RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 FAM74A3Q4VXF1 159 aa5.42□□□□□ -1.54
HDAC9-220ENST00000461409 SPINK6Q6UWN8 80 aa5.42□□□□□ -1.54
HDAC9-220ENST00000461409 Q6ZRP5 223 aa5.42□□□□□ -1.54
HDAC9-220ENST00000461409 NUP35Q8NFH5 326 aa5.42□□□□□ -1.54
HDAC9-220ENST00000461409 TMEM18Q96B42 140 aa5.42□□□□□ -1.54
HDAC9-220ENST00000461409 NAT8BQ9UHF3 227 aa5.42□□□□□ -1.54
HDAC9-220ENST00000461409 V9GYV3 84 aa5.42□□□□□ -1.54
HDAC9-220ENST00000461409 IGLV4-69A0A075B6H9 119 aa5.41□□□□□ -1.54
HDAC9-220ENST00000461409 TRAV13-1A0A0B4J241 112 aa5.41□□□□□ -1.54
HDAC9-220ENST00000461409 A0A1B0GW15 77 aa5.41□□□□□ -1.54
HDAC9-220ENST00000461409 SMKR1H3BMG3 65 aa5.41□□□□□ -1.54
HDAC9-220ENST00000461409 APOMO95445 188 aa5.41□□□□□ -1.54
HDAC9-220ENST00000461409 SRP19P09132 144 aaKnown RBP5.41□□□□□ -1.54
HDAC9-220ENST00000461409 TMEM241Q24JQ0 296 aa5.41□□□□□ -1.54
HDAC9-220ENST00000461409 NRACQ8N912 160 aa5.41□□□□□ -1.54
HDAC9-220ENST00000461409 C20orf78Q9BR46 151 aa5.41□□□□□ -1.54
HDAC9-220ENST00000461409 TIMM21Q9BVV7 248 aa5.41□□□□□ -1.54
HDAC9-220ENST00000461409 UBE2D4Q9Y2X8 147 aa5.41□□□□□ -1.54
HDAC9-220ENST00000461409 A0A0J9YXV3 536 aa5.4□□□□□ -1.54
HDAC9-220ENST00000461409 LINC00862A6NCI5 91 aa5.4□□□□□ -1.54
HDAC9-220ENST00000461409 GAGE2BQ13066 116 aa5.4□□□□□ -1.54
HDAC9-220ENST00000461409 FAM104BQ5XKR9 115 aa5.4□□□□□ -1.54
HDAC9-220ENST00000461409 C2orf48Q96LS8 159 aa5.4□□□□□ -1.54
HDAC9-220ENST00000461409 CAMK2N2Q96S95 79 aa5.4□□□□□ -1.54
HDAC9-220ENST00000461409 TRBV24-1A0A075B6N3 115 aa5.39□□□□□ -1.55
HDAC9-220ENST00000461409 SMIM27A0A1W2PRY6 76 aa5.39□□□□□ -1.55
HDAC9-220ENST00000461409 F8W036 122 aa5.39□□□□□ -1.55
HDAC9-220ENST00000461409 S100A8P05109 93 aa5.39□□□□□ -1.55
HDAC9-220ENST00000461409 CKS2P33552 79 aa5.39□□□□□ -1.55
HDAC9-220ENST00000461409 RPL23P62829 140 aaKnown RBP5.39□□□□□ -1.55
HDAC9-220ENST00000461409 RPL32P62910 135 aaKnown RBP5.39□□□□□ -1.55
HDAC9-220ENST00000461409 ADIRFQ15847 76 aa5.39□□□□□ -1.55
HDAC9-220ENST00000461409 MRPL51Q4U2R6 128 aaKnown RBP5.39□□□□□ -1.55
HDAC9-220ENST00000461409 RNASE13Q5GAN3 156 aaKnown RBP5.39□□□□□ -1.55
HDAC9-220ENST00000461409 Q6ZUT4 128 aa5.39□□□□□ -1.55
HDAC9-220ENST00000461409 OR10D4PQ8NGN7 298 aa5.39□□□□□ -1.55
HDAC9-220ENST00000461409 NAT8Q9UHE5 227 aa5.39□□□□□ -1.55
HDAC9-220ENST00000461409 TNXBP22105 4242 aa5.38□□□□□ -1.55
HDAC9-220ENST00000461409 F8WDY8 70 aa5.38□□□□□ -1.55
HDAC9-220ENST00000461409 RPL18AQ02543 176 aaKnown RBP5.38□□□□□ -1.55
HDAC9-220ENST00000461409 SPAG11BQ08648 103 aa5.38□□□□□ -1.55
HDAC9-220ENST00000461409 SRSF9Q13242 221 aaKnown RBP eCLIP5.38□□□□□ -1.55
HDAC9-220ENST00000461409 C5orf38Q86SI9 138 aa5.38□□□□□ -1.55
HDAC9-220ENST00000461409 SPANXA1Q9NS26 97 aa5.38□□□□□ -1.55
HDAC9-220ENST00000461409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.37□□□□□ -1.55
HDAC9-220ENST00000461409 TNFRSF6BO95407 300 aa5.37□□□□□ -1.55
HDAC9-220ENST00000461409 PPBPP02775 128 aa5.37□□□□□ -1.55
HDAC9-220ENST00000461409 MT-ND6P03923 174 aa5.37□□□□□ -1.55
HDAC9-220ENST00000461409 HBBP68871 147 aa5.37□□□□□ -1.55
HDAC9-220ENST00000461409 PEA15Q15121 130 aa5.37□□□□□ -1.55
HDAC9-220ENST00000461409 SMIM2Q9BVW6 85 aa5.37□□□□□ -1.55
HDAC9-220ENST00000461409 SMDT1Q9H4I9 107 aa5.37□□□□□ -1.55
HDAC9-220ENST00000461409 A0A1W2PNN7 141 aa5.36□□□□□ -1.55
HDAC9-220ENST00000461409 D6R8Y8 96 aa5.36□□□□□ -1.55
HDAC9-220ENST00000461409 KRTAP10-8P60410 259 aa5.36□□□□□ -1.55
HDAC9-220ENST00000461409 RPL39P62891 51 aaKnown RBP5.36□□□□□ -1.55
HDAC9-220ENST00000461409 MRPS36P82909 103 aaKnown RBP5.36□□□□□ -1.55
HDAC9-220ENST00000461409 C9orf116Q5BN46 136 aaPredicted RBP5.36□□□□□ -1.55
HDAC9-220ENST00000461409 ORAOV1Q8WV07 137 aa5.36□□□□□ -1.55
HDAC9-220ENST00000461409 IMMP2LQ96T52 175 aa5.36□□□□□ -1.55
HDAC9-220ENST00000461409 MRPL35Q9NZE8 188 aaKnown RBP5.36□□□□□ -1.55
HDAC9-220ENST00000461409 LRP2P98164 4655 aa5.36□□□□□ -1.55
HDAC9-220ENST00000461409 IGHV3OR16-9A0A0B4J2B5 98 aa5.35□□□□□ -1.55
HDAC9-220ENST00000461409 IFITM10A6NMD0 228 aa5.35□□□□□ -1.55
HDAC9-220ENST00000461409 C9JQL5 133 aa5.35□□□□□ -1.55
HDAC9-220ENST00000461409 NDUFA1O15239 70 aa5.35□□□□□ -1.55
HDAC9-220ENST00000461409 RAB5AP20339 215 aa5.35□□□□□ -1.55
HDAC9-220ENST00000461409 MRPL54Q6P161 138 aaKnown RBP5.35□□□□□ -1.55
HDAC9-220ENST00000461409 PSORS1C2Q9UIG4 136 aa5.35□□□□□ -1.55
HDAC9-220ENST00000461409 TGIF2-C20orf24A0A0A6YYL0 155 aa5.34□□□□□ -1.55
HDAC9-220ENST00000461409 A0A1B0GXF2 115 aa5.34□□□□□ -1.55
HDAC9-220ENST00000461409 ATP5L2Q7Z4Y8 100 aa5.34□□□□□ -1.55
HDAC9-220ENST00000461409 ORMDL3Q8N138 153 aa5.34□□□□□ -1.55
HDAC9-220ENST00000461409 OPRPNQ99935 248 aaPredicted RBP5.34□□□□□ -1.55
HDAC9-220ENST00000461409 RNF213Q63HN8 5207 aa5.33□□□□□ -1.56
HDAC9-220ENST00000461409 NPYP01303 97 aa5.33□□□□□ -1.56
HDAC9-220ENST00000461409 IFI27P40305 119 aaPredicted RBP5.33□□□□□ -1.56
HDAC9-220ENST00000461409 C1orf137Q5JT78 98 aa5.33□□□□□ -1.56
HDAC9-220ENST00000461409 DIRC1Q969H9 104 aa5.33□□□□□ -1.56
HDAC9-220ENST00000461409 A0A087WZ39 114 aa5.32□□□□□ -1.56
HDAC9-220ENST00000461409 TLX1NBP0CAT3 122 aa5.32□□□□□ -1.56
HDAC9-220ENST00000461409 ODF1Q14990 250 aa5.32□□□□□ -1.56
HDAC9-220ENST00000461409 PHF5AQ7RTV0 110 aaKnown RBP5.32□□□□□ -1.56
HDAC9-220ENST00000461409 FAM104AQ969W3 186 aa5.32□□□□□ -1.56
HDAC9-220ENST00000461409 LAMTOR2Q9Y2Q5 125 aa5.32□□□□□ -1.56
HDAC9-220ENST00000461409 PYGO1Q9Y3Y4 419 aa5.32□□□□□ -1.56
HDAC9-220ENST00000461409 IGLV7-43P04211 117 aa5.31□□□□□ -1.56
HDAC9-220ENST00000461409 C10orf25Q5T742 122 aa5.31□□□□□ -1.56
HDAC9-220ENST00000461409 UNQ6190/PRO20217Q6UXQ8 127 aa5.31□□□□□ -1.56
HDAC9-220ENST00000461409 TMEM136Q6ZRR5 245 aa5.31□□□□□ -1.56
HDAC9-220ENST00000461409 TMEM141Q96I45 108 aa5.31□□□□□ -1.56
HDAC9-220ENST00000461409 PRELID3AQ96N28 172 aa5.31□□□□□ -1.56
HDAC9-220ENST00000461409 C2orf88Q9BSF0 95 aa5.31□□□□□ -1.56
HDAC9-220ENST00000461409 IGLV4-3A0A075B6K6 122 aa5.3□□□□□ -1.56
HDAC9-220ENST00000461409 TRBV30A0A0K0K1B3 111 aa5.3□□□□□ -1.56
HDAC9-220ENST00000461409 GAGE2EQ4V326 116 aa5.3□□□□□ -1.56
HDAC9-220ENST00000461409 LINC00242Q5T6M2 205 aa5.3□□□□□ -1.56
HDAC9-220ENST00000461409 Q6ZN92 141 aa5.3□□□□□ -1.56
HDAC9-220ENST00000461409 TEX43Q6ZNM6 134 aa5.3□□□□□ -1.56
HDAC9-220ENST00000461409 FAM19A5Q7Z5A7 132 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms