RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 hDV102S1A0JD36 115 aa10.31□□□□□ -0.76
TMEM39A-203ENST00000461654 H3BRM9 83 aa10.31□□□□□ -0.76
TMEM39A-203ENST00000461654 DNAH10OSP0CZ25 163 aa10.31□□□□□ -0.76
TMEM39A-203ENST00000461654 CDPF1Q6NVV7 123 aa10.31□□□□□ -0.76
TMEM39A-203ENST00000461654 FAM19A3Q7Z5A8 133 aa10.31□□□□□ -0.76
TMEM39A-203ENST00000461654 Q8N3U1 123 aa10.31□□□□□ -0.76
TMEM39A-203ENST00000461654 SPATA45Q537H7 98 aa10.3□□□□□ -0.76
TMEM39A-203ENST00000461654 LINC00242Q5T6M2 205 aa10.3□□□□□ -0.76
TMEM39A-203ENST00000461654 CLPSL2Q6UWE3 100 aa10.3□□□□□ -0.76
TMEM39A-203ENST00000461654 LINC00469Q8N7U9 141 aa10.3□□□□□ -0.76
TMEM39A-203ENST00000461654 ZNF22P17026 224 aaPredicted RBP10.28□□□□□ -0.76
TMEM39A-203ENST00000461654 MAJINQ3KP22 176 aa10.28□□□□□ -0.76
TMEM39A-203ENST00000461654 C10orf126Q8N4M7 172 aa10.28□□□□□ -0.76
TMEM39A-203ENST00000461654 STPG4Q8N801 248 aa10.28□□□□□ -0.76
TMEM39A-203ENST00000461654 UBE2WQ96B02 151 aa10.28□□□□□ -0.76
TMEM39A-203ENST00000461654 Q9H8V8 135 aa10.28□□□□□ -0.76
TMEM39A-203ENST00000461654 PRR34Q9NV39 138 aa10.28□□□□□ -0.76
TMEM39A-203ENST00000461654 TRAV8-4A0A0B4J246 113 aa10.27□□□□□ -0.77
TMEM39A-203ENST00000461654 K7EP13 123 aa10.27□□□□□ -0.77
TMEM39A-203ENST00000461654 MIAQ16674 131 aa10.27□□□□□ -0.77
TMEM39A-203ENST00000461654 IGLV5-45A0A087WSX0 123 aa10.26□□□□□ -0.77
TMEM39A-203ENST00000461654 XCL1P47992 114 aa10.26□□□□□ -0.77
TMEM39A-203ENST00000461654 LINC00336Q6ZUF6 198 aa10.26□□□□□ -0.77
TMEM39A-203ENST00000461654 CDKN2A-AS1Q9UH64 79 aa10.26□□□□□ -0.77
TMEM39A-203ENST00000461654 TSTD3H0UI37 97 aa10.25□□□□□ -0.77
TMEM39A-203ENST00000461654 COX6A2Q02221 97 aa10.25□□□□□ -0.77
TMEM39A-203ENST00000461654 ENHOQ6UWT2 76 aa10.25□□□□□ -0.77
TMEM39A-203ENST00000461654 CHCHD10Q8WYQ3 142 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-203ENST00000461654 IGLV10-54A0A075B6I4 117 aa10.24□□□□□ -0.77
TMEM39A-203ENST00000461654 TRAV8-3A0A0A6YYJ7 113 aa10.24□□□□□ -0.77
TMEM39A-203ENST00000461654 TMEM223A0PJW6 202 aa10.24□□□□□ -0.77
TMEM39A-203ENST00000461654 NMUP48645 174 aa10.24□□□□□ -0.77
TMEM39A-203ENST00000461654 ANKRD39Q53RE8 183 aa10.24□□□□□ -0.77
TMEM39A-203ENST00000461654 CD164L2Q6UWJ8 174 aa10.24□□□□□ -0.77
TMEM39A-203ENST00000461654 E9PLD3 99 aa10.23□□□□□ -0.77
TMEM39A-203ENST00000461654 Q6ZR54 194 aa10.23□□□□□ -0.77
TMEM39A-203ENST00000461654 RMI2Q96E14 147 aa10.23□□□□□ -0.77
TMEM39A-203ENST00000461654 DNAH10Q8IVF4 4471 aa10.23□□□□□ -0.77
TMEM39A-203ENST00000461654 FRAS1Q86XX4 4008 aa10.23□□□□□ -0.77
TMEM39A-203ENST00000461654 IBA57-AS1B1ANH7 110 aa10.22□□□□□ -0.77
TMEM39A-203ENST00000461654 SPINK8P0C7L1 97 aa10.22□□□□□ -0.77
TMEM39A-203ENST00000461654 PLEKHB2Q96CS7 222 aa10.22□□□□□ -0.77
TMEM39A-203ENST00000461654 C1orf43Q9BWL3 253 aa10.22□□□□□ -0.77
TMEM39A-203ENST00000461654 IGHV3-64A0A075B6Q5 118 aa10.21□□□□□ -0.77
TMEM39A-203ENST00000461654 IGHV3OR16-9A0A0B4J2B5 98 aa10.21□□□□□ -0.77
TMEM39A-203ENST00000461654 GAGE12HA6NDE8 117 aa10.21□□□□□ -0.77
TMEM39A-203ENST00000461654 COX7A2LO14548 114 aa10.21□□□□□ -0.77
TMEM39A-203ENST00000461654 LEPROTO15243 131 aa10.21□□□□□ -0.77
TMEM39A-203ENST00000461654 MALP21145 153 aa10.21□□□□□ -0.77
TMEM39A-203ENST00000461654 TTC32Q5I0X7 151 aa10.21□□□□□ -0.77
TMEM39A-203ENST00000461654 PRO1933Q9H354 126 aa10.21□□□□□ -0.77
TMEM39A-203ENST00000461654 DNAH6Q9C0G6 4158 aa10.21□□□□□ -0.78
TMEM39A-203ENST00000461654 A0A087WZ39 114 aa10.2□□□□□ -0.78
TMEM39A-203ENST00000461654 IGHV1-58A0A0C4DH39 117 aa10.2□□□□□ -0.78
TMEM39A-203ENST00000461654 LGALS3P17931 250 aaKnown RBP10.2□□□□□ -0.78
TMEM39A-203ENST00000461654 C5orf38Q86SI9 138 aa10.2□□□□□ -0.78
TMEM39A-203ENST00000461654 LINC01561Q8N1V8 128 aa10.2□□□□□ -0.78
TMEM39A-203ENST00000461654 C14orf144Q96I85 54 aa10.2□□□□□ -0.78
TMEM39A-203ENST00000461654 Q9HAA7 133 aa10.2□□□□□ -0.78
TMEM39A-203ENST00000461654 IGKV2D-24A0A075B6R9 120 aa10.19□□□□□ -0.78
TMEM39A-203ENST00000461654 A0A1B0GVY2 172 aa10.19□□□□□ -0.78
TMEM39A-203ENST00000461654 M0R2N4 97 aa10.19□□□□□ -0.78
TMEM39A-203ENST00000461654 RTL8CO15255 209 aa10.19□□□□□ -0.78
TMEM39A-203ENST00000461654 COX8AP10176 69 aa10.19□□□□□ -0.78
TMEM39A-203ENST00000461654 SLC25A34Q6PIV7 304 aa10.19□□□□□ -0.78
TMEM39A-203ENST00000461654 UQCR10Q9UDW1 63 aa10.19□□□□□ -0.78
TMEM39A-203ENST00000461654 IGKV2D-26A0A0A0MRZ7 120 aa10.18□□□□□ -0.78
TMEM39A-203ENST00000461654 SMIM1B2RUZ4 78 aa10.18□□□□□ -0.78
TMEM39A-203ENST00000461654 J3QQQ9 107 aa10.18□□□□□ -0.78
TMEM39A-203ENST00000461654 APOMO95445 188 aa10.18□□□□□ -0.78
TMEM39A-203ENST00000461654 FOXI1Q12951 378 aa10.17□□□□□ -0.78
TMEM39A-203ENST00000461654 COX11Q9Y6N1 276 aa10.17□□□□□ -0.78
TMEM39A-203ENST00000461654 IGLV5-39A0A0G2JS06 123 aa10.16□□□□□ -0.78
TMEM39A-203ENST00000461654 MIEN1Q9BRT3 115 aa10.16□□□□□ -0.78
TMEM39A-203ENST00000461654 TM2D2Q9BX73 214 aa10.16□□□□□ -0.78
TMEM39A-203ENST00000461654 NBDYA0A0U1RRE5 68 aa10.15□□□□□ -0.78
TMEM39A-203ENST00000461654 ZNF815PA8K554 130 aa10.15□□□□□ -0.78
TMEM39A-203ENST00000461654 DLEU1O43261 78 aa10.15□□□□□ -0.78
TMEM39A-203ENST00000461654 PRSS2P07478 247 aa10.15□□□□□ -0.78
TMEM39A-203ENST00000461654 PCP2Q8IVA1 136 aa10.15□□□□□ -0.78
TMEM39A-203ENST00000461654 TOMM7Q9P0U1 55 aa10.15□□□□□ -0.78
TMEM39A-203ENST00000461654 MYMXA0A1B0GTQ4 84 aa10.14□□□□□ -0.79
TMEM39A-203ENST00000461654 BOD1L2Q8IYS8 172 aa10.14□□□□□ -0.79
TMEM39A-203ENST00000461654 COX7B2Q8TF08 81 aa10.14□□□□□ -0.79
TMEM39A-203ENST00000461654 PCP4L1A6NKN8 68 aa10.13□□□□□ -0.79
TMEM39A-203ENST00000461654 C6orf226Q5I0X4 101 aa10.13□□□□□ -0.79
TMEM39A-203ENST00000461654 C1orf134Q5TEV5 83 aa10.13□□□□□ -0.79
TMEM39A-203ENST00000461654 CFAP161Q6P656 301 aa10.13□□□□□ -0.79
TMEM39A-203ENST00000461654 ORAOV1Q8WV07 137 aa10.13□□□□□ -0.79
TMEM39A-203ENST00000461654 HNRNPA3P51991 378 aaKnown RBP10.12□□□□□ -0.79
TMEM39A-203ENST00000461654 TSPEAR-AS2P59090 65 aa10.12□□□□□ -0.79
TMEM39A-203ENST00000461654 SFTA2Q6UW10 78 aa10.12□□□□□ -0.79
TMEM39A-203ENST00000461654 SCGB1D4Q6XE38 83 aa10.12□□□□□ -0.79
TMEM39A-203ENST00000461654 TTTY13Q9BZ97 58 aa10.12□□□□□ -0.79
TMEM39A-203ENST00000461654 NDUFA12Q9UI09 145 aa10.12□□□□□ -0.79
TMEM39A-203ENST00000461654 KRTAP26-1Q6PEX3 210 aa10.11□□□□□ -0.79
TMEM39A-203ENST00000461654 Q8IZM0 81 aa10.11□□□□□ -0.79
TMEM39A-203ENST00000461654 MAPKAPK5-AS1Q8N8E1 139 aa10.11□□□□□ -0.79
TMEM39A-203ENST00000461654 DNAH2Q9P225 4427 aa10.1□□□□□ -0.79
TMEM39A-203ENST00000461654 PSCAO43653 123 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms