RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 PRSS1P07477 247 aa11.34□□□□□ -0.59
MRPL28-207ENST00000461550 SCXQ7RTU7 201 aa11.34□□□□□ -0.59
MRPL28-207ENST00000461550 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.33□□□□□ -0.6
MRPL28-207ENST00000461550 LOC389332A0A1B0GUA5 103 aa11.33□□□□□ -0.6
MRPL28-207ENST00000461550 A0A1B0GUV1 79 aa11.33□□□□□ -0.6
MRPL28-207ENST00000461550 IGKV2-29A2NJV5 120 aaPredicted RBP11.33□□□□□ -0.6
MRPL28-207ENST00000461550 ORAOV1Q8WV07 137 aa11.33□□□□□ -0.6
MRPL28-207ENST00000461550 PAM16Q9Y3D7 125 aa11.33□□□□□ -0.6
MRPL28-207ENST00000461550 DMBT1Q9UGM3 2413 aaPredicted RBP11.33□□□□□ -0.6
MRPL28-207ENST00000461550 FCER1GP30273 86 aa11.32□□□□□ -0.6
MRPL28-207ENST00000461550 IGLC3P0DOY3 106 aa11.32□□□□□ -0.6
MRPL28-207ENST00000461550 SPATA45Q537H7 98 aa11.32□□□□□ -0.6
MRPL28-207ENST00000461550 LINC00528Q8N1L1 170 aa11.32□□□□□ -0.6
MRPL28-207ENST00000461550 SMIM2Q9BVW6 85 aa11.32□□□□□ -0.6
MRPL28-207ENST00000461550 LAMTOR2Q9Y2Q5 125 aa11.32□□□□□ -0.6
MRPL28-207ENST00000461550 MYCBP2O75592 4640 aa11.31□□□□□ -0.6
MRPL28-207ENST00000461550 IGKV3OR2-268A0A0C4DH90 116 aa11.31□□□□□ -0.6
MRPL28-207ENST00000461550 KRTDAPP60985 99 aa11.31□□□□□ -0.6
MRPL28-207ENST00000461550 KIR2DL4Q99706 377 aa11.31□□□□□ -0.6
MRPL28-207ENST00000461550 CHAC1Q9BUX1 264 aa11.31□□□□□ -0.6
MRPL28-207ENST00000461550 NPSP0C0P6 89 aa11.3□□□□□ -0.6
MRPL28-207ENST00000461550 RPL32P62910 135 aaKnown RBP11.3□□□□□ -0.6
MRPL28-207ENST00000461550 MAP1LC3AQ9H492 121 aa11.3□□□□□ -0.6
MRPL28-207ENST00000461550 TRAV8-4A0A0B4J246 113 aa11.29□□□□□ -0.6
MRPL28-207ENST00000461550 CIRBP-AS1Q8TBR5 109 aa11.29□□□□□ -0.6
MRPL28-207ENST00000461550 C18orf32Q8TCD1 76 aa11.29□□□□□ -0.6
MRPL28-207ENST00000461550 HNRNPA3P51991 378 aaKnown RBP11.28□□□□□ -0.6
MRPL28-207ENST00000461550 AMMECR1LQ6DCA0 310 aa11.28□□□□□ -0.6
MRPL28-207ENST00000461550 RNASEKQ6P5S7 137 aaKnown RBP11.28□□□□□ -0.6
MRPL28-207ENST00000461550 PRSS47A8MTI9 375 aa11.27□□□□□ -0.6
MRPL28-207ENST00000461550 C3orf79P0CE67 100 aa11.27□□□□□ -0.6
MRPL28-207ENST00000461550 hDV102S1A0JD36 115 aa11.26□□□□□ -0.61
MRPL28-207ENST00000461550 FGF6P10767 208 aa11.26□□□□□ -0.61
MRPL28-207ENST00000461550 H7C423 109 aa11.25□□□□□ -0.61
MRPL28-207ENST00000461550 PLA2G1BP04054 148 aaKnown RBP11.25□□□□□ -0.61
MRPL28-207ENST00000461550 IFI27P40305 119 aaPredicted RBP11.25□□□□□ -0.61
MRPL28-207ENST00000461550 DGAT2L7PQ6IED9 249 aa11.25□□□□□ -0.61
MRPL28-207ENST00000461550 Q6ZN92 141 aa11.25□□□□□ -0.61
MRPL28-207ENST00000461550 Q8N8P6 123 aa11.25□□□□□ -0.61
MRPL28-207ENST00000461550 GAGE12HA6NDE8 117 aa11.25□□□□□ -0.61
MRPL28-207ENST00000461550 C9orf163Q8N9P6 203 aa11.25□□□□□ -0.61
MRPL28-207ENST00000461550 HERC1Q15751 4861 aa11.24□□□□□ -0.61
MRPL28-207ENST00000461550 PRSS3P2Q8NHM4 247 aa11.24□□□□□ -0.61
MRPL28-207ENST00000461550 PANO1I0J062 215 aa11.23□□□□□ -0.61
MRPL28-207ENST00000461550 RPL39P62891 51 aaKnown RBP11.23□□□□□ -0.61
MRPL28-207ENST00000461550 BATFQ16520 125 aa11.23□□□□□ -0.61
MRPL28-207ENST00000461550 URB1-AS1Q96HZ7 61 aa11.23□□□□□ -0.61
MRPL28-207ENST00000461550 NXT2Q9NPJ8 142 aaKnown RBP11.23□□□□□ -0.61
MRPL28-207ENST00000461550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.23□□□□□ -0.61
MRPL28-207ENST00000461550 SLPIP03973 132 aa11.22□□□□□ -0.61
MRPL28-207ENST00000461550 STPG4Q8N801 248 aa11.22□□□□□ -0.61
MRPL28-207ENST00000461550 C15orf56Q8N910 161 aa11.22□□□□□ -0.61
MRPL28-207ENST00000461550 CHCHD10Q8WYQ3 142 aaPredicted RBP11.22□□□□□ -0.61
MRPL28-207ENST00000461550 CHCHD1Q96BP2 118 aaKnown RBP11.22□□□□□ -0.61
MRPL28-207ENST00000461550 TMEM101Q96IK0 257 aa11.22□□□□□ -0.61
MRPL28-207ENST00000461550 HSBP1O75506 76 aa11.21□□□□□ -0.61
MRPL28-207ENST00000461550 UBE2V1Q13404 147 aa11.21□□□□□ -0.61
MRPL28-207ENST00000461550 OR5A1Q8NGJ0 315 aa11.21□□□□□ -0.61
MRPL28-207ENST00000461550 CNBPP62633 177 aaKnown RBP11.2□□□□□ -0.62
MRPL28-207ENST00000461550 HIGD2BQ4VC39 106 aa11.2□□□□□ -0.62
MRPL28-207ENST00000461550 SDIM1Q6ZPB5 146 aa11.2□□□□□ -0.62
MRPL28-207ENST00000461550 FA2HQ7L5A8 372 aa11.2□□□□□ -0.62
MRPL28-207ENST00000461550 AP5S1Q9NUS5 200 aa11.2□□□□□ -0.62
MRPL28-207ENST00000461550 UBE2D4Q9Y2X8 147 aa11.2□□□□□ -0.62
MRPL28-207ENST00000461550 LINC01546A6NGU7 62 aa11.19□□□□□ -0.62
MRPL28-207ENST00000461550 PTTG1IPP53801 180 aa11.19□□□□□ -0.62
MRPL28-207ENST00000461550 KRTAP10-4P60372 401 aaPredicted RBP11.19□□□□□ -0.62
MRPL28-207ENST00000461550 RNASE13Q5GAN3 156 aaKnown RBP11.19□□□□□ -0.62
MRPL28-207ENST00000461550 CDC42SE2Q9NRR3 84 aa11.19□□□□□ -0.62
MRPL28-207ENST00000461550 XCL1P47992 114 aa11.18□□□□□ -0.62
MRPL28-207ENST00000461550 ORMDL2Q53FV1 153 aa11.18□□□□□ -0.62
MRPL28-207ENST00000461550 FOXI1Q12951 378 aa11.17□□□□□ -0.62
MRPL28-207ENST00000461550 ANKRD39Q53RE8 183 aa11.17□□□□□ -0.62
MRPL28-207ENST00000461550 OPRPNQ99935 248 aaPredicted RBP11.17□□□□□ -0.62
MRPL28-207ENST00000461550 IGHV3-64A0A075B6Q5 118 aa11.16□□□□□ -0.62
MRPL28-207ENST00000461550 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.16□□□□□ -0.62
MRPL28-207ENST00000461550 LINC00959A0A1B0GUT2 108 aa11.16□□□□□ -0.62
MRPL28-207ENST00000461550 K7EMI3 77 aa11.16□□□□□ -0.62
MRPL28-207ENST00000461550 CHTF8P0CG12 524 aa11.16□□□□□ -0.62
MRPL28-207ENST00000461550 SMAGPQ0VAQ4 97 aa11.16□□□□□ -0.62
MRPL28-207ENST00000461550 CFAP161Q6P656 301 aa11.16□□□□□ -0.62
MRPL28-207ENST00000461550 C2orf66Q6UXQ4 117 aa11.16□□□□□ -0.62
MRPL28-207ENST00000461550 Q6ZUT4 128 aa11.16□□□□□ -0.62
MRPL28-207ENST00000461550 FAM19A2Q8N3H0 131 aa11.16□□□□□ -0.62
MRPL28-207ENST00000461550 TIMM21Q9BVV7 248 aa11.16□□□□□ -0.62
MRPL28-207ENST00000461550 CCL25O15444 150 aa11.15□□□□□ -0.62
MRPL28-207ENST00000461550 PET117Q6UWS5 81 aa11.15□□□□□ -0.62
MRPL28-207ENST00000461550 CSDC2Q9Y534 153 aaKnown RBP11.15□□□□□ -0.62
MRPL28-207ENST00000461550 PCP4P48539 62 aa11.14□□□□□ -0.63
MRPL28-207ENST00000461550 FAM104AQ969W3 186 aa11.14□□□□□ -0.63
MRPL28-207ENST00000461550 PMCHL2Q9BQD1 86 aa11.14□□□□□ -0.63
MRPL28-207ENST00000461550 SPANXA1Q9NS26 97 aa11.14□□□□□ -0.63
MRPL28-207ENST00000461550 CYSLTR1Q9Y271 337 aa11.14□□□□□ -0.63
MRPL28-207ENST00000461550 A0A096LNJ9 63 aa11.12□□□□□ -0.63
MRPL28-207ENST00000461550 RPL37AP61513 92 aaKnown RBP11.12□□□□□ -0.63
MRPL28-207ENST00000461550 LINC00526Q96FQ7 95 aa11.12□□□□□ -0.63
MRPL28-207ENST00000461550 GVQW2A0A096LPI5 108 aaPredicted RBP11.12□□□□□ -0.63
MRPL28-207ENST00000461550 J3QL48 77 aa11.12□□□□□ -0.63
MRPL28-207ENST00000461550 HINT1P49773 126 aaPredicted RBP11.12□□□□□ -0.63
MRPL28-207ENST00000461550 CIRBPQ14011 172 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms