RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 CYTL1Q9NRR1 136 aa8.8□□□□□ -1
APP-211ENST00000462267 UBE2D4Q9Y2X8 147 aa8.8□□□□□ -1
APP-211ENST00000462267 RAB19A4D1S5 217 aa8.79□□□□□ -1
APP-211ENST00000462267 KRTAP13-2Q52LG2 175 aa8.79□□□□□ -1
APP-211ENST00000462267 NUDT10Q8NFP7 164 aa8.79□□□□□ -1
APP-211ENST00000462267 NUDT11Q96G61 164 aa8.79□□□□□ -1
APP-211ENST00000462267 UMAD1C9J7I0 102 aa8.78□□□□□ -1
APP-211ENST00000462267 NDUFC2-KCTD14E9PQ53 114 aa8.78□□□□□ -1
APP-211ENST00000462267 C9orf129Q5T035 196 aaKnown RBP8.78□□□□□ -1
APP-211ENST00000462267 IGHV3OR16-9A0A0B4J2B5 98 aa8.77□□□□□ -1.01
APP-211ENST00000462267 MANBALQ9NQG1 85 aa8.77□□□□□ -1.01
APP-211ENST00000462267 H2AFB1P0C5Y9 115 aa8.76□□□□□ -1.01
APP-211ENST00000462267 LBHQ53QV2 105 aaPredicted RBP8.76□□□□□ -1.01
APP-211ENST00000462267 Q6ZUT4 128 aa8.76□□□□□ -1.01
APP-211ENST00000462267 LINC00469Q8N7U9 141 aa8.76□□□□□ -1.01
APP-211ENST00000462267 ANAPC11Q9NYG5 84 aa8.76□□□□□ -1.01
APP-211ENST00000462267 TRBV30A0A0K0K1B3 111 aa8.75□□□□□ -1.01
APP-211ENST00000462267 BCE1O60756 84 aa8.75□□□□□ -1.01
APP-211ENST00000462267 FCER1GP30273 86 aa8.75□□□□□ -1.01
APP-211ENST00000462267 FAM229BQ4G0N7 80 aa8.75□□□□□ -1.01
APP-211ENST00000462267 LINC00337Q8N6G1 96 aa8.75□□□□□ -1.01
APP-211ENST00000462267 TIMM21Q9BVV7 248 aa8.75□□□□□ -1.01
APP-211ENST00000462267 KRTAP4-1Q9BYQ7 146 aa8.75□□□□□ -1.01
APP-211ENST00000462267 C22orf24Q9Y442 160 aa8.75□□□□□ -1.01
APP-211ENST00000462267 TRBV20OR9-2A0A075B6H5 130 aa8.74□□□□□ -1.01
APP-211ENST00000462267 VCYO14598 125 aa8.74□□□□□ -1.01
APP-211ENST00000462267 LINC00242Q5T6M2 205 aa8.74□□□□□ -1.01
APP-211ENST00000462267 GNG13Q9P2W3 67 aa8.74□□□□□ -1.01
APP-211ENST00000462267 KIAA0087Q14695 138 aa8.72□□□□□ -1.01
APP-211ENST00000462267 TMEM18Q96B42 140 aa8.72□□□□□ -1.01
APP-211ENST00000462267 SEC61BP60468 96 aaKnown RBP8.71□□□□□ -1.02
APP-211ENST00000462267 FP248Q71RG6 208 aaPredicted RBP8.71□□□□□ -1.02
APP-211ENST00000462267 SLC51BQ86UW2 128 aa8.71□□□□□ -1.02
APP-211ENST00000462267 PACRGQ96M98 296 aaPredicted RBP8.71□□□□□ -1.02
APP-211ENST00000462267 IGKV2D-26A0A0A0MRZ7 120 aa8.7□□□□□ -1.02
APP-211ENST00000462267 KRTAP9-7A8MTY7 169 aa8.7□□□□□ -1.02
APP-211ENST00000462267 PDE6DO43924 150 aa8.7□□□□□ -1.02
APP-211ENST00000462267 S100A1P23297 94 aa8.7□□□□□ -1.02
APP-211ENST00000462267 KIR2DL4Q99706 377 aa8.7□□□□□ -1.02
APP-211ENST00000462267 MED9Q9NWA0 146 aa8.7□□□□□ -1.02
APP-211ENST00000462267 S100A6P06703 90 aa8.69□□□□□ -1.02
APP-211ENST00000462267 CFC1BP0CG36 223 aa8.69□□□□□ -1.02
APP-211ENST00000462267 C2orf82Q6UX34 121 aa8.69□□□□□ -1.02
APP-211ENST00000462267 TP73-AS1Q9UF72 201 aa8.69□□□□□ -1.02
APP-211ENST00000462267 A6NJY4 79 aa8.68□□□□□ -1.02
APP-211ENST00000462267 KRTAP13-3Q3SY46 172 aa8.68□□□□□ -1.02
APP-211ENST00000462267 TMEM191AQ9H0A3 160 aa8.68□□□□□ -1.02
APP-211ENST00000462267 TGIF2-C20orf24A0A0A6YYL0 155 aa8.67□□□□□ -1.02
APP-211ENST00000462267 PPP1R17O96001 155 aa8.67□□□□□ -1.02
APP-211ENST00000462267 RAB4AP20338 218 aa8.67□□□□□ -1.02
APP-211ENST00000462267 LCE2CQ5TA81 110 aa8.67□□□□□ -1.02
APP-211ENST00000462267 MRPL55Q7Z7F7 128 aaKnown RBP8.67□□□□□ -1.02
APP-211ENST00000462267 ZNF727A8MUV8 499 aa8.66□□□□□ -1.02
APP-211ENST00000462267 SUMO2P61956 95 aaKnown RBP8.66□□□□□ -1.02
APP-211ENST00000462267 FAM104AQ969W3 186 aa8.66□□□□□ -1.02
APP-211ENST00000462267 BORCS7Q96B45 105 aa8.66□□□□□ -1.02
APP-211ENST00000462267 A8MWL6 223 aa8.65□□□□□ -1.02
APP-211ENST00000462267 K7EN84 100 aa8.65□□□□□ -1.02
APP-211ENST00000462267 HBBP68871 147 aa8.65□□□□□ -1.02
APP-211ENST00000462267 IFITM10A6NMD0 228 aa8.64□□□□□ -1.03
APP-211ENST00000462267 MRPS36P82909 103 aaKnown RBP8.64□□□□□ -1.03
APP-211ENST00000462267 SPAG11AQ6PDA7 123 aa8.64□□□□□ -1.03
APP-211ENST00000462267 KRTAP13-1Q8IUC0 172 aa8.64□□□□□ -1.03
APP-211ENST00000462267 OCC1Q8TAD7 63 aa8.64□□□□□ -1.03
APP-211ENST00000462267 XAGE1AQ9HD64 81 aa8.64□□□□□ -1.03
APP-211ENST00000462267 SPANXA1Q9NS26 97 aa8.64□□□□□ -1.03
APP-211ENST00000462267 PPP1R2P9O14990 202 aa8.63□□□□□ -1.03
APP-211ENST00000462267 GATCO43716 136 aaKnown RBP8.63□□□□□ -1.03
APP-211ENST00000462267 UBE2AP49459 152 aa8.63□□□□□ -1.03
APP-211ENST00000462267 AMN1Q8IY45 258 aa8.63□□□□□ -1.03
APP-211ENST00000462267 A0A1B0GUT8 65 aa8.62□□□□□ -1.03
APP-211ENST00000462267 PRSS47A8MTI9 375 aa8.62□□□□□ -1.03
APP-211ENST00000462267 SMKR1H3BMG3 65 aa8.62□□□□□ -1.03
APP-211ENST00000462267 TEX46H3BTG2 121 aa8.62□□□□□ -1.03
APP-211ENST00000462267 RPL39P62891 51 aaKnown RBP8.62□□□□□ -1.03
APP-211ENST00000462267 MT1HP80294 61 aa8.62□□□□□ -1.03
APP-211ENST00000462267 ANKRD39Q53RE8 183 aa8.62□□□□□ -1.03
APP-211ENST00000462267 ALKAL2Q6UX46 152 aa8.62□□□□□ -1.03
APP-211ENST00000462267 NRACQ8N912 160 aa8.62□□□□□ -1.03
APP-211ENST00000462267 RPL37AP8A6NKH3 93 aa8.61□□□□□ -1.03
APP-211ENST00000462267 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.61□□□□□ -1.03
APP-211ENST00000462267 TCAPO15273 167 aa8.61□□□□□ -1.03
APP-211ENST00000462267 LINC00167Q96N53 147 aa8.61□□□□□ -1.03
APP-211ENST00000462267 CT83Q5H943 113 aa8.6□□□□□ -1.03
APP-211ENST00000462267 LINC01561Q8N1V8 128 aa8.6□□□□□ -1.03
APP-211ENST00000462267 LORP23490 312 aaPredicted RBP8.59□□□□□ -1.03
APP-211ENST00000462267 FAM231DQ6ZW35 169 aa8.59□□□□□ -1.03
APP-211ENST00000462267 CKS1BP61024 79 aa8.58□□□□□ -1.04
APP-211ENST00000462267 BLOC1S1P78537 153 aa8.58□□□□□ -1.04
APP-211ENST00000462267 C20orf78Q9BR46 151 aa8.58□□□□□ -1.04
APP-211ENST00000462267 HIGD1CA8MV81 97 aa8.57□□□□□ -1.04
APP-211ENST00000462267 PRSS2P07478 247 aa8.57□□□□□ -1.04
APP-211ENST00000462267 RPL32P62910 135 aaKnown RBP8.57□□□□□ -1.04
APP-211ENST00000462267 NDUFA5Q16718 116 aa8.57□□□□□ -1.04
APP-211ENST00000462267 KRTAP19-2Q3LHN2 52 aa8.57□□□□□ -1.04
APP-211ENST00000462267 KRTAP10-6P60371 365 aaPredicted RBP8.56□□□□□ -1.04
APP-211ENST00000462267 C3orf22Q8N5N4 141 aa8.56□□□□□ -1.04
APP-211ENST00000462267 TAGLN2P37802 199 aaKnown RBP8.55□□□□□ -1.04
APP-211ENST00000462267 C4orf48Q5BLP8 95 aa8.55□□□□□ -1.04
APP-211ENST00000462267 C6orf226Q5I0X4 101 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms