RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 TMEM190Q8WZ59 177 aa4.26□□□□□ -1.73
CLK1-207ENST00000461981 C22orf24Q9Y442 160 aa4.26□□□□□ -1.73
CLK1-207ENST00000461981 DAD1P61803 113 aa4.26□□□□□ -1.73
CLK1-207ENST00000461981 ZNF625Q96I27 306 aaPredicted RBP4.26□□□□□ -1.73
CLK1-207ENST00000461981 RNF5Q99942 180 aa4.26□□□□□ -1.73
CLK1-207ENST00000461981 C11orf21Q9P2W6 132 aa4.26□□□□□ -1.73
CLK1-207ENST00000461981 TACC2O95359 2948 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 COX7A2LO14548 114 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 IGLV1-47P01700 117 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 PF4P02776 101 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 ENHOQ6UWT2 76 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 PRR15Q8IV56 129 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 LYPD1Q8N2G4 141 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 C4orf3Q8WVX3 66 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 LITAFQ99732 161 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 Q9UF83 564 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 DNAH3Q8TD57 4116 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 CD28P10747 220 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 MRPS36P82909 103 aaKnown RBP4.25□□□□□ -1.73
CLK1-207ENST00000461981 PRB3Q04118 309 aaPredicted RBP4.25□□□□□ -1.73
CLK1-207ENST00000461981 Q8N6K4 173 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 COPS9Q8WXC6 57 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 MRPL53Q96EL3 112 aaKnown RBP4.25□□□□□ -1.73
CLK1-207ENST00000461981 FAM218AQ96MZ4 157 aa4.25□□□□□ -1.73
CLK1-207ENST00000461981 DYNC2H1Q8NCM8 4307 aaKnown RBP4.25□□□□□ -1.73
CLK1-207ENST00000461981 SDHAF1A6NFY7 115 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 IGIPA6NJ69 53 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 H3BRN7 92 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 H3BS24 57 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 CGB3P0DN86 165 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 CGB7P0DN87 165 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 CFHR3Q02985 330 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 ZNF876PQ49A33 203 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 Q6ZRU5 148 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 RBM12B-AS1Q9P1G2 102 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 ATRQ13535 2644 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 IGF1P05019 195 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 IGHV3-30-3P0DP02 117 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 MIAQ16674 131 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 C17orf58Q2M2W7 97 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 C6orf223Q8N319 242 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 IGHV3OR16-8A0A075B7F1 116 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 IGHV7-4-1A0A0J9YVY3 117 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 A0A0J9YXV3 536 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 PLAC8L1A1L4L8 177 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 BUB1B-PAK6H3BSN5 160 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 MUC7Q8TAX7 377 aa4.24□□□□□ -1.73
CLK1-207ENST00000461981 IGKV1-17P01599 117 aa4.23□□□□□ -1.73
CLK1-207ENST00000461981 VSIG2Q96IQ7 327 aa4.23□□□□□ -1.73
CLK1-207ENST00000461981 IGHV3-72A0A0B4J1Y9 119 aa4.23□□□□□ -1.73
CLK1-207ENST00000461981 TRBV27A0A0K0K1C4 114 aa4.23□□□□□ -1.73
CLK1-207ENST00000461981 PRAC2D3DTV9 90 aa4.23□□□□□ -1.73
CLK1-207ENST00000461981 TMEM167AQ8TBQ9 72 aa4.23□□□□□ -1.73
CLK1-207ENST00000461981 NDUFA12Q9UI09 145 aa4.23□□□□□ -1.73
CLK1-207ENST00000461981 STAB1Q9NY15 2570 aa4.23□□□□□ -1.73
CLK1-207ENST00000461981 RPL27AP46776 148 aaKnown RBP4.22□□□□□ -1.73
CLK1-207ENST00000461981 KLK9Q2XQG4 91 aa4.22□□□□□ -1.73
CLK1-207ENST00000461981 UBE2E2Q96LR5 201 aa4.22□□□□□ -1.73
CLK1-207ENST00000461981 TM2D3Q9BRN9 247 aa4.22□□□□□ -1.73
CLK1-207ENST00000461981 C11orf68Q9H3H3 251 aaKnown RBP4.22□□□□□ -1.73
CLK1-207ENST00000461981 KLK9Q9UKQ9 250 aa4.22□□□□□ -1.73
CLK1-207ENST00000461981 APOC4P55056 127 aa4.22□□□□□ -1.73
CLK1-207ENST00000461981 C5orf56Q8N8D9 126 aa4.22□□□□□ -1.73
CLK1-207ENST00000461981 LRCOL1A6NCL2 159 aa4.22□□□□□ -1.73
CLK1-207ENST00000461981 NCR3O14931 201 aa4.22□□□□□ -1.73
CLK1-207ENST00000461981 KLKP1Q107X0 134 aa4.22□□□□□ -1.73
CLK1-207ENST00000461981 C1orf158Q8N1D5 194 aa4.22□□□□□ -1.73
CLK1-207ENST00000461981 C19orf73Q9NVV2 129 aa4.22□□□□□ -1.73
CLK1-207ENST00000461981 CMYA5Q8N3K9 4069 aa4.21□□□□□ -1.73
CLK1-207ENST00000461981 BLCAPP62952 87 aa4.21□□□□□ -1.74
CLK1-207ENST00000461981 C9orf47Q6ZRZ4 202 aa4.21□□□□□ -1.74
CLK1-207ENST00000461981 COX8CQ7Z4L0 72 aa4.21□□□□□ -1.74
CLK1-207ENST00000461981 TMEM141Q96I45 108 aa4.21□□□□□ -1.74
CLK1-207ENST00000461981 CSMD1Q96PZ7 3565 aa4.21□□□□□ -1.74
CLK1-207ENST00000461981 A0A0J9YX75 114 aa4.21□□□□□ -1.74
CLK1-207ENST00000461981 S100A4P26447 101 aaKnown RBP4.21□□□□□ -1.74
CLK1-207ENST00000461981 KRTAP10-11P60412 298 aa4.21□□□□□ -1.74
CLK1-207ENST00000461981 PDE6HQ13956 83 aa4.21□□□□□ -1.74
CLK1-207ENST00000461981 FAM222AQ5U5X8 452 aa4.21□□□□□ -1.74
CLK1-207ENST00000461981 SORL1Q92673 2214 aa4.21□□□□□ -1.74
CLK1-207ENST00000461981 C19orf54Q5BKX5 351 aa4.2□□□□□ -1.74
CLK1-207ENST00000461981 TIMM17AQ99595 171 aa4.2□□□□□ -1.74
CLK1-207ENST00000461981 JMJD1CQ15652 2540 aa4.2□□□□□ -1.74
CLK1-207ENST00000461981 TRAV7A0A075B6U4 112 aa4.2□□□□□ -1.74
CLK1-207ENST00000461981 IGHV3-35A0A0C4DH35 117 aa4.2□□□□□ -1.74
CLK1-207ENST00000461981 RNASE13Q5GAN3 156 aaKnown RBP4.2□□□□□ -1.74
CLK1-207ENST00000461981 PSPHP1O15172 72 aa4.2□□□□□ -1.74
CLK1-207ENST00000461981 NPBQ8NG41 125 aa4.2□□□□□ -1.74
CLK1-207ENST00000461981 PHLDA3Q9Y5J5 127 aa4.2□□□□□ -1.74
CLK1-207ENST00000461981 SMAD5-AS1Q9Y6J3 95 aa4.2□□□□□ -1.74
CLK1-207ENST00000461981 MEGF8Q7Z7M0 2845 aa4.2□□□□□ -1.74
CLK1-207ENST00000461981 TRAV13-2A0A0B4J235 113 aa4.19□□□□□ -1.74
CLK1-207ENST00000461981 A8MU10 97 aa4.19□□□□□ -1.74
CLK1-207ENST00000461981 F5H697 171 aa4.19□□□□□ -1.74
CLK1-207ENST00000461981 SOCS3O14543 225 aa4.19□□□□□ -1.74
CLK1-207ENST00000461981 IGLV1-40P01703 118 aa4.19□□□□□ -1.74
CLK1-207ENST00000461981 IGLV2-23P01705 113 aa4.19□□□□□ -1.74
CLK1-207ENST00000461981 CLEC19AQ6UXS0 136 aa4.19□□□□□ -1.74
CLK1-207ENST00000461981 TRAV10A0A0B4J240 114 aa4.19□□□□□ -1.74
CLK1-207ENST00000461981 TRAV21A0A0B4J279 112 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms