD-AS1Q5SR53 167 aa10.07□□□□□ -0.8
SND1-203ENST00000463020 FAM74A4Q5TZK3 123 aa10.07□□□□□ -0.8
SND1-203ENST00000463020 STPG4Q8N801 248 aa10.07□□□□□ -0.8
SND1-203ENST00000463020 CYSLTR1Q9Y271 337 aa10.07□□□□□ -0.8
SND1-203ENST00000463020 C2orf66Q6UXQ4 117 aa10.06□□□□□ -0.8
SND1-203ENST00000463020 LINC00469Q8N7U9 141 aa10.06□□□□□ -0.8
SND1-203ENST00000463020 USP17L23D6RBM5 183 aa10.05□□□□□ -0.8
SND1-203ENST00000463020 POLR2KP53803 58 aaKnown RBP10.05□□□□□ -0.8
SND1-203ENST00000463020 TMEM97Q5BJF2 176 aa10.05□□□□□ -0.8
SND1-203ENST00000463020 ERASQ7Z444 233 aa10.05□□□□□ -0.8
SND1-203ENST00000463020 BOD1L2Q8IYS8 172 aa10.05□□□□□ -0.8
SND1-203ENST00000463020 CHTOPQ9Y3Y2 248 aaKnown RBP10.05□□□□□ -0.8
SND1-203ENST00000463020 ZNF25P17030 456 aaPredicted RBP10.04□□□□□ -0.8
SND1-203ENST00000463020 NMUP48645 174 aa10.04□□□□□ -0.8
SND1-203ENST00000463020 TMEM141Q96I45 108 aa10.04□□□□□ -0.8
SND1-203ENST00000463020 MRPL35Q9NZE8 188 aaKnown RBP10.04□□□□□ -0.8
SND1-203ENST00000463020 TRBV27A0A0K0K1C4 114 aa10.03□□□□□ -0.8
SND1-203ENST00000463020 SDHAF1A6NFY7 115 aa10.03□□□□□ -0.8
SND1-203ENST00000463020 F8VRH5 84 aa10.03□□□□□ -0.8
SND1-203ENST00000463020 M0QY20 66 aa10.03□□□□□ -0.8
SND1-203ENST00000463020 FGF6P10767 208 aa10.03□□□□□ -0.8
SND1-203ENST00000463020 MPV17L2Q567V2 206 aa10.03□□□□□ -0.8
SND1-203ENST00000463020 BVES-AS1Q5T3Y7 98 aa10.03□□□□□ -0.8
SND1-203ENST00000463020 RHODO00212 210 aa10.02□□□□□ -0.81
SND1-203ENST00000463020 UBE2D3P61077 147 aa10.02□□□□□ -0.81
SND1-203ENST00000463020 UBE2D2P62837 147 aa10.02□□□□□ -0.81
SND1-203ENST00000463020 PAPPA-AS1Q5QFB9 102 aa10.02□□□□□ -0.81
SND1-203ENST00000463020 ZC2HC1BQ5TFG8 222 aa10.02□□□□□ -0.81
SND1-203ENST00000463020 KRTAP26-1Q6PEX3 210 aa10.02□□□□□ -0.81
SND1-203ENST00000463020 NEXN-AS1Q8NBZ9 246 aa10.02□□□□□ -0.81
SND1-203ENST00000463020 I3L3M4 83 aa10.01□□□□□ -0.81
SND1-203ENST00000463020 SEC11AP67812 179 aa10.01□□□□□ -0.81
SND1-203ENST00000463020 HSD52Q0P140 79 aa10.01□□□□□ -0.81
SND1-203ENST00000463020 C2orf91Q6ZV80 131 aa10.01□□□□□ -0.81
SND1-203ENST00000463020 ORAOV1Q8WV07 137 aa10.01□□□□□ -0.81
SND1-203ENST00000463020 C1orf43Q9BWL3 253 aa10.01□□□□□ -0.81
SND1-203ENST00000463020 SDIM1Q6ZPB5 146 aa10□□□□□ -0.81
SND1-203ENST00000463020 TIMM17AQ99595 171 aa10□□□□□ -0.81
SND1-203ENST00000463020 CHCHD7Q9BUK0 85 aa10□□□□□ -0.81
SND1-203ENST00000463020 A6NDN8 102 aa9.99□□□□□ -0.81
SND1-203ENST00000463020 PMVKQ15126 192 aa9.99□□□□□ -0.81
SND1-203ENST00000463020 C14orf177Q52M58 125 aa9.99□□□□□ -0.81
SND1-203ENST00000463020 CLPSL2Q6UWE3 100 aa9.99□□□□□ -0.81
SND1-203ENST00000463020 C9orf163Q8N9P6 203 aa9.99□□□□□ -0.81
SND1-203ENST00000463020 HIGD1BQ9P298 99 aa9.99□□□□□ -0.81
SND1-203ENST00000463020 TP73-AS1Q9UF72 201 aa9.99□□□□□ -0.81
SND1-203ENST00000463020 TMEM262E9PQX1 116 aa9.98□□□□□ -0.81
SND1-203ENST00000463020 TRBV6-8A0A0A6YYG3 113 aa9.97□□□□□ -0.81
SND1-203ENST00000463020 ANGP03950 147 aaKnown RBP9.97□□□□□ -0.81
SND1-203ENST00000463020 HERVK_113P61574 105 aa9.97□□□□□ -0.81
SND1-203ENST00000463020 Q6ZRU5 148 aa9.97□□□□□ -0.81
SND1-203ENST00000463020 PCP2Q8IVA1 136 aa9.97□□□□□ -0.81
SND1-203ENST00000463020 IGIPA6NJ69 53 aa9.96□□□□□ -0.82
SND1-203ENST00000463020 CHTF8P0CG12 524 aa9.96□□□□□ -0.82
SND1-203ENST00000463020 CIRBPQ14011 172 aaKnown RBP9.96□□□□□ -0.82
SND1-203ENST00000463020 NTM-AS1Q6ZSK4 140 aa9.96□□□□□ -0.82
SND1-203ENST00000463020 TRBV7-3A0A075B6L6 115 aa9.95□□□□□ -0.82
SND1-203ENST00000463020 IGKV2D-26A0A0A0MRZ7 120 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms