RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 RAB5BP61020 215 aa5.7□□□□□ -1.5
LDB1-203ENST00000461873 SUMO2P61956 95 aaKnown RBP5.7□□□□□ -1.5
LDB1-203ENST00000461873 COX6A2Q02221 97 aa5.7□□□□□ -1.5
LDB1-203ENST00000461873 SERTAD4-AS1Q5TG53 156 aa5.7□□□□□ -1.5
LDB1-203ENST00000461873 ZNF664Q8N3J9 261 aa5.7□□□□□ -1.5
LDB1-203ENST00000461873 PRELID3AQ96N28 172 aa5.7□□□□□ -1.5
LDB1-203ENST00000461873 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.7□□□□□ -1.5
LDB1-203ENST00000461873 NUPR1O60356 82 aa5.69□□□□□ -1.5
LDB1-203ENST00000461873 TSHBP01222 138 aa5.69□□□□□ -1.5
LDB1-203ENST00000461873 NPYP01303 97 aa5.69□□□□□ -1.5
LDB1-203ENST00000461873 CD164L2Q6UWJ8 174 aa5.69□□□□□ -1.5
LDB1-203ENST00000461873 CDC42SE2Q9NRR3 84 aa5.69□□□□□ -1.5
LDB1-203ENST00000461873 MYCBP2O75592 4640 aa5.68□□□□□ -1.5
LDB1-203ENST00000461873 A0A087WYN8 130 aa5.68□□□□□ -1.5
LDB1-203ENST00000461873 GVQW2A0A096LPI5 108 aaPredicted RBP5.68□□□□□ -1.5
LDB1-203ENST00000461873 COX7A2LO14548 114 aa5.68□□□□□ -1.5
LDB1-203ENST00000461873 TNFRSF6BO95407 300 aa5.68□□□□□ -1.5
LDB1-203ENST00000461873 ESDP10768 282 aa5.68□□□□□ -1.5
LDB1-203ENST00000461873 POLR2KP53803 58 aaKnown RBP5.68□□□□□ -1.5
LDB1-203ENST00000461873 FOXI1Q12951 378 aa5.68□□□□□ -1.5
LDB1-203ENST00000461873 MRPL52Q86TS9 123 aaKnown RBP5.68□□□□□ -1.5
LDB1-203ENST00000461873 ORMDL3Q8N138 153 aa5.68□□□□□ -1.5
LDB1-203ENST00000461873 STPG4Q8N801 248 aa5.68□□□□□ -1.5
LDB1-203ENST00000461873 C15orf56Q8N910 161 aa5.68□□□□□ -1.5
LDB1-203ENST00000461873 C18orf32Q8TCD1 76 aa5.68□□□□□ -1.5
LDB1-203ENST00000461873 CARD19Q96LW7 228 aa5.68□□□□□ -1.5
LDB1-203ENST00000461873 C20orf78Q9BR46 151 aa5.68□□□□□ -1.5
LDB1-203ENST00000461873 TRAV13-1A0A0B4J241 112 aa5.67□□□□□ -1.5
LDB1-203ENST00000461873 CHTF8P0CG12 524 aa5.67□□□□□ -1.5
LDB1-203ENST00000461873 SNRPEP62304 92 aaKnown RBP5.67□□□□□ -1.5
LDB1-203ENST00000461873 SYCNQ0VAF6 134 aa5.67□□□□□ -1.5
LDB1-203ENST00000461873 PDZD11Q5EBL8 140 aa5.67□□□□□ -1.5
LDB1-203ENST00000461873 BAGE3Q86Y29 109 aa5.67□□□□□ -1.5
LDB1-203ENST00000461873 NRACQ8N912 160 aa5.67□□□□□ -1.5
LDB1-203ENST00000461873 SPACA4Q8TDM5 124 aa5.67□□□□□ -1.5
LDB1-203ENST00000461873 PPBPP02775 128 aa5.66□□□□□ -1.5
LDB1-203ENST00000461873 IFI27P40305 119 aaPredicted RBP5.66□□□□□ -1.5
LDB1-203ENST00000461873 Q6ZRU5 148 aa5.66□□□□□ -1.5
LDB1-203ENST00000461873 PRSS3P2Q8NHM4 247 aa5.66□□□□□ -1.5
LDB1-203ENST00000461873 URB1-AS1Q96HZ7 61 aa5.66□□□□□ -1.5
LDB1-203ENST00000461873 CAMK2N2Q96S95 79 aa5.66□□□□□ -1.5
LDB1-203ENST00000461873 CSDC2Q9Y534 153 aaKnown RBP5.66□□□□□ -1.5
LDB1-203ENST00000461873 SERF1AO75920 110 aa5.65□□□□□ -1.5
LDB1-203ENST00000461873 SLPIP03973 132 aa5.65□□□□□ -1.5
LDB1-203ENST00000461873 S100A6P06703 90 aa5.65□□□□□ -1.5
LDB1-203ENST00000461873 LINC00310P59036 64 aa5.65□□□□□ -1.5
LDB1-203ENST00000461873 CIRBPQ14011 172 aaKnown RBP5.65□□□□□ -1.5
LDB1-203ENST00000461873 PMCHL1Q16048 86 aa5.65□□□□□ -1.5
LDB1-203ENST00000461873 FAM19A2Q8N3H0 131 aa5.65□□□□□ -1.5
LDB1-203ENST00000461873 MAP1LC3AQ9H492 121 aa5.65□□□□□ -1.5
LDB1-203ENST00000461873 PLAC8Q9NZF1 115 aa5.65□□□□□ -1.5
LDB1-203ENST00000461873 UBE2D4Q9Y2X8 147 aa5.65□□□□□ -1.5
LDB1-203ENST00000461873 IGLV4-69A0A075B6H9 119 aa5.64□□□□□ -1.51
LDB1-203ENST00000461873 LOC107984640A0A0U1RRK4 108 aa5.64□□□□□ -1.51
LDB1-203ENST00000461873 PANO1I0J062 215 aa5.64□□□□□ -1.51
LDB1-203ENST00000461873 GAGE2BQ13066 116 aa5.64□□□□□ -1.51
LDB1-203ENST00000461873 RNASE13Q5GAN3 156 aaKnown RBP5.64□□□□□ -1.51
LDB1-203ENST00000461873 TIMM21Q9BVV7 248 aa5.64□□□□□ -1.51
LDB1-203ENST00000461873 SMIM2Q9BVW6 85 aa5.64□□□□□ -1.51
LDB1-203ENST00000461873 SPANXA1Q9NS26 97 aa5.64□□□□□ -1.51
LDB1-203ENST00000461873 IFITM10A6NMD0 228 aa5.63□□□□□ -1.51
LDB1-203ENST00000461873 LINC00614P0C842 121 aa5.63□□□□□ -1.51
LDB1-203ENST00000461873 RPL18AQ02543 176 aaKnown RBP5.63□□□□□ -1.51
LDB1-203ENST00000461873 Q6ZN92 141 aa5.63□□□□□ -1.51
LDB1-203ENST00000461873 FA2HQ7L5A8 372 aa5.63□□□□□ -1.51
LDB1-203ENST00000461873 C5orf38Q86SI9 138 aa5.63□□□□□ -1.51
LDB1-203ENST00000461873 LINC00526Q96FQ7 95 aa5.63□□□□□ -1.51
LDB1-203ENST00000461873 PLA2G2DQ9UNK4 145 aa5.63□□□□□ -1.51
LDB1-203ENST00000461873 A0A096LNI7 61 aa5.62□□□□□ -1.51
LDB1-203ENST00000461873 C5orf52A6NGY3 159 aa5.62□□□□□ -1.51
LDB1-203ENST00000461873 FABP4P15090 132 aa5.62□□□□□ -1.51
LDB1-203ENST00000461873 G0S2P27469 103 aa5.62□□□□□ -1.51
LDB1-203ENST00000461873 RPL32P62910 135 aaKnown RBP5.62□□□□□ -1.51
LDB1-203ENST00000461873 SPAG11BQ08648 103 aa5.62□□□□□ -1.51
LDB1-203ENST00000461873 Q6ZUT4 128 aa5.62□□□□□ -1.51
LDB1-203ENST00000461873 Q8N8P6 123 aa5.62□□□□□ -1.51
LDB1-203ENST00000461873 C2orf48Q96LS8 159 aa5.62□□□□□ -1.51
LDB1-203ENST00000461873 C2orf88Q9BSF0 95 aa5.62□□□□□ -1.51
LDB1-203ENST00000461873 COA6Q5JTJ3 125 aaKnown RBP5.61□□□□□ -1.51
LDB1-203ENST00000461873 REG3GQ6UW15 175 aa5.61□□□□□ -1.51
LDB1-203ENST00000461873 Q6ZRP5 223 aa5.61□□□□□ -1.51
LDB1-203ENST00000461873 LINC00173Q6ZV60 143 aa5.61□□□□□ -1.51
LDB1-203ENST00000461873 HIST3H2BBQ8N257 126 aa5.61□□□□□ -1.51
LDB1-203ENST00000461873 OR10D4PQ8NGN7 298 aa5.61□□□□□ -1.51
LDB1-203ENST00000461873 ORAOV1Q8WV07 137 aa5.61□□□□□ -1.51
LDB1-203ENST00000461873 LAMTOR2Q9Y2Q5 125 aa5.61□□□□□ -1.51
LDB1-203ENST00000461873 PRSS47A8MTI9 375 aa5.6□□□□□ -1.51
LDB1-203ENST00000461873 F8WDY8 70 aa5.6□□□□□ -1.51
LDB1-203ENST00000461873 NDUFA1O15239 70 aa5.6□□□□□ -1.51
LDB1-203ENST00000461873 HSBP1O75506 76 aa5.6□□□□□ -1.51
LDB1-203ENST00000461873 PTTG1IPP53801 180 aa5.6□□□□□ -1.51
LDB1-203ENST00000461873 KRTAP10-4P60372 401 aaPredicted RBP5.6□□□□□ -1.51
LDB1-203ENST00000461873 RPL39P62891 51 aaKnown RBP5.6□□□□□ -1.51
LDB1-203ENST00000461873 TEX43Q6ZNM6 134 aa5.6□□□□□ -1.51
LDB1-203ENST00000461873 NXT2Q9NPJ8 142 aaKnown RBP5.6□□□□□ -1.51
LDB1-203ENST00000461873 LOC105371267A0A1B0GV96 52 aa5.59□□□□□ -1.51
LDB1-203ENST00000461873 PRSS2P07478 247 aa5.59□□□□□ -1.51
LDB1-203ENST00000461873 S100A2P29034 98 aa5.59□□□□□ -1.51
LDB1-203ENST00000461873 PRR3P79522 188 aaKnown RBP5.59□□□□□ -1.51
LDB1-203ENST00000461873 MRPS36P82909 103 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms